veesa 0.1.8
- Fixed the proportion of variability reported by
plot_pc_directions and plot_pc_diffs:
latent from fdasrvf already holds the eigenvalues of the
covariance matrix, so the values are no longer squared before being
scaled
- Fixed
compute_logloss (and therefore
compute_pfi with metric = "logloss") returning
NA when the response levels are not numbers, and added an
error for responses with more than two classes
- Fixed
prep_testing_data centering the hfPCA and vfPCA
coefficients with statistics computed from the test data instead of the
training data, which made a test function’s coefficients depend on the
rest of the test batch
prep_testing_data now aligns the test data with the
same elasticity and penalty that were used on the training data, and
accepts lambda and penalty_method to override
them. Both are validated, "norm" is accepted as an alias
for "l2gam" (fdasrvf::optimum.reparam only
takes the current penalty names), and the settings used are returned in
a new call component
prep_training_data now validates lambda
and penalty_method before passing them to
fdasrvf::time_warping, and the documentation of
lambda describes its role as the weight on the alignment
penalty
- Fixed
center_warping_funs leaving the SRSF mean
uncentered
- Exported
align_pcdirs and
center_warping_funs, which were documented but
unavailable
- Replaced the deprecated
size aesthetic and tidyselect
usage in the plotting functions, which removes the deprecation warnings
raised on every call
- Corrected the documentation of
alpha and
linetype in the plotting functions, which described them as
vectors when they are single values
- Added tests for the plotting functions, the metric helpers,
align_pcdirs, and center_warping_funs
veesa 0.1.7
- Added a function for plotting the differences between the PC
directions and the mean
veesa 0.1.6
- Resubmission to CRAN with more fixes
- Made it to CRAN
veesa 0.1.5
- Resubmission to CRAN with fixes
veesa 0.1.4
- Initial CRAN submission!
- Documentation clean up
veesa 0.1.3
- Updated inputs in prep_training_data to match fdasrvf
- Added examples to documentation
- Cleaned up wording in documentation a bit
- Added tests
veesa 0.1.2
- Added shifted peaks data
- Added example code from manuscript
veesa 0.1.1
- Adjusted title in plot_pc_directions
- Updated code to new version of fdasrvf
veesa 0.1.0
- Initial version of package