Advanced Framework for Sap Flow Data Post-Process

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Documentation for package ‘fluxfixer’ version 1.0.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

calc_dtmax	Calculate dTmax by various methods
calc_fd	Calculate sap flux density time series
calc_ref_stats	Define reference values of average and standard deviation
calc_sw_in_toa	Calculate global solar radiation time series at TOA
check_absolute_limits	Remove outliers by absolute limits
dtmax	dTmax time series estimated by multiple methods
dt_gf	Quality-controlled and gap-filled dT time series
dt_noisy	Raw dT time series with various artifacts
fill_gaps	Fill missing values with a random forest model
filter_highfreq_noise	Filter high frequency noise by Gaussian filter
modify_short_drift	Modify short-term drifts
remove_manually	Remove error values manually
remove_rf_outlier	Remove outliers detected by a random forest model
remove_zscore_outlier	Remove outliers by Z-score time series
retrieve_ts	Retrieve time series in its original units
run_fluxfixer	Run all quality control processes automatically