Bridging Simultaneous Confidence Corridors and PET Neuroimaging

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Documentation for package ‘neuroSCC’ version 1.0.2

• DESCRIPTION file
• User guides, package vignettes and other documentation
• Package NEWS
• Package README

Help Pages

neuroSCC-package	Wrappers for Neuroimaging Functional Data Preparation and SCC Analysis
calculateMetrics	Evaluate SCC or SPM Detection Performance
calculateMetricsExample	Precomputed Inputs for SCC vs. SPM Performance Evaluation
databaseCreator	Create a Database of Processed PET Image Data
generatePoissonClones	Generate Synthetic Poisson Clones for PET Data
generatePoissonClonesExample	Example Input for Poisson Clone Generation
getDimensions	Get Dimensions from a Neuroimaging File
getPoints	Extract Significant SCC Points from an SCC Comparison Object
getSPMbinary	Extract SPM-Detected Significant Points from a Binary NIfTI File
matrixCreator	Convert Database to Functional Data Matrix Format
meanNormalization	Mean Normalization for Matrix Data
neuroCleaner	Clean and Load Data from NIfTI Neuroimaging Files
neuroContour	Obtain neuroimaging contours from a NIFTI file
neuroSCC	Wrappers for Neuroimaging Functional Data Preparation and SCC Analysis
plotSCCcomparisonPanel	Plot group means and SCC comparison overlay
plotSCCpanel	Plot SCC bands and mean estimate for a single group
plotValidationPanel	Plot ROI, SCC detections, and SPM detections for validation
processROIs	Process ROI Voxel Data from a NIfTI File
SCCcomp	Example SCC Computation Result
sccOneGroup	Example SCC object for one-group analysis