multipleDL: Addressing Detection Limits by Cumulative Probability Models (CPMs)

Build CPMs (cumulative probability models, also known as cumulative link models) to account for detection limits (both single and multiple detection limits) in response variables. Conditional quantiles and conditional CDFs can be calculated based on fitted models. The package implements methods described in Tian, Y., Li, C., Tu, S., James, N. T., Harrell, F. E., & Shepherd, B. E. (2022). "Addressing Detection Limits with Semiparametric Cumulative Probability Models". <doi:10.48550/arXiv.2207.02815>.

Version: 1.0.0
Depends: R (≥ 3.4.0)
Imports: methods, stats, Rcpp (≥ 0.12.0), RcppParallel (≥ 5.0.1), rstan (≥ 2.18.1), rstantools (≥ 2.1.1), SparseM
LinkingTo: BH (≥ 1.66.0), Rcpp (≥ 0.12.0), RcppEigen (≥ 0.3.3.3.0), RcppParallel (≥ 5.0.1), rstan (≥ 2.18.1), StanHeaders (≥ 2.18.0)
Published: 2023-11-24
Author: Yuqi Tian [aut, cre], Chun Li [aut], Shengxin Tu [aut], Nathan James [aut], Frank Harrell [aut], Bryan Shepherd [aut]
Maintainer: Yuqi Tian <yuqitian35 at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
SystemRequirements: GNU make
Materials: README
CRAN checks: multipleDL results

Documentation:

Reference manual: multipleDL.pdf

Downloads:

Package source: multipleDL_1.0.0.tar.gz
Windows binaries: r-devel: multipleDL_1.0.0.zip, r-release: multipleDL_1.0.0.zip, r-oldrel: multipleDL_1.0.0.zip
macOS binaries: r-release (arm64): multipleDL_1.0.0.tgz, r-oldrel (arm64): multipleDL_1.0.0.tgz, r-release (x86_64): multipleDL_1.0.0.tgz

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