SEER and Atomic Bomb Survivor Data Analysis Tools

Documentation for package ‘SEERaBomb’ version 2019.2

SEERaBomb-package	SEER and A-Bomb Data Analysis Tools
csd	Cancer risk vs years Since Diagnosis of other cancer
esd	Event vs years Since Diagnosis
getDF	Converts a seerSet$L series to a data.frame
getFields	Get fields from SEER SAS file
incidAbomb	Computes A-bomb incidences
incidSEER	Computes SEER incidences
mapCancs	Map ICD9 and ICD-O3 codes to cancers
mapCODs	Map CODs to strings
mapRegs	Map registry codes to acronyms
mapTrts	Map treatment codes to factor
mk2D	Make 2D-spline fits of incidences
mkAbomb	Make Abomb Binaries
mkDemographics	Make Demographics Tables
mkExcelCsd	Make RR Excel file from csd output
mkLT	Make Life Tables
mkMrt	Make mortality binaries
mkMrtLocal	Make mortality binaries from local HMD data files
mkSEER	Make R binaries of SEER data.
msd	Mortality vs years Since Diagnosis
nvsr	National Vital Statistic Report (nvsr) Data
nvsr01	National Vital Statistic Report (nvsr01) Data
p2s	Primary to Secondary
pickFields	Pick SEER fields of interest
plot2D	Plot 2D cancer incidence splines
riskVsAge	Second cancer risk vs attained age after first cancer
seerSet	Join SEER cancers and PY
seerStats	Summarize SEER data.
Sigurdson	Chromosome translocation versus age data
simSeerSet	Simulate SEER cancers and population person years
simSurv	Simulate Survival Times
stdUS	The standard population of the US in 2000
summary.seerSet	Summary of seerSet object