Interactive Plotting of Three-Way Differential Expression Analysis


[Up] [Top]

Documentation for package ‘volcano3D’ version 1.2.0

Help Pages

boxplot_trio Boxplot to compare groups
grid-class An S4 class to define the polar grid coordinates system.
polar-class An S4 class to define the polar coordinates and pvalues for polar differential expression plots
polar_coords Coordinates for Three Way Polar Plot
polar_grid Grid required for 3D volcano plot and 2D radial plots
radial_ggplot 'Ggplot' for Three Way Polar Plot
radial_plotly Three-way radial comparison Polar Plot (using plotly)
show_grid Plots grid objects for inspection using plotly
significance_subset Extract a subset population
syn_example_meta PEAC synovial sample data
syn_example_p Synovial differential expression of genes across pathotypes in PEAC cohort
syn_example_rld PEAC synovial gene expression data
volcano3D Three-Dimensional Volcano Plot
volcano_plot Creates a single volcano plot
volcano_trio Volcano Plots for a three-way comparison