Last updated on 2026-02-02 07:50:41 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.94 | 253.68 | 267.62 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.71 | 255.79 | 265.50 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 26.00 | 298.75 | 324.75 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 28.00 | 350.39 | 378.39 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 198.00 | 219.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.55 | 283.39 | 297.94 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.60 | 288.17 | 302.77 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 582.00 | 592.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 189.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 634.00 | 645.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 252.00 | 277.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [109s/539s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.620, system: 0.049, elapsed: 4.769 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.559, system: 0.103, elapsed: 28.247 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.021, elapsed: 1.226 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.088, system: 0.781, elapsed: 55.159 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.011, elapsed: 0.291 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.251, system: 0.992, elapsed: 90.999 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.877, system: 0.109, elapsed: 2.597 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.789, system: 0.340, elapsed: 11.701 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.301, system: 0.034, elapsed: 0.292 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.614, system: 0.938, elapsed: 123.585 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.435 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.367, system: 1.468, elapsed: 139.464 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.625, system: 0.045, elapsed: 4.382 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.643, system: 0.088, elapsed: 26.416 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.326, system: 0.017, elapsed: 1.794 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.092, system: 0.951, elapsed: 179.605 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.007, elapsed: 0.436 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.269, system: 0.348, elapsed: 1.892 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.840, system: 1.495, elapsed: 216.574 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.561, system: 0.040, elapsed: 3.637 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.548, system: 0.051, elapsed: 18.207 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.014, elapsed: 1.035 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.477, system: 0.933, elapsed: 46.224 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.003, elapsed: 0.188 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 16.838, system: 1.239, elapsed: 13.181 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 37.595, system: 2.312, elapsed: 84.048 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [107s/586s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.737, system: 0.081, elapsed: 1.998 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.652, system: 0.232, elapsed: 24.177 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.227, system: 0.018, elapsed: 1.529 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.909, system: 0.927, elapsed: 180.707 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.438 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.306, system: 1.302, elapsed: 210.051 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.544, system: 0.032, elapsed: 4.538 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.612, system: 0.065, elapsed: 26.740 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.018, elapsed: 1.252 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.888, system: 0.945, elapsed: 181.755 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.506 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.999, system: 1.084, elapsed: 216.397 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.591, system: 0.034, elapsed: 5.273 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.434, system: 0.055, elapsed: 28.147 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.018, elapsed: 1.252 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.277, system: 0.819, elapsed: 76.660 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.007, elapsed: 0.231 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.214, system: 0.310, elapsed: 1.174 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.596, system: 1.269, elapsed: 114.533 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.672, system: 0.058, elapsed: 2.362 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.377, system: 0.148, elapsed: 12.776 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.418, system: 0.021, elapsed: 0.216 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.865, system: 0.820, elapsed: 5.786 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.166 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 14.717, system: 0.997, elapsed: 16.232 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 37.078, system: 2.091, elapsed: 38.371 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64