994bcee72c8358dd94e2f2f3d5d5e163 *DESCRIPTION
d2d50d46304c971061a176a843de7803 *NAMESPACE
9e6060b155cd412946555a5c3bc5ea11 *NEWS.md
21c9c8a3c1acbc6b4df8cc6b9c39312f *R/bundle.R
a161e4aa1bff5a76770c5d7e6da11cde *R/data.R
bbe52b6faa51444192e2e40c36c86031 *R/distance.R
e0a5b66425c81e9ad9125ceef6aa5b0a *R/fetch.R
da17e144a65eee36eef0e5b32bb81302 *R/taxodist-package.R
6d49f1f4d4c4ab3d0a58fbd2cea79316 *R/tree.R
6cbcce95e61d22d1cc358d19c756000a *R/utils.R
8bfa75aa1ae58130506638683ac3037c *build/vignette.rds
42b3b84b93f659be450af155749fad61 *data/taxobase.rda
b43d83cfdf6aed252f2b0bf19a54d72d *inst/CITATION
e0e5f596ced9a46c5df47356568659bd *inst/WORDLIST
1edb7ab7a6d2f1cdf186874c25ae037c *inst/doc/introduction.R
331ee3df6e99a2ceb907f88c5e274034 *inst/doc/introduction.Rmd
2ddc38e7df0c34cdac1f681f8f154a2e *inst/doc/introduction.html
bbf33752ec2735e1cb39993f88b0a681 *inst/doc/methodological-notes.R
c827bc75fb37a0ca8164aa0e7d0b8df3 *inst/doc/methodological-notes.Rmd
88d0abd96ff8d4e8008b5353b2ede91f *inst/doc/methodological-notes.html
2b8537273d6a5424e5b127edf5e54821 *inst/doc/statistical-applications.R
1e824e1643263436d6347c8efd992406 *inst/doc/statistical-applications.Rmd
9182de69f030a269f20afefb58fcef1f *inst/doc/statistical-applications.html
57aeb8f29742fb6eb6819ae6a1add3c1 *inst/schema/taxodist-bundle-v1.schema.json
de9be6fb6b0dfa483feeca8afe078742 *man/cache_info.Rd
175da93f346f84dcc9ee8b84901ed612 *man/check_coverage.Rd
447b122a3e893f88701227b750e0bd2c *man/clear_cache.Rd
0025285c422b37e301424818f38494bb *man/closest_relative.Rd
15122e1ed7029d3f868778fbf1aab4e3 *man/compare_bundles.Rd
1fcdc04438811008abd0ad529a943a64 *man/compare_lineages.Rd
440de2e1ff83d16880b13514cd2b46b1 *man/cross_distances.Rd
9b1e1b57d8b846399a6fe5f8626340e7 *man/distance_matrix.Rd
0ca5deccd99e615dc8cce4146a9c03ad *man/figures/taxodist_dark.png
62c77cca46983892cad54e6c7e4a414b *man/figures/taxodist_sepia.png
52fb7055def551713f787a85cebe91db *man/filter_clade.Rd
cdfb4b852d4eee2b5412df34be08791d *man/focal_distances.Rd
58676b1371078d7468ec902c6b4b9edd *man/get_lineage.Rd
ee4533839d8da497c11a66fa80ca5859 *man/get_lineage_by_id.Rd
e0b860c635d723f7bba88991ef1d99e2 *man/get_taxonomicon_id.Rd
382532cb82ba9be4d2c341ddd035f4db *man/is_member.Rd
9075344437cb798cdc9a5ebfcb0f0d5f *man/lineage_depth.Rd
51f112b9577ea2d89faca373d9bdc427 *man/load_cache.Rd
aef37137bd6fcea26af225d7f2fedc16 *man/mrca.Rd
c57f2bb3674154e3bcc9e3b5fd60217d *man/plot.taxodist_cluster.Rd
c1a85d3d03a98952c2e2c4371bac3571 *man/plot.taxodist_ord.Rd
94640268d275596aa2801d77bafe1988 *man/print.taxodist_bundle.Rd
dae7d7e80f8dc8a88fa23a7232107e1c *man/print.taxodist_bundle_comparison.Rd
7e32d8e54c75bf415421e035a1ee45cf *man/print.taxodist_focal.Rd
50b23aa27fd2a346c8f6bc16083f5e4f *man/print.taxodist_path.Rd
af20e5e0402065e7438f762442930415 *man/print.taxodist_resolution.Rd
6acc77ede170ac55c64d1fc430cc7aff *man/print.taxodist_result.Rd
5d478776cbf0a801d6a5cac6dd5f17ba *man/read_taxodist_bundle.Rd
3e6146e3cabe66debc367aaecceb1b8c *man/save_cache.Rd
93e8698a893794c4f73a1f73a2e69e81 *man/shared_clades.Rd
314008d81d5fcdae7799e2613a5d4f8a *man/summary.taxodist_ord.Rd
e164daa6d74083c72564d02464390d2c *man/taxo_bundle.Rd
485a7ac056a7d36963955a4c7a4000cb *man/taxo_cluster.Rd
63b5f914f884519a1fef52dee5c7dc0a *man/taxo_distance.Rd
191a32463e3ab0cd9724f1f479bc224e *man/taxo_from_lineages.Rd
e6c8f156a0df01990fbc49a4e8ef60d2 *man/taxo_heatmap.Rd
2baf90efa30e3bad2daea71b2aa7538d *man/taxo_ordinate.Rd
d283667696709acbfed26a71492faf23 *man/taxo_path.Rd
31ea2c6cfff8b0ca325a61b44aa169f2 *man/taxo_resolve.Rd
fda09c367577146ece4b3a673cced2b7 *man/taxo_search.Rd
ab60ece1d4434b7da3a0c5d19ce2edd9 *man/taxo_tree.Rd
9c213459c8af991aecfc851e0c17195f *man/taxobase.Rd
433610dab666a786ce92280e0d82482d *man/taxodist-package.Rd
b22ee8029d57db40151524cfab0d5b59 *man/write_taxodist_bundle.Rd
f44ee78d78b0620e439fb937bf7ec845 *tests/testthat.R
c9f23eefbf9e2d364cb7de2c416b2f9d *tests/testthat/helper.R
267d6640cbd22a45f4954f721cfe946a *tests/testthat/test-analysis.R
a971cfdc9dfce071ab75e61af792ea01 *tests/testthat/test-bundle-compare.R
8e19c54ae97a7418a5185d1b4272f145 *tests/testthat/test-bundle.R
2c7117707fbdd1c9516d1d932d45be90 *tests/testthat/test-cache.R
f16cdd6159b8807d4289f8bf225fecba *tests/testthat/test-data.R
0eba9da629b92240e1aae117b84e5a44 *tests/testthat/test-distance.R
3f73f14f53edaeb3e59f724e4f06fa6e *tests/testthat/test-fetch.R
ee578d7e508de2f26c537a5bb9cdca06 *tests/testthat/test-matrix.R
3d40d256b64571263cbce3d1281bc903 *tests/testthat/test-network.R
9a38384ae26a636df9f96dc02fd5710a *tests/testthat/test-path.R
1cb11d364068c94d245ef1ce8de69b9b *tests/testthat/test-resolution.R
91411332d820f52e34d6103e92cda354 *tests/testthat/test-tree.R
331ee3df6e99a2ceb907f88c5e274034 *vignettes/introduction.Rmd
c827bc75fb37a0ca8164aa0e7d0b8df3 *vignettes/methodological-notes.Rmd
1e824e1643263436d6347c8efd992406 *vignettes/statistical-applications.Rmd
