Estimate Potential Impact and Population Attributable Fractions with Aggregated Data


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Documentation for package ‘deltapif’ version 0.4.5

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alcohol Alcohol consumption in Australia from Pandeya et al
as.data.frame Transform an object into a data.frame
as.list Convert to list
as.matrix Convert a 'covariance_structure' to 'matrix'
as_covariance_structure Transform into a covariance structure
as_covstr Transform into a covariance structure
attributable_cases Attributable cases
averted_cases Attributable cases
cancer_rr Relative risks for cancer from Pandeya et al
casecalc Attributable cases
change_link Change the link
children Get the children labels from a 'pif_class'
coef Extract coefficients of a pif object
col_names Row and Column names
confint Extract confidence intervals
correlation Covariance matrix, correlation matrix, variance and standard deviation for potential impact fractions
covariance Covariance matrix, correlation matrix, variance and standard deviation for potential impact fractions
covariance_structure Default covariance structures
covariance_structure2 Default covariance structures
covariance_structures Default covariance structures
covariance_structure_class Covariance structure class
covcor Covariance matrix, correlation matrix, variance and standard deviation for potential impact fractions
default_parameter_covariance_structure Default covariance structures
default_parameter_covariance_structure2 Default covariance structures
default_pif_covariance_structure Default covariance structures
default_pif_covariance_structure2 Default covariance structures
default_weight_covariance_structure Default covariance structures
default_weight_covariance_structure2 Default covariance structures
default_weight_pif_covariance_structure Default covariance structures
default_weight_pif_covariance_structure2 Default covariance structures
dementiacov Relative risk covariance from Lee et al
dementiarisk Exposure and Relative Risk data from Lee et Al
derivatives Partial derivatives of PIF
deriv_pif_beta Partial derivatives of PIF
deriv_pif_p Partial derivatives of PIF
flatten_names Names of a PIF's components
fraction_type Get the type of the fraction
length Length of an object
names Get the label of a PIF or PAF
paf Potential Impact fraction and Population Attributable Fraction
paf_ensemble Combine Potential Impact Fractions and Population Attributable Fractions
paf_total Combine Potential Impact Fractions and Population Attributable Fractions
pif Potential Impact fraction and Population Attributable Fraction
pifpaf Potential Impact fraction and Population Attributable Fraction
pif_ensemble Combine Potential Impact Fractions and Population Attributable Fractions
pif_total Combine Potential Impact Fractions and Population Attributable Fractions
print Print or show a potential impact fraction
rowcol Row and Column names
row_names Row and Column names
standard_deviation Covariance matrix, correlation matrix, variance and standard deviation for potential impact fractions
subset Subset a 'covariance_structure'
summary Summary of an object
totalpifpaf Combine Potential Impact Fractions and Population Attributable Fractions
variance Covariance matrix, correlation matrix, variance and standard deviation for potential impact fractions
weighted_adjusted Weighted Adjusted Fractions
weighted_adjusted_paf Weighted Adjusted Fractions
weighted_adjusted_pif Weighted Adjusted Fractions
weights Extract weights of a pif_global_ensemble