Analysis and Simulation of Plant Disease Progress Curves

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Documentation for package ‘epifitter’ version 1.0.0

• DESCRIPTION file
• User guides, package vignettes and other documentation
• Package NEWS
• Package README

Help Pages

AUDPC	Area under the disease progress curve
AUDPC_2_points	Estimate AUDPC from two observations
AUDPS	Area under the disease progress stairs
expo_fun	Exponential model differential equation
fit_lin	Fit epidemic models using linearization
fit_multi	Fit models to multiple disease progress curves
fit_nlin	Fit epidemic models using nonlinear regression
fit_nlin2	Fit epidemic models and estimate the asymptote
gompi_fun	Gompertz model differential equation
logi_fun	Logistic model differential equation
mono_fun	Monomolecular model differential equation
plot_fit	Plot fitted epidemic models
PowderyMildew	Powdery mildew disease progress curves in organic tomato
print.fit_lin	Print fitted model summaries
print.fit_nlin2	Print fitted model summaries with asymptote estimates
sim_exponential	Simulate an exponential disease progress curve
sim_gompertz	Simulate a Gompertz disease progress curve
sim_logistic	Simulate a logistic disease progress curve
sim_monomolecular	Simulate a monomolecular disease progress curve