UK Epidemiological Data Management


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Documentation for package ‘epidm’ version 1.0.6

Help Pages

cip_spells Continuous Inpatient (CIP) Spells
csv_from_zip Download a csv from a zip
genus_gram_stain Bacterial Genus Gram Stain Lookup Table
group_ecds_discharge_destination A&E attendance discharge destination
group_inpatient_admission_method Inpatient admission methods
group_inpatient_discharge_destination Inpatient discharge destination
group_time Grouping of intervals or events that occur close together in time
hospital_in_out_dates Hospital IN/OUT dates
inpatient_codes Inpatient Codes cleanup
lab_data Synthetic Lab Data for epidm
lookup_recode Lookup table switch handler
proxy_episode_dates Clean and Impute HES/SUS Episode Start and End Dates
respeciate_generic Respeciate unspecified samples
respeciate_organism Respeciated organisms
specimen_type_grouping Specimen type grouping
sql_clean Clean and Read a SQL query
sql_connect Connect to a SQL database
sql_read Read a table from a SQL database
sql_write Write a table to a SQL database
uk_patient_id Patient ID record grouping
valid_nhs NHS Number Validity Check