For Multi Parent Populations (MPP) Identity By Descend (IBD)
probabilities are computed using Hidden Markov Models. These probabilities
are then used in a mixed model approach for QTL Mapping as described in
Li et al. (<doi:10.1007/s00122-021-03919-7>).
Version: |
1.0.2 |
Depends: |
R (≥ 3.6), statgenGWAS (≥ 1.0.8) |
Imports: |
data.table, foreach, ggplot2, gridExtra, LMMsolver, Matrix, scales, spam, statgenIBD (≥ 1.0.4), stringi |
Suggests: |
rmarkdown, knitr, tinytest |
Published: |
2022-12-02 |
DOI: |
10.32614/CRAN.package.statgenMPP |
Author: |
Wenhao Li [aut],
Martin Boer [aut],
Bart-Jan van Rossum
[aut, cre],
Fred van Eeuwijk
[ctb] |
Maintainer: |
Bart-Jan van Rossum <bart-jan.vanrossum at wur.nl> |
License: |
GPL (≥ 3) |
NeedsCompilation: |
no |
Citation: |
statgenMPP citation info |
Materials: |
README NEWS |
In views: |
Agriculture |
CRAN checks: |
statgenMPP results |