35d81ef39659605bd13526a37bf22bdf *COPYRIGHT
f129960c6800354526efca3dc5349551 *DESCRIPTION
5a79456cf8b0950d47d5b744e661e708 *INDEX
e63f3d4a3f2abeab00ffb35e4dd08766 *Meta/Rd.rds
37d8b81a466ed6231df3028dcc22e6be *Meta/features.rds
74008650e21506e9c42fc59676088d66 *Meta/hsearch.rds
cb1d540d5190b0c2fc8cff413fc88a77 *Meta/links.rds
fa2d526d6243f7834ba37c7dd16a4212 *Meta/nsInfo.rds
74e701d0921dc351aefa9e3e50573e2c *Meta/package.rds
a6914e3cf84cde3c27b17c70dd60a170 *NAMESPACE
119f30f11d44a539118fe655b6f300c8 *NEWS.md
d6c68f1fe41ced6e98a766a3757313da *R/Rduckhts
2a5d2be98bb8ff6feb26197d1993a045 *R/Rduckhts.rdb
4510780294a969a30d537263956c3532 *R/Rduckhts.rdx
7543cfd69ab8a5ecba55e38037922954 *README.md
448ff943ea386284ceb34448393b724b *WORDLIST
4ab60a2ef6d3e9f83c48245804105141 *duckhts_extension/bam_reader.c
2646229609987b9015a3bb24d0a777fb *duckhts_extension/bcf_reader.c
784a6171a1de06f6f33d7e6d55e3d0ff *duckhts_extension/bcftools_filter.c
0f39ca9e9be49c4118b021f3ff2f2f1d *duckhts_extension/bcftools_shim.c
35faf27ce7d75c456293148cebbf1e4f *duckhts_extension/bgzip.c
672e013c3dbfa95c0601ba6a85ca8f39 *duckhts_extension/build/duckhts.duckdb_extension
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aa58568cfb2de7fef9f6b3d2eb3f89f9 *duckhts_extension/duckdb_capi/duckdb_extension.h
421df7e90620ba7c00ec0b905e13f1ca *duckhts_extension/duckhts.c
5bfe87a78f0f6db00927e4416db9a4a5 *duckhts_extension/hts_index_builder.c
f9b420c12575c99da4b1be095a87b901 *duckhts_extension/hts_meta_reader.c
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96e6aa0e9c280ec4dedbc9df57def2db *duckhts_extension/include/bcftools_shim.h
8ea41635f12b975aae720c43a4d446a8 *duckhts_extension/include/filter.h
9321f5f3edef590d169028e82ae16170 *duckhts_extension/include/quality_encoding.h
f7b2fa7224b7c83be60a41bbcd533329 *duckhts_extension/include/seq_encoding.h
78d87cf03e3c3614e40e6f6feab2387f *duckhts_extension/include/vcf_types.h
38ef80c843a343d1854cdc2b2af4942c *duckhts_extension/include/vep_parser.h
3df1d2bc21e9f885d4423cc0534a5b70 *duckhts_extension/interval_udf.c
c805192d16359a2881da6e6724d4fb2d *duckhts_extension/kmer_udf.c
2863a6bcf9f05e9f3dd8a675b296d417 *duckhts_extension/liftover_udf.c
584455a64d5adfa43ed76bff14a7de70 *duckhts_extension/munge_udf.c
3c02d2b85267118afbbf60f65377e787 *duckhts_extension/quality_encoding.c
71fa0c4e36f8ecff05f0319c2274fe65 *duckhts_extension/quality_encoding_reader.c
756a039e51c33c7f8b5225e502880e9b *duckhts_extension/score_udf.c
42edf50f2e3de0c47722be5c155d64fe *duckhts_extension/seq_reader.c
62fbffd0c14acce5b2d0ef5e037d5427 *duckhts_extension/tabix_reader.c
dd3d57768f422080d8e9822a1d164ddc *duckhts_extension/vep_parser.c
654af0f0bb08471361e8e665165fcb85 *extdata/aux_tags.sam.gz
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91888d15b994fb97a347be3c82e9b759 *extdata/parallel_empty_contigs.bam
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78898ca1eea44c297de5a3c01f32ff4c *extdata/score_as.vcf
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635b20ef4ba9f7e8793a26323b3728e2 *extdata/score_regions.txt
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02d23332c15b9c8386582646d9171b23 *extdata/score_summary_na.tsv
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7d214dc101a720083085887bc0a09c7e *extdata/score_summary_rsid.tsv
59da68d1a0c56d22974f49b80aa4e011 *extdata/score_summary_saige.tsv
529a2cc8f01bb62f0f9c76d7b83129ea *extdata/score_summary_smallp.tsv
3155909df0e451ade23fffdb5dd85970 *extdata/score_summary_ssf.tsv
635b20ef4ba9f7e8793a26323b3728e2 *extdata/score_targets.txt
922d22189a603ebb2311645d54c5f090 *extdata/spec_standard_corrections.vcf
66d32def38168136f0d5a0a524892baf *extdata/targets.bed
027212190bc3777423c0a20fa81b83c6 *extdata/test_vep.vcf
b61a5de8f859b6449471c1bcab1808ff *extdata/test_vep_snpeff.vcf
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dac6b73f431e51a58577cd7b251471bc *extdata/vcf_file.bcf
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adb33a28d20f915355e168210e4065ea *extdata/vcfpp_manifest.tsv
2f71bba87fec89bd6dcdb789d630dd90 *function_catalog/functions.md
8312abb6f5ba0be775884dd48383c171 *function_catalog/functions.tsv
b45cf913ccc32f69c0f2ab0765598504 *function_catalog/functions.yaml
2ea49b5a53571d244e7d6cff4d8a3bf9 *help/AnIndex
f71363c45e7fd4e694f093335b3f0e40 *help/Rduckhts.rdb
2cd157e67a68d047cabed4a5dac87ea3 *help/Rduckhts.rdx
3015a4b6b0f99ccc40a9627475802fc7 *help/aliases.rds
be8e5b26bd1ba4a8713f9e220561ce37 *help/paths.rds
e4c4abea21dd21f54ac2c862555afd88 *html/00Index.html
ee41876c0116916bb04bcf4fe3e43d78 *html/R.css
f1aae85b70eaaf1e2f3224a70da6d130 *patches/duckdb_capi_strict_prototypes.patch
9637bd62ab5c89800c97e80e16dc9fa8 *tinytest/test_bam_file_offset.R
2e7081709f8d8c22a6f9303f3dd2f838 *tinytest/test_basic.R
bddf98220a34843a2af06faad92b3cc6 *tinytest/test_bcf.R
24da8d7260821e88ca7a2baaa408f7c3 *tinytest/test_cigar_utils.R
84accf7479e6923b70a9ef7c83aa3465 *tinytest/test_indexes_bgzip.R
fa93c5e14ba63bd18bd96d996cb004c3 *tinytest/test_integration.R
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2a4f892c11b4b29ca3d53dfd2293c02f *tinytest/test_liftover.R
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9ea8663f699d47a451d369df96b0bb2f *tinytest/test_munge.R
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5d04a80edd6233b4c8669673197c0759 *tinytest/test_quality_encoding.R
8ebca5e1a42bae7401aee437b4dd85c1 *tinytest/test_score.R
37f352fc4e421994e12e95940b18b4be *tinytest/test_seq_ops.R
9fac14a50c095ed909ecfbdbe071473b *tinytest/test_type_mappings.R
