Last updated on 2024-11-08 07:50:12 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.16.2 | 38.31 | 208.26 | 246.57 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.16.2 | 31.82 | 159.33 | 191.15 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.16.2 | 440.55 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.16.2 | 417.86 | ERROR | |||
| r-devel-windows-x86_64 | 1.16.2 | 63.00 | 0.00 | 63.00 | FAIL | |
| r-patched-linux-x86_64 | 1.16.2 | 41.76 | 226.36 | 268.12 | OK | |
| r-release-linux-x86_64 | 1.16.2 | 40.37 | 224.75 | 265.12 | OK | |
| r-release-macos-arm64 | 1.16.2 | 142.00 | NOTE | |||
| r-release-macos-x86_64 | 1.16.2 | 279.00 | NOTE | |||
| r-release-windows-x86_64 | 1.16.2 | 59.00 | 611.00 | 670.00 | OK | |
| r-oldrel-macos-arm64 | 1.16.2 | 136.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 1.16.2 | 247.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.16.2 | 60.00 | 710.00 | 770.00 | OK |
Version: 1.16.2
Check: compiled code
Result: NOTE
File ‘data.table/libs/data_table.so’:
Found non-API calls to R: ‘LEVELS’, ‘SETLENGTH’, ‘SET_GROWABLE_BIT’,
‘SET_TRUELENGTH’, ‘STRING_PTR’, ‘TRUELENGTH’
Compiled code should not call non-API entry points in R.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.16.2
Check: tests
Result: ERROR
Running ‘S4.R’ [1s/1s]
Running ‘autoprint.R’ [0s/1s]
Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
Running ‘froll.R’ [26s/31s]
Running ‘knitr.R’ [1s/1s]
Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK
Running ‘main.R’ [58s/70s]
Running ‘nafill.R’ [1s/1s]
Running ‘other.R’ [0s/0s]
Running ‘programming.R’ [1s/2s]
Running ‘types.R’ [0s/1s]
Running the tests in ‘tests/main.R’ failed.
Complete output:
> require(data.table)
Loading required package: data.table
>
> test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
getDTthreads(verbose=TRUE):
This installation of data.table has not been compiled with OpenMP support.
omp_get_num_procs() 1
R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
R_DATATABLE_NUM_THREADS unset
R_DATATABLE_THROTTLE unset (default 1024)
omp_get_thread_limit() 1
omp_get_max_threads() 1
OMP_THREAD_LIMIT 3
OMP_NUM_THREADS 3
RestoreAfterFork true
data.table is using 1 threads with throttle==1024. See ?setDTthreads.
test.data.table() running: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/tests/tests.Rraw.bz2
Error in bmerge(i, x, leftcols, rightcols, roll, rollends, nomatch, mult, :
typeof x.START_DATE (integer) != typeof i.DATE (double)
Thu Nov 7 21:54:31 2024 endian==little, sizeof(long double)==16, longdouble.digits==64, sizeof(pointer)==8, TZ==unset, Sys.timezone()=='Europe/Vienna', Sys.getlocale()=='LC_CTYPE=C.UTF-8;LC_NUMERIC=C;LC_TIME=C.UTF-8;LC_COLLATE=C;LC_MONETARY=C.UTF-8;LC_MESSAGES=C.UTF-8;LC_PAPER=C.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=C.UTF-8;LC_IDENTIFICATION=C', l10n_info()=='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE; codeset=UTF-8', getDTthreads()=='This installation of data.table has not been compiled with OpenMP support.; omp_get_num_procs()==1; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; R_DATATABLE_THROTTLE==unset (default 1024); omp_get_thread_limit()==1; omp_get_max_threads()==1; OMP_THREAD_LIMIT==3; OMP_NUM_THREADS==3; RestoreAfterFork==true; data.table is using 1 threads with throttle==1024. See ?setDTthreads.', .libPaths()=='/home/hornik/tmp/scratch/RtmpNeTiFZ/RLIBS_1cbf71468a71b4','/home/hornik/tmp/R.check/r-devel-clang/Work/build/library', zlibVersion()==1.3.1 ZLIB_VERSION==1.3.1
Error in test.data.table() :
Failed in 00:01:09 elapsed (57.4s cpu) after test 1847.3 before the next test() call in /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/tests/tests.Rraw.bz2
Calls: test.data.table -> stopf -> raise_condition -> signal
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.16.2
Check: tests
Result: ERROR
Running ‘S4.R’ [0s/1s]
Running ‘autoprint.R’ [0s/1s]
Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
Running ‘froll.R’ [15s/19s]
Running ‘knitr.R’ [0s/1s]
Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK
Running ‘main.R’ [57s/60s]
Running ‘nafill.R’ [1s/1s]
Running ‘other.R’ [0s/0s]
Running ‘programming.R’ [1s/2s]
Running ‘types.R’ [0s/1s]
Running the tests in ‘tests/main.R’ failed.
Complete output:
> require(data.table)
Loading required package: data.table
>
> test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
getDTthreads(verbose=TRUE):
OpenMP version (_OPENMP) 201511
omp_get_num_procs() 64
R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
R_DATATABLE_NUM_THREADS unset
R_DATATABLE_THROTTLE unset (default 1024)
omp_get_thread_limit() 3
omp_get_max_threads() 3
OMP_THREAD_LIMIT 3
OMP_NUM_THREADS 3
RestoreAfterFork true
data.table is using 3 threads with throttle==1024. See ?setDTthreads.
test.data.table() running: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/data.table/tests/tests.Rraw.bz2
Error in bmerge(i, x, leftcols, rightcols, roll, rollends, nomatch, mult, :
typeof x.START_DATE (integer) != typeof i.DATE (double)
Thu Nov 7 14:58:14 2024 endian==little, sizeof(long double)==16, longdouble.digits==64, sizeof(pointer)==8, TZ==unset, Sys.timezone()=='Europe/Vienna', Sys.getlocale()=='LC_CTYPE=C.UTF-8;LC_NUMERIC=C;LC_TIME=C.UTF-8;LC_COLLATE=C;LC_MONETARY=C.UTF-8;LC_MESSAGES=C.UTF-8;LC_PAPER=C.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=C.UTF-8;LC_IDENTIFICATION=C', l10n_info()=='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE; codeset=UTF-8', getDTthreads()=='OpenMP version (_OPENMP)==201511; omp_get_num_procs()==64; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; R_DATATABLE_THROTTLE==unset (default 1024); omp_get_thread_limit()==3; omp_get_max_threads()==3; OMP_THREAD_LIMIT==3; OMP_NUM_THREADS==3; RestoreAfterFork==true; data.table is using 3 threads with throttle==1024. See ?setDTthreads.', .libPaths()=='/tmp/RtmpBk2jdI/RLIBS_359e468c8c99f','/home/hornik/tmp/R.check/r-devel-gcc/Work/build/library', zlibVersion()==1.3.1 ZLIB_VERSION==1.3.1
Error in test.data.table() :
Failed in 59.5s elapsed (55.7s cpu) after test 1847.3 before the next test() call in /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/data.table/tests/tests.Rraw.bz2
Calls: test.data.table -> stopf -> raise_condition -> signal
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.16.2
Check: tests
Result: ERROR
Running ‘S4.R’
Running ‘autoprint.R’
Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
Running ‘froll.R’ [49s/163s]
Running ‘knitr.R’
Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK
Running ‘main.R’ [105s/246s]
Running ‘nafill.R’
Running ‘other.R’
Running ‘programming.R’
Running ‘types.R’
Running the tests in ‘tests/main.R’ failed.
Complete output:
> require(data.table)
Loading required package: data.table
>
> test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
getDTthreads(verbose=TRUE):
OpenMP version (_OPENMP) 202011
omp_get_num_procs() 24
R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
R_DATATABLE_NUM_THREADS unset
R_DATATABLE_THROTTLE unset (default 1024)
omp_get_thread_limit() 2
omp_get_max_threads() 24
OMP_THREAD_LIMIT 2
OMP_NUM_THREADS unset
RestoreAfterFork true
data.table is using 2 threads with throttle==1024. See ?setDTthreads.
test.data.table() running: /data/gannet/ripley/R/packages/tests-clang/data.table.Rcheck/data.table/tests/tests.Rraw.bz2
Error in bmerge(i, x, leftcols, rightcols, roll, rollends, nomatch, mult, :
typeof x.START_DATE (integer) != typeof i.DATE (double)
Wed Nov 6 21:00:09 2024 endian==little, sizeof(long double)==16, longdouble.digits==64, sizeof(pointer)==8, TZ==unset, Sys.timezone()=='Europe/London', Sys.getlocale()=='LC_CTYPE=en_GB.utf8;LC_NUMERIC=C;LC_TIME=en_GB.UTF-8;LC_COLLATE=C;LC_MONETARY=en_GB.UTF-8;LC_MESSAGES=en_GB.UTF-8;LC_PAPER=en_GB.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_GB.UTF-8;LC_IDENTIFICATION=C', l10n_info()=='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE; codeset=UTF-8', getDTthreads()=='OpenMP version (_OPENMP)==202011; omp_get_num_procs()==24; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; R_DATATABLE_THROTTLE==unset (default 1024); omp_get_thread_limit()==2; omp_get_max_threads()==24; OMP_THREAD_LIMIT==2; OMP_NUM_THREADS==unset; RestoreAfterFork==true; data.table is using 2 threads with throttle==1024. See ?setDTthreads.', .libPaths()=='/tmp/Rtmp4OJft3/RLIBS_2d6aac3ee3ed86','/data/gannet/ripley/R/R-clang/library', zlibVersion()==1.2.11 ZLIB_VERSION==1.2.11
Error in test.data.table() :
Failed in 00:04:03 elapsed (00:01:41 cpu) after test 1847.3 before the next test() call in /data/gannet/ripley/R/packages/tests-clang/data.table.Rcheck/data.table/tests/tests.Rraw.bz2
Calls: test.data.table -> stopf -> raise_condition -> signal
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.16.2
Check: tests
Result: ERROR
Running ‘S4.R’
Running ‘autoprint.R’
Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
Running ‘froll.R’ [41s/41s]
Running ‘knitr.R’
Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK
Running ‘main.R’ [86s/85s]
Running ‘nafill.R’
Running ‘other.R’
Running ‘programming.R’
Running ‘types.R’
Running the tests in ‘tests/main.R’ failed.
Complete output:
> require(data.table)
Loading required package: data.table
>
> test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
getDTthreads(verbose=TRUE):
OpenMP version (_OPENMP) 201511
omp_get_num_procs() 24
R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
R_DATATABLE_NUM_THREADS unset
R_DATATABLE_THROTTLE unset (default 1024)
omp_get_thread_limit() 2
omp_get_max_threads() 24
OMP_THREAD_LIMIT 2
OMP_NUM_THREADS unset
RestoreAfterFork true
data.table is using 2 threads with throttle==1024. See ?setDTthreads.
test.data.table() running: /data/gannet/ripley/R/packages/tests-devel/data.table.Rcheck/data.table/tests/tests.Rraw.bz2
Error in bmerge(i, x, leftcols, rightcols, roll, rollends, nomatch, mult, :
typeof x.START_DATE (integer) != typeof i.DATE (double)
Mon Nov 4 15:13:42 2024 endian==little, sizeof(long double)==16, longdouble.digits==64, sizeof(pointer)==8, TZ==unset, Sys.timezone()=='Europe/London', Sys.getlocale()=='LC_CTYPE=en_GB.utf8;LC_NUMERIC=C;LC_TIME=en_GB.UTF-8;LC_COLLATE=C;LC_MONETARY=en_GB.UTF-8;LC_MESSAGES=en_GB.UTF-8;LC_PAPER=en_GB.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_GB.UTF-8;LC_IDENTIFICATION=C', l10n_info()=='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE; codeset=UTF-8', getDTthreads()=='OpenMP version (_OPENMP)==201511; omp_get_num_procs()==24; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; R_DATATABLE_THROTTLE==unset (default 1024); omp_get_thread_limit()==2; omp_get_max_threads()==24; OMP_THREAD_LIMIT==2; OMP_NUM_THREADS==unset; RestoreAfterFork==true; data.table is using 2 threads with throttle==1024. See ?setDTthreads.', .libPaths()=='/data/gannet/ripley/R/packages/tests-devel/data.table.Rcheck','/data/gannet/ripley/R/test-dev','/data/gannet/ripley/R/test-BioCdata','/data/gannet/ripley/R/R-devel/library', zlibVersion()==1.2.11 ZLIB_VERSION==1.2.11
Error in test.data.table() :
Failed in 00:01:24 elapsed (00:01:23 cpu) after test 1847.3 before the next test() call in /data/gannet/ripley/R/packages/tests-devel/data.table.Rcheck/data.table/tests/tests.Rraw.bz2
Calls: test.data.table -> stopf -> raise_condition -> signal
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.16.2
Check: compiled code
Result: NOTE
File 'data.table/libs/x64/data_table.dll':
Found non-API calls to R: 'LEVELS', 'SETLENGTH', 'SET_GROWABLE_BIT',
'SET_TRUELENGTH', 'STRING_PTR', 'TRUELENGTH'
Compiled code should not call non-API entry points in R.
See 'Writing portable packages' in the 'Writing R Extensions' manual,
and section 'Moving into C API compliance' for issues with the use of
non-API entry points.
Flavor: r-devel-windows-x86_64
Version: 1.16.2
Check: tests
Result: FAIL
Check process probably crashed or hung up for 20 minutes ... killed
Most likely this happened in the example checks (?),
if not, ignore the following last lines of example output:
>
> ### Name: update_dev_pkg
> ### Title: Perform update of development version of a package
> ### Aliases: update_dev_pkg
> ### Keywords: data
>
> ### ** Examples
>
> ## Don't show:
> # using if(FALSE) because \dontrun could still be run by --run-dontrun; #5421
> ## End(Don't show)
> if (FALSE) data.table::update_dev_pkg()
>
>
>
> ### * <FOOTER>
> ###
> cleanEx()
> options(digits = 7L)
> base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n")
Time elapsed: 6.24 0.25 7.5 NA NA
> grDevices::dev.off()
null device
1
> ###
> ### Local variables: ***
> ### mode: outline-minor ***
> ### outline-regexp: "\\(> \\)?### [*]+" ***
> ### End: ***
> quit('no')
======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-devel-windows-x86_64
Version: 1.16.2
Check: installed package size
Result: NOTE
installed size is 5.6Mb
sub-directories of 1Mb or more:
libs 1.8Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64