Tidy Utilities for Observational Medical Outcomes Partnership Common Data Model Workflows

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Documentation for package ‘tidyOhdsiSolutions’ version 0.1.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

as_mapper	Convert Input to a Mapping Function
buildConceptSetQueries	Resolve Multiple Concept Sets to SQL
buildConceptSetQuery	Build SQL to resolve a concept set expression without Java/CirceR
cohortFromConceptSet	Create a CirceR-compatible cohort definition from multiple concept set expressions
cohortToJson	Serialize a Cohort Expression to JSON
collectCsFromCohort	Extract Concept Set Expressions from a Cohort Definition
createConceptSetCohort	Create a CirceR-compatible cohort definition from a concept set expression
imap	Apply a Function to Each Element with Its Index or Name
imap_chr	Apply a Function to Each Element with Its Index or Name
imap_dbl	Apply a Function to Each Element with Its Index or Name
imap_dfr	Apply a Function to Each Element with Its Index or Name
map	Apply a Function to Each Element of a List or Vector
map2	Apply a Function to Pairs of Elements from Two Lists
map2_chr	Apply a Function to Pairs of Elements from Two Lists
map2_dbl	Apply a Function to Pairs of Elements from Two Lists
map2_dfc	Apply a Function to Pairs of Elements from Two Lists
map2_dfr	Apply a Function to Pairs of Elements from Two Lists
map2_int	Apply a Function to Pairs of Elements from Two Lists
map2_lgl	Apply a Function to Pairs of Elements from Two Lists
map_chr	Apply a Function to Each Element of a List or Vector
map_dbl	Apply a Function to Each Element of a List or Vector
map_dfc	Apply a Function to Each Element of a List or Vector
map_dfr	Apply a Function to Each Element of a List or Vector
map_int	Apply a Function to Each Element of a List or Vector
map_lgl	Apply a Function to Each Element of a List or Vector
msg_abort	Stop with a styled error message
msg_blank	Print a blank line
msg_bullet	Print a bullet point
msg_danger	Print a danger / error message (styled, non-stopping)
msg_debug	Print a debug message (only when option is set)
msg_header	Print a section header
msg_info	Print an informational message
msg_kv	Print a two-column key-value table
msg_list	Print a named list of items
msg_process	Print a process / action message
msg_progress	Simple inline progress counter
msg_rule	Print a simple rule / divider
msg_spinner	Animated spinner for long-running tasks
msg_success	Print a success message
msg_timed	Time a block and report duration
msg_todo	Print a todo item
msg_try	Run expr and catch + style any errors/warnings
msg_verbose	Message only when verbose option is TRUE
msg_warn	Print a warning message (styled, non-stopping)
msg_warning	Warn with a styled warning message
pluck	Extract an Element from a Nested Structure
pmap	Apply a Function to Multiple Lists in Parallel
pmap_chr	Apply a Function to Multiple Lists in Parallel
pmap_dbl	Apply a Function to Multiple Lists in Parallel
pmap_dfc	Apply a Function to Multiple Lists in Parallel
pmap_dfr	Apply a Function to Multiple Lists in Parallel
pmap_int	Apply a Function to Multiple Lists in Parallel
pmap_lgl	Apply a Function to Multiple Lists in Parallel
pwalk	Apply a Function for Side Effects
toConceptSet	Convert a single data.frame to a concept set expression list
toConceptSets	Convert Concept Set Expression Tibble(s) to Concept Set Expression Lists
walk	Apply a Function for Side Effects
walk2	Apply a Function for Side Effects