Last updated on 2024-04-25 07:59:53 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.7 | 107.38 | 337.76 | 445.14 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 2.1.7 | 88.21 | 270.38 | 358.59 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 2.1.7 | 611.35 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 2.1.7 | 667.78 | NOTE | |||
| r-devel-windows-x86_64 | 2.1.7 | 94.00 | 299.00 | 393.00 | NOTE | |
| r-patched-linux-x86_64 | 2.1.7 | 110.06 | 319.73 | 429.79 | NOTE | |
| r-release-linux-x86_64 | 2.1.7 | 86.23 | 328.50 | 414.73 | NOTE | |
| r-release-macos-arm64 | 2.1.7 | 137.00 | NOTE | |||
| r-release-windows-x86_64 | 2.1.7 | 92.00 | 289.00 | 381.00 | NOTE | |
| r-oldrel-macos-arm64 | 2.1.7 | 159.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 2.1.7 | 283.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 2.1.7 | 120.00 | 354.00 | 474.00 | NOTE |
Version: 2.1.7
Check: C++ specification
Result: NOTE
Specified C++14: please drop specification unless essential
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 2.1.7
Check: Rd files
Result: NOTE
checkRd: (-1) simulate_admixture.Rd:36: Lost braces
36 | \code{location}{ location of the marker under selection (in Morgan) }
| ^
checkRd: (-1) simulate_ancestry.Rd:49: Lost braces
49 | \code{location}{ location of the marker under selection (in Morgan) }
| ^
checkRd: (-1) simulate_ancestry_migration.Rd:59: Lost braces
59 | \code{location}{ location of the marker under selection (in Morgan) }
| ^
checkRd: (-1) simulate_sequence.Rd:51: Lost braces
51 | \code{location}{ location of the marker under selection (in Morgan) }
| ^
checkRd: (-1) simulate_sequence_migration.Rd:58: Lost braces
58 | \code{location}{ location of the marker under selection (in Morgan) }
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-macos-arm64, r-release-windows-x86_64
Version: 2.1.7
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/158s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(GenomeAdmixR) # nolint
>
> test_check("GenomeAdmixR")
|
| | 0%
|
|=================================== | 50%
|
|======================================================================| 100%[ FAIL 1 | WARN 0 | SKIP 0 | PASS 454 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-simulate_admixture_data.R:202:3'): simulate_admixture_data_recombination_map ──
`all_j` not equal to `expected_num_j`.
1/1 mismatches
[1] 67 - 100 == -33
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 454 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 2.1.7
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘methods’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 2.1.7
Check: installed package size
Result: NOTE
installed size is 6.6Mb
sub-directories of 1Mb or more:
doc 2.0Mb
libs 4.0Mb
Flavors: r-release-macos-arm64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64