adjustedCurves: Confounder-Adjusted Survival Curves and Cumulative Incidence Functions

Estimate and plot confounder-adjusted survival curves using either 'Direct Adjustment', 'Direct Adjustment with Pseudo-Values', various forms of 'Inverse Probability of Treatment Weighting', two forms of 'Augmented Inverse Probability of Treatment Weighting', 'Empirical Likelihood Estimation' or 'Targeted Maximum Likelihood Estimation'. Also includes a significance test for the difference between two adjusted survival curves and the calculation of adjusted restricted mean survival times. Additionally enables the user to estimate and plot cause-specific confounder-adjusted cumulative incidence functions in the competing risks setting using the same methods (with some exceptions). For details, see Denz et. al (2023) <doi:10.1002/sim.9681>.

Version: 0.11.0
Imports: R.utils, doParallel, doRNG, dplyr (≥ 1.0.0), foreach, rlang
Suggests: MASS, Matching (≥ 4.9), WeightIt (≥ 0.11.0), cmprsk (≥ 2.2), eventglm (≥ 1.1.1), geepack (≥ 1.3), ggplot2 (≥ 3.4.0), knitr, mice (≥ 3.0.0), nnet, pammtools (≥ 0.5), pec (≥ 2020.11.17), prodlim (≥ 2019.11.13), riskRegression (≥ 2020.12.08), rmarkdown, survival (≥ 3.0.0), testthat (≥ 3.0.0), tidyr, ggpp (≥ 0.4.3), vdiffr (≥ 1.0.0), covr, data.table, concrete (≥ 1.0.5), numDeriv
Published: 2024-02-13
Author: Robin Denz [aut, cre]
Maintainer: Robin Denz <robin.denz at rub.de>
Contact: <robin.denz@rub.de>
BugReports: https://github.com/RobinDenz1/adjustedCurves/issues
License: GPL (≥ 3)
URL: https://github.com/RobinDenz1/adjustedCurves, https://robindenz1.github.io/adjustedCurves/
NeedsCompilation: no
Citation: adjustedCurves citation info
Materials: README NEWS
CRAN checks: adjustedCurves results

Documentation:

Reference manual: adjustedCurves.pdf
Vignettes: An Introduction to the 'adjustedCurves' Package
Overview of methods in adjustedCurves

Downloads:

Package source: adjustedCurves_0.11.0.tar.gz
Windows binaries: r-devel: adjustedCurves_0.11.0.zip, r-release: adjustedCurves_0.11.0.zip, r-oldrel: adjustedCurves_0.11.0.zip
macOS binaries: r-release (arm64): adjustedCurves_0.11.0.tgz, r-oldrel (arm64): adjustedCurves_0.11.0.tgz, r-release (x86_64): adjustedCurves_0.11.0.tgz
Old sources: adjustedCurves archive

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