Antedependence Models for Longitudinal Data

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Documentation for package ‘antedep’ version 0.1.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

aic_cat	Akaike information criterion for fitted categorical AD models
aic_gau	Akaike information criterion for fitted Gaussian AD models
aic_inad	Akaike information criterion for fitted INAD models
Bell	The Bell distribution
bic_cat	Bayesian information criterion for fitted categorical AD models
bic_gau	Bayesian information criterion for fitted Gaussian AD models
bic_inad	Bayesian information criterion for fitted INAD models
bic_order_cat	BIC-based order selection for categorical AD models
bic_order_gau	BIC-based order selection for Gaussian AD models
bic_order_inad	BIC-based order selection for INAD models
bolus_inad	Morphine bolus analgesia counts
cattle_growth	Cattle growth data (Treatments A and B)
ci_cat	Confidence intervals for fitted categorical AD models
ci_gau	Confidence intervals for fitted Gaussian AD models
ci_inad	Confidence intervals for fitted INAD models
cochlear_implant	Cochlear implant speech recognition data
dbell	The Bell distribution
em_cat	EM algorithm for categorical AD model estimation
em_gau	EM algorithm for Gaussian AD model estimation
em_inad	EM algorithm for INAD model estimation
fit_cat	Fit categorical antedependence model by maximum likelihood
fit_gau	Fit Gaussian antedependence model by maximum likelihood
fit_inad	Fit INAD antedependence model by maximum likelihood
labor_force_cat	Labor force longitudinal categorical data (Table 1)
logL_cat	Log-likelihood for categorical AD models (with missing data support)
logL_gau	Log-likelihood for Gaussian AD models (with missing data support)
logL_inad	Log-likelihood for INAD models (with missing data support)
logL_inad_i	INAD log likelihood contribution at time i (no fixed effect)
partial_corr	Compute intervenor-adjusted partial correlation matrix
pbell	The Bell distribution
plot_prism	PRISM plot (Partial Residual Intervenor Scatterplot Matrix)
plot_profile	Profile plot (spaghetti plot) for longitudinal data
print.cat_ci	Print method for cat_ci objects
print.cat_fit	Print method for cat_fit objects
print.cat_lrt	Print method for cat_lrt objects
print.gau_bic_order	Print method for BIC order selection
print.gau_ci	Print method for AD confidence intervals
print.gau_contrast_test	Print method for AD contrast test
print.gau_fit	Print method for gau_fit objects
print.gau_homogeneity_test	Print method for AD homogeneity test
print.gau_mean_test	Print method for AD mean test
print.gau_order_test	Print method for AD order test
print.homogeneity_tests_inad	Print method for homogeneity_tests_inad
print.inad_ci	Print method for INAD confidence intervals
print.inad_fit	Print method for INAD model fits
print.test_homogeneity_inad	Print method for test_homogeneity_inad
qbell	The Bell distribution
race_100km	100km race split-time data
rbell	The Bell distribution
run_homogeneity_tests_inad	Run all homogeneity tests for INAD
run_order_tests_cat	Run all pairwise order tests
run_stationarity_tests_cat	Run all stationarity-related tests for categorical AD
run_stationarity_tests_gau	Run all stationarity-related tests for Gaussian AD
run_stationarity_tests_inad	Run all stationarity-related tests for INAD
simulate_cat	Simulate categorical antedependence series
simulate_gau	Simulate Gaussian antedependence series
simulate_inad	Simulate INAD antedependence series
summary.cat_ci	Summary method for cat_ci objects
summary.gau_ci	Summary method for gau_ci objects
summary.inad_ci	Summary method for inad_ci objects
test_contrast_gau	Test linear hypotheses on the mean under antedependence
test_homogeneity_cat	Likelihood ratio test for homogeneity across groups (categorical AD data)
test_homogeneity_gau	Likelihood ratio test for homogeneity across groups (Gaussian AD data)
test_homogeneity_inad	Likelihood ratio test for homogeneity across groups (INAD data)
test_one_sample_gau	One-sample test for mean structure under antedependence
test_order_cat	Likelihood ratio test for antedependence order (categorical AD data)
test_order_gau	Likelihood ratio test for antedependence order (Gaussian AD data)
test_order_inad	Likelihood ratio test for antedependence order (INAD data)
test_stationarity_cat	Likelihood ratio test for stationarity (categorical AD data)
test_stationarity_gau	Likelihood ratio test for stationarity (Gaussian AD data)
test_stationarity_inad	Likelihood ratio test for stationarity (INAD data)
test_timeinvariance_cat	Likelihood ratio test for time-invariance (categorical data)
test_two_sample_gau	Two-sample test for equality of mean profiles under antedependence