Prioritize and Delete Erroneous Taxa in a Large Phylogenetic
Tree
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Documentation for package ‘Apoderoides’ version 3.0.0
Help Pages
| autoDeletion | autoDeletion |
| calc.Score | calc.Score |
| calcIntScore_C | Internal Apoderoides Functions |
| calcOutScore_C | Internal Apoderoides Functions |
| deleteAnomaly | deleteAnomaly |
| deleteSubFunc | Internal Apoderoides Functions |
| extractOTUbyRankName_C | Internal Apoderoides Functions |
| findSubTips_C | Internal Apoderoides Functions |
| findUpperNode | Internal Apoderoides Functions |
| get.upperRank | get.upperRank |
| getAllCentroids | getAllCentroids |
| getAllCentroids_C | Internal Apoderoides Functions |
| getAllMRCAs | getAllMRCAs |
| getAllRankNames | Internal Apoderoides Functions |
| getRankCentroid_C | Internal Apoderoides Functions |
| getRankMRCA | Internal Apoderoides Functions |
| getTipNo_C | Internal Apoderoides Functions |
| is.monophyleticByRank | Internal Apoderoides Functions |
| testRankList | testRankList |
| testTree | testTree |