Antedependence Models for Longitudinal Data
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Documentation for package ‘antedep’ version 0.1.0
Help Pages
| aic_cat | Akaike information criterion for fitted categorical AD models |
| aic_gau | Akaike information criterion for fitted Gaussian AD models |
| aic_inad | Akaike information criterion for fitted INAD models |
| Bell | The Bell distribution |
| bic_cat | Bayesian information criterion for fitted categorical AD models |
| bic_gau | Bayesian information criterion for fitted Gaussian AD models |
| bic_inad | Bayesian information criterion for fitted INAD models |
| bic_order_cat | BIC-based order selection for categorical AD models |
| bic_order_gau | BIC-based order selection for Gaussian AD models |
| bic_order_inad | BIC-based order selection for INAD models |
| bolus_inad | Morphine bolus analgesia counts |
| cattle_growth | Cattle growth data (Treatments A and B) |
| ci_cat | Confidence intervals for fitted categorical AD models |
| ci_gau | Confidence intervals for fitted Gaussian AD models |
| ci_inad | Confidence intervals for fitted INAD models |
| cochlear_implant | Cochlear implant speech recognition data |
| dbell | The Bell distribution |
| em_cat | EM algorithm for categorical AD model estimation |
| em_gau | EM algorithm for Gaussian AD model estimation |
| em_inad | EM algorithm for INAD model estimation |
| fit_cat | Fit categorical antedependence model by maximum likelihood |
| fit_gau | Fit Gaussian antedependence model by maximum likelihood |
| fit_inad | Fit INAD antedependence model by maximum likelihood |
| labor_force_cat | Labor force longitudinal categorical data (Table 1) |
| logL_cat | Log-likelihood for categorical AD models (with missing data support) |
| logL_gau | Log-likelihood for Gaussian AD models (with missing data support) |
| logL_inad | Log-likelihood for INAD models (with missing data support) |
| logL_inad_i | INAD log likelihood contribution at time i (no fixed effect) |
| partial_corr | Compute intervenor-adjusted partial correlation matrix |
| pbell | The Bell distribution |
| plot_prism | PRISM plot (Partial Residual Intervenor Scatterplot Matrix) |
| plot_profile | Profile plot (spaghetti plot) for longitudinal data |
| print.cat_ci | Print method for cat_ci objects |
| print.cat_fit | Print method for cat_fit objects |
| print.cat_lrt | Print method for cat_lrt objects |
| print.gau_bic_order | Print method for BIC order selection |
| print.gau_ci | Print method for AD confidence intervals |
| print.gau_contrast_test | Print method for AD contrast test |
| print.gau_fit | Print method for gau_fit objects |
| print.gau_homogeneity_test | Print method for AD homogeneity test |
| print.gau_mean_test | Print method for AD mean test |
| print.gau_order_test | Print method for AD order test |
| print.homogeneity_tests_inad | Print method for homogeneity_tests_inad |
| print.inad_ci | Print method for INAD confidence intervals |
| print.inad_fit | Print method for INAD model fits |
| print.test_homogeneity_inad | Print method for test_homogeneity_inad |
| qbell | The Bell distribution |
| race_100km | 100km race split-time data |
| rbell | The Bell distribution |
| run_homogeneity_tests_inad | Run all homogeneity tests for INAD |
| run_order_tests_cat | Run all pairwise order tests |
| run_stationarity_tests_cat | Run all stationarity-related tests for categorical AD |
| run_stationarity_tests_gau | Run all stationarity-related tests for Gaussian AD |
| run_stationarity_tests_inad | Run all stationarity-related tests for INAD |
| simulate_cat | Simulate categorical antedependence series |
| simulate_gau | Simulate Gaussian antedependence series |
| simulate_inad | Simulate INAD antedependence series |
| summary.cat_ci | Summary method for cat_ci objects |
| summary.gau_ci | Summary method for gau_ci objects |
| summary.inad_ci | Summary method for inad_ci objects |
| test_contrast_gau | Test linear hypotheses on the mean under antedependence |
| test_homogeneity_cat | Likelihood ratio test for homogeneity across groups (categorical AD data) |
| test_homogeneity_gau | Likelihood ratio test for homogeneity across groups (Gaussian AD data) |
| test_homogeneity_inad | Likelihood ratio test for homogeneity across groups (INAD data) |
| test_one_sample_gau | One-sample test for mean structure under antedependence |
| test_order_cat | Likelihood ratio test for antedependence order (categorical AD data) |
| test_order_gau | Likelihood ratio test for antedependence order (Gaussian AD data) |
| test_order_inad | Likelihood ratio test for antedependence order (INAD data) |
| test_stationarity_cat | Likelihood ratio test for stationarity (categorical AD data) |
| test_stationarity_gau | Likelihood ratio test for stationarity (Gaussian AD data) |
| test_stationarity_inad | Likelihood ratio test for stationarity (INAD data) |
| test_timeinvariance_cat | Likelihood ratio test for time-invariance (categorical data) |
| test_two_sample_gau | Two-sample test for equality of mean profiles under antedependence |