# Missing Person Identification Tools

## Documentation for package ‘mispitools’ version 1.4.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

mispitools-package | mispitools: Missing Person Identification Tools
Argentina | STR Allele Frequencies from Argentina
Asia | STR Allele Frequencies from Asian Populations
Austria | STR Allele Frequencies from Austria
BosniaHerz | STR Allele Frequencies from Bosnia and Herzegovina
China | STR Allele Frequencies from China
compute_conditioned_prop | Compute Conditioned Proportions for Pigmentation Traits
compute_reference_prop | Compute Reference Population Proportions for Pigmentation Traits
cpt_missing_person | Missing Person-Based Conditional Probability Table
cpt_population | Population-Based Conditional Probability Table
decision_threshold | Compute Optimal Decision Threshold
error_matrix_hair | Hair Color Error/Confusion Matrix
Europe | STR Allele Frequencies from Europe
get_allele_freqs | Get Allele Frequencies in pedtools Format
Japan | STR Allele Frequencies from Japan
kl_bidirectional | Bidirectional Kullback-Leibler Divergence for Genetic Markers
kl_multi | Multi-Population Kullback-Leibler Divergence Matrix
kl_pie | Kullback-Leibler Divergence for Probability Matrices
lr_age | Likelihood Ratio for Age Variable
lr_birthdate | Likelihood Ratio for Birth Date
lr_combine | Combine Likelihood Ratios from Multiple Sources
lr_compute_pigmentation | Compute Likelihood Ratios for Pigmentation Traits
lr_hair_color | Likelihood Ratio for Hair Color
lr_pigmentation | Simulate LR Distributions for Pigmentation Traits
lr_sensitivity | Sensitivity Analysis for Likelihood Ratios
lr_sex | Likelihood Ratio for Biological Sex
lr_to_dataframe | Convert Genetic LR Simulations to Data Frame
mispitools | mispitools: Missing Person Identification Tools
mispitools_app | Comprehensive Shiny App for Missing Person Identification
plot_cpt | Plot Conditional Probability Tables Comparison
plot_decision_curve | Plot Decision Curve (FPR vs FNR)
plot_lr_distribution | Plot Likelihood Ratio Distributions
sim_lr_genetic | Simulate Likelihood Ratios from Genetic Data
sim_lr_prelim | Simulate Likelihood Ratios from Preliminary Investigation Data
sim_mp_prelim | Simulate Preliminary Investigation Data for Missing Persons
sim_poi_genetic | Simulate Genetic Profiles for Persons of Interest
sim_poi_prelim | Simulate Preliminary Investigation Data for Persons of Interest
sim_posterior | Simulate Posterior Odds Combining Genetic and Non-Genetic Evidence
sim_reference_pop | Simulate Reference Population with Pigmentation Traits
threshold_rates | Compute Error Rates at a Specific Threshold
USA | STR Allele Frequencies from United States