ecocomDP: Tools to Create, Use, and Convert ecocomDP Data

Work with the Ecological Community Data Design Pattern. 'ecocomDP' is a flexible data model for harmonizing ecological community surveys, in a research question agnostic format, from source data published across repositories, and with methods that keep the derived data up-to-date as the underlying sources change. Described in O'Brien et al. (2021), <doi:10.1016/j.ecoinf.2021.101374>.

Version: 1.3.1
Depends: R (≥ 3.4.0)
Imports: RColorBrewer, data.table, dplyr, EML (≥ 2.0.5), emld (≥ 0.5.1), geosphere, ggplot2, httr, lubridate, magrittr, methods, neonUtilities (≥ 2.1.1), rlang, rmarkdown, stats, stringr, tidyr, tools, utils, uuid, xml2, neonOS
Suggests: knitr, mime, reader, ritis, taxize, testthat, worrms, ggrepel, usmap (≥ 0.6.1), sf (≥ 1.0.9), maps
Published: 2024-02-21
Author: Colin Smith ORCID iD [aut, cre, cph], Eric Sokol ORCID iD [aut], Margaret O'Brien ORCID iD [aut], Matt Bitters [ctb], Melissa Chen [ctb], Savannah Gonzales [ctb], Matt Helmus [ctb], Brendan Hobart [ctb], Ruvi Jaimes [ctb], Lara Janson [ctb], Marta Jarzyna [ctb], Michael Just [ctb], Daijiang Li [ctb], Wynne Moss [ctb], Kari Norman [ctb], Stephanie Parker [ctb], Rafael Rangel ORCID iD [ctb], Natalie Robinson [ctb], Thilina Surasinghe [ctb], Kyle Zollo-Venecek ORCID iD [ctb]
Maintainer: Colin Smith <colin.smith at wisc.edu>
BugReports: https://github.com/EDIorg/ecocomDP/issues
License: MIT + file LICENSE
URL: https://github.com/EDIorg/ecocomDP
NeedsCompilation: no
Language: en-US
Materials: README NEWS
CRAN checks: ecocomDP results

Documentation:

Reference manual: ecocomDP.pdf
Vignettes: Convert ecocomDP Data to Another Model Format
Create ecocomDP Data
ecocomDP Model Overview
Shared Practices for Creating ecocomDP Data
Use ecocomDP Data

Downloads:

Package source: ecocomDP_1.3.1.tar.gz
Windows binaries: r-devel: ecocomDP_1.2.2.zip, r-release: ecocomDP_1.3.1.zip, r-oldrel: ecocomDP_1.3.1.zip
macOS binaries: r-release (arm64): ecocomDP_1.3.1.tgz, r-oldrel (arm64): ecocomDP_1.3.1.tgz, r-release (x86_64): ecocomDP_1.3.1.tgz
Old sources: ecocomDP archive

Linking:

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