avotrex: A Global Dataset of Anthropogenic Extinct Birds and their Traits: Phylogeny Builder
Grafts the extinct bird species from the 'Avotrex' database (Sayol et al., in review) on to the 'BirdTree' phylogenies <https://birdtree.org>, using a set of different commands.
| Version: | 1.3.0 |
| Depends: | R (≥ 4.0.0) |
| Imports: | ape, doParallel, doSNOW, dplyr, foreach, parallel, phytools, snow, stringr, tidytree (≥ 0.4.6), TreeTools, utils |
| Suggests: | testthat, markdown, knitr, rmarkdown, covr |
| Published: | 2024-07-30 |
| DOI: | 10.32614/CRAN.package.avotrex |
| Author: | Joseph Wayman 
[aut, cre],
Thomas J. Matthews
[aut],
Paul Dufour [ctb],
Ferran Sayol [ctb],
Pedro Cardoso [ctb] |
| Maintainer: | Joseph Wayman <j.wayman at bham.ac.uk> |
| License: | GPL-3 |
| NeedsCompilation: | no |
| Citation: | avotrex citation info |
| Materials: | README NEWS |
| CRAN checks: | avotrex results |
Documentation:
| Reference manual: | avotrex.pdf |
| Vignettes: |
avotrex R Package (source, R code) |
Downloads:
| Package source: | avotrex_1.3.0.tar.gz |
| Windows binaries: | r-devel: avotrex_1.3.0.zip, r-release: avotrex_1.3.0.zip, r-oldrel: avotrex_1.3.0.zip |
| macOS binaries: | r-devel (arm64): avotrex_1.3.0.tgz, r-release (arm64): avotrex_1.3.0.tgz, r-oldrel (arm64): avotrex_1.3.0.tgz, r-devel (x86_64): avotrex_1.3.0.tgz, r-release (x86_64): avotrex_1.3.0.tgz, r-oldrel (x86_64): avotrex_1.3.0.tgz |
| Old sources: | avotrex archive |
Linking:
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