Toolkit for the 'Entrez' API


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Documentation for package ‘jentre’ version 0.1.0

Help Pages

as_id_list Entrez identifier sets
check_id_list Check ID set is well formed
check_id_set Check ID set is well formed
check_web_history Check ID set is well formed
efetch Fetch records from Entrez
einfo Get details about Entrez databases
einfo_databases Get details about Entrez databases
elink ELink API for fetching links between databases
elink_map ELink API for fetching links between databases
entrez_api_key Construct a request to the Entrez API
entrez_count Count the number of entries in an ID set
entrez_database Check ID set is well formed
entrez_request Construct a request to the Entrez API
entrez_validate Look up accessions and other IDs on Entrez
epost Register UIDs with the Entrez history server
esearch Search Entrez databases
esummary Fetch document summaries from Entrez
id_list Entrez identifier sets
is_id_list Entrez identifier sets
is_id_set Entrez identifier sets
is_web_history Entrez identifier sets
process Process API results
topic-process Process API results
web_history Entrez identifier sets