Performs cluster analysis using an ensemble clustering framework, Chiu & Talhouk (2018) <doi:10.1186/s12859-017-1996-y>. Results from a diverse set of algorithms are pooled together using methods such as majority voting, K-Modes, LinkCluE, and CSPA. There are options to compare cluster assignments across algorithms using internal and external indices, visualizations such as heatmaps, and significance testing for the existence of clusters.
| Version: | 3.0.0 |
| Depends: | R (≥ 4.1) |
| Imports: | abind, assertthat, class, clue, clusterCrit, clv, clValid, dplyr (≥ 0.7.5), ggplot2, grDevices, infotheo, klaR, magrittr, mclust, methods, pheatmap, purrr (≥ 0.2.3), RankAggreg, Rcpp, stringr, tidyr, yardstick |
| LinkingTo: | Rcpp |
| Suggests: | apcluster, blockcluster, cluster, covr, dbscan, e1071, kernlab, knitr, kohonen, NMF, pander, poLCA, progress, RColorBrewer, rlang, rmarkdown, Rtsne, sigclust, testthat (≥ 3.0.0) |
| Published: | 2025-02-05 |
| DOI: | 10.32614/CRAN.package.diceR |
| Author: | Derek Chiu [aut, cre], Aline Talhouk [aut], Johnson Liu [ctb, com] |
| Maintainer: | Derek Chiu <dchiu at bccrc.ca> |
| BugReports: | https://github.com/AlineTalhouk/diceR/issues |
| License: | MIT + file LICENSE |
| URL: | https://github.com/AlineTalhouk/diceR/, https://alinetalhouk.github.io/diceR/ |
| NeedsCompilation: | yes |
| Materials: | README NEWS |
| CRAN checks: | diceR results |
| Reference manual: | diceR.pdf |
| Vignettes: |
Cluster Analysis using 'diceR' (source, R code) |
| Package source: | diceR_3.0.0.tar.gz |
| Windows binaries: | r-devel: diceR_3.0.0.zip, r-release: diceR_3.0.0.zip, r-oldrel: diceR_3.0.0.zip |
| macOS binaries: | r-devel (arm64): diceR_3.0.0.tgz, r-release (arm64): diceR_3.0.0.tgz, r-oldrel (arm64): diceR_3.0.0.tgz, r-devel (x86_64): diceR_3.0.0.tgz, r-release (x86_64): diceR_3.0.0.tgz, r-oldrel (x86_64): diceR_3.0.0.tgz |
| Old sources: | diceR archive |
| Reverse depends: | omada |
| Reverse imports: | clusterMI |
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