BayesianTools: General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics
General-purpose MCMC and SMC samplers, as well as plot and diagnostic functions for Bayesian statistics, with a particular focus on calibrating complex system models. Implemented samplers include various Metropolis MCMC variants (including adaptive and/or delayed rejection MH), the T-walk, two differential evolution MCMCs, two DREAM MCMCs, and a sequential Monte Carlo (SMC) particle filter.
| Version: | 0.1.8 |
| Depends: | R (≥ 3.1.2) |
| Imports: | coda, emulator, mvtnorm, tmvtnorm, IDPmisc, Rcpp (≥ 0.12.12), ellipse, numDeriv, msm, MASS, Matrix, stats, utils, graphics, DHARMa, gap, bridgesampling |
| LinkingTo: | Rcpp |
| Suggests: | DEoptim, lhs, sensitivity, knitr, rmarkdown, roxygen2, testthat |
| Published: | 2023-01-30 |
| DOI: | 10.32614/CRAN.package.BayesianTools |
| Author: | Florian Hartig 
[aut, cre],
Francesco Minunno [aut],
Stefan Paul [aut],
David Cameron [ctb],
Tankred Ott [ctb],
Maximilian Pichler [ctb] |
| Maintainer: | Florian Hartig <florian.hartig at biologie.uni-regensburg.de> |
| BugReports: | https://github.com/florianhartig/BayesianTools/issues |
| License: | GPL-3 |
| URL: | https://github.com/florianhartig/BayesianTools |
| NeedsCompilation: | yes |
| Materials: | NEWS |
| In views: | Bayesian |
| CRAN checks: | BayesianTools results |
Documentation:
| Reference manual: | BayesianTools.pdf |
| Vignettes: |
Manual for the BayesianTools R package (source, R code) Interfacing your model with R (source, R code) |
Downloads:
| Package source: | BayesianTools_0.1.8.tar.gz |
| Windows binaries: | r-devel: BayesianTools_0.1.8.zip, r-release: BayesianTools_0.1.8.zip, r-oldrel: BayesianTools_0.1.8.zip |
| macOS binaries: | r-devel (arm64): BayesianTools_0.1.8.tgz, r-release (arm64): BayesianTools_0.1.8.tgz, r-oldrel (arm64): BayesianTools_0.1.8.tgz, r-devel (x86_64): BayesianTools_0.1.8.tgz, r-release (x86_64): BayesianTools_0.1.8.tgz, r-oldrel (x86_64): BayesianTools_0.1.8.tgz |
| Old sources: | BayesianTools archive |
Reverse dependencies:
| Reverse imports: | DPTM, eDITH, rsofun |
| Reverse suggests: | apsimx, ProfoundData, pttstability, r3PG |
| Reverse enhances: | DHARMa |
Linking:
Please use the canonical form https://CRAN.R-project.org/package=BayesianTools to link to this page.