Available CRAN Packages By Name


A3Accurate, Adaptable, and Accessible Error Metrics for Predictive Models
AalenJohansenConditional Aalen-Johansen Estimation
AATtoolsReliability and Scoring Routines for the Approach-Avoidance Task
ABACUSApps Based Activities for Communicating and Understanding Statistics
abasequenceCoding 'ABA' Patterns for Sequence Data
abbreviateReadable String Abbreviation
abcTools for Approximate Bayesian Computation (ABC)
abc.dataData Only: Tools for Approximate Bayesian Computation (ABC)
ABC.RAPArray Based CpG Region Analysis Pipeline
ABCanalysisComputed ABC Analysis
abclassAngle-Based Large-Margin Classifiers
ABCoptimImplementation of Artificial Bee Colony (ABC) Optimization
ABCp2Approximate Bayesian Computational Model for Estimating P2
abcrfApproximate Bayesian Computation via Random Forests
abcrldaAsymptotically Bias-Corrected Regularized Linear Discriminant Analysis
abctoolsTools for ABC Analyses
abdThe Analysis of Biological Data
abdivAlpha and Beta Diversity Measures
abeAugmented Backward Elimination
aberranceDetect Aberrant Behavior in Test Data
abessFast Best Subset Selection
abglassoAdaptive Bayesian Graphical Lasso
ABHgenotypeREasy Visualization of ABH Genotypes
abindCombine Multidimensional Arrays
abjDataDatabases Used Routinely by the Brazilian Jurimetrics Association
abjutilsUseful Tools for Jurimetrical Analysis Used by the Brazilian Jurimetrics Association
ablassoArellano-Bond LASSO Estimator for Dynamic Linear Panel Models
ABMAgent Based Model Simulation Framework
abmRAgent-Based Models in R
abnModelling Multivariate Data with Additive Bayesian Networks
abnormalityMeasure a Subject's Abnormality with Respect to a Reference Population
abodOutlierAngle-Based Outlier Detection
ABPSThe Abnormal Blood Profile Score to Detect Blood Doping
abseil'C++' Header Files from 'Abseil'
absorberVariable Selection in Nonparametric Models using B-Splines
abstrR Interface to the A/B Street Transport System Simulation Software
abstractrAn R-Shiny Application for Creating Visual Abstracts
ABSurvTDCSurvival Analysis using Time Dependent Covariate for Animal Breeding
abtestBayesian A/B Testing
abundantHigh-Dimensional Principal Fitted Components and Abundant Regression
Ac3netInferring Directional Conservative Causal Core Gene Networks
ACAAbrupt Change-Point or Aberration Detection in Point Series
AcademicThemesColour Plots with Palettes from Academic Institutions
academictwitteRAccess the Twitter Academic Research Product Track V2 API Endpoint
accExploring Accelerometer Data
accaA Canonical Correlation Analysis with Inferential Guaranties
accelerometryFunctions for Processing Accelerometer Data
accelmissingMissing Value Imputation for Accelerometer Data
AccelStabAccelerated Stability Kinetic Modelling
acceptThe Acute COPD Exacerbation Prediction Tool (ACCEPT)
AcceptanceSamplingCreation and Evaluation of Acceptance Sampling Plans
AcceptRejectAcceptance-Rejection Method for Generating Pseudo-Random Observations
accessibilityTransport Accessibility Measures
accessrCommand Line Tools to Produce Accessible Documents using 'R Markdown'
accessrmdImproving the Accessibility of 'rmarkdown' Documents
accrualBayesian Accrual Prediction
accrualPlotAccrual Plots and Predictions for Clinical Trials
accSDAAccelerated Sparse Discriminant Analysis
accucorNatural Abundance Correction of Mass Spectrometer Data
accumulateSplit-Apply-Combine with Dynamic Groups
acdcqueryQuery the Attentional Control Data Collection
acdcRAgro-Climatic Data by County
ACDmTools for Autoregressive Conditional Duration Models
ACE.CoCoAnalysis of Correlated High-Dimensional Expression (ACE) Data
ace2fastqACE File to FASTQ Converter
acebayesOptimal Bayesian Experimental Design using the ACE Algorithm
aceEditorThe 'Ace' Editor as a HTML Widget
ACEPAnalisis Computacional de Eventos de Protesta
acepackACE and AVAS for Selecting Multiple Regression Transformations
ACEsearch'ACE' Search Engine API
ACEsimFitACE Kin Pair Data Simulations and Model Fitting
ACEtEstimating Dynamic Heritability and Twin Model Comparison
acfMPeriodRobust Estimation of the ACF from the M-Periodogram
AchillesAchilles Data Source Characterization
acidAnalysing Conditional Income Distributions
acled.apiAutomated Retrieval of ACLED Conflict Event Data
ACNEAffymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization
acnrAnnotated Copy-Number Regions
acopulaModelling Dependence with Multivariate Archimax (or any User-Defined Continuous) Copulas
AcousticNDLCodeRCoding Sound Files for Use with NDL
acpAutoregressive Conditional Poisson
acroA Tool for Automating the Statistical Disclosure Control of Research Outputs
acronameEngine for Acronyms and Initialisms
AcrossTicA Cost-Minimal Regular Spanning Subgraph with TreeClust
acsDownload, Manipulate, and Present American Community Survey and Decennial Data from the US Census
acssAlgorithmic Complexity for Short Strings
acss.dataData Only: Algorithmic Complexity of Short Strings (Computed via Coding Theorem Method)
ACSSpackACSS, Corresponding ACSS, and GLP Algorithm
ACSWRA Companion Package for the Book "A Course in Statistics with R"
actAligned Corpus Toolkit
ACTCDAsymptotic Classification Theory for Cognitive Diagnosis
ActCRExtract Circadian Rhythms Metrics from Actigraphy Data
actelAcoustic Telemetry Data Analysis
ActFragActivity Fragmentation Metrics Extracted from Minute Level Activity Data
actilifecountsGenerate Activity Counts from Raw Accelerometer Data
ActiSleepSleep Duration Estimate Algorithm
activAnalyzerA 'Shiny' App to Analyze Accelerometer-Measured Daily Physical Behavior Data
activatrUtilities for Parsing and Plotting Activities
ActiveDriverFinding Cancer Driver Proteins with Enriched Mutations in Post-Translational Modification Sites
activegpGaussian Process Based Design and Analysis for the Active Subspace Method
ActivePathwaysIntegrative Pathway Enrichment Analysis of Multivariate Omics Data
activityAnimal Activity Statistics
ActivityIndexActivity Index Calculation using Raw 'Accelerometry' Data
activPALAdvanced Processing and Chart Generation from activPAL Events Files
actLiferCreating Actuarial Life Tables
actogrammrRead in Activity Data and Plot Actograms
actuarActuarial Functions and Heavy Tailed Distributions
actuaREHandling Hierarchically Structured Risk Factors using Random Effects Models
ActuarialMComputation of Actuarial Measures Using Bell G Family
actuaryrDevelop Actuarial Models
actxpsCreate Actuarial Experience Studies: Prepare Data, Summarize Results, and Create Reports
AcuityViewA Package for Displaying Visual Scenes as They May Appear to an Animal with Lower Acuity
acumos'Acumos' R Interface
ACVOptimal Out-of-Sample Forecast Evaluation and Testing under Stationarity
ACWRAcute Chronic Workload Ratio Calculation
adaThe R Package Ada for Stochastic Boosting
adabagApplies Multiclass AdaBoost.M1, SAMME and Bagging
adaceEstimator of the Adherer Average Causal Effect
adagioDiscrete and Global Optimization Routines
adaHuberAdaptive Huber Estimation and Regression
adamethodsArchetypoid Algorithms and Anomaly Detection
adanaAdaptive Nature-Inspired Algorithms for Hybrid Genetic Optimization
AdapSampAdaptive Sampling Algorithms
adapt4pvAdaptive Approaches for Signal Detection in Pharmacovigilance
adaptalintCheck Code Style Painlessly
adaptDiagBayesian Adaptive Designs for Diagnostic Trials
AdaptGaussGaussian Mixture Models (GMM)
adaptiveGPCAAdaptive Generalized PCA
adaptivetauTau-Leaping Stochastic Simulation
adaptIVPTAdaptive Bioequivalence Design for In-Vitro Permeation Tests
adaptMCMCImplementation of a Generic Adaptive Monte Carlo Markov Chain Sampler
adaptMTAdaptive P-Value Thresholding for Multiple Hypothesis Testing with Side Information
adaptrAdaptive Trial Simulator
ADAPTSAutomated Deconvolution Augmentation of Profiles for Tissue Specific Cells
adaptsmoFMRIAdaptive Smoothing of FMRI Data
adaptTestAdaptive Two-Stage Tests
adaRA Fast 'WHATWG' Compliant URL Parser
AdaSamplingAdaptive Sampling for Positive Unlabeled and Label Noise Learning
adassAdaptive Smoothing Spline (AdaSS) Estimator for the Function-on-Function Linear Regression
adbcdrivermanager'Arrow' Database Connectivity ('ADBC') Driver Manager
adbcpostgresql'Arrow' Database Connectivity ('ADBC') 'PostgreSQL' Driver
adbcsqlite'Arrow' Database Connectivity ('ADBC') 'SQLite' Driver
adbi'DBI' Compliant Database Access Using 'ADBC'
adcCalculate Antecedent Discharge Conditions
ADCTAdaptive Design in Clinical Trials
add2ggplotAdd to 'ggplot2'
addhazBinomial and Multinomial Additive Hazard Models
addhazardFit Additive Hazards Models for Survival Analysis
addinsJoaoMeloAddins Made of Joao Melo
addinslistDiscover and Install Useful RStudio Addins
addinsOutline'RStudio' Addins for Show Outline of a R Markdown/'LaTeX' Project
additiveBindings for Additive TidyModels
additiveDEAAdditive Data Envelopment Analysis Models
additivityTestsAdditivity Tests in the Two Way Anova with Single Sub-Class Numbers
addregAdditive Regression for Discrete Data
addScalesAdds Labeled Center Line and Scale Lines/Regions to Trellis Plots
ADDTAnalysis of Accelerated Destructive Degradation Test Data
ade4Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
ade4TkGUI'ade4' Tcl/Tk Graphical User Interface
adeaAlternate DEA Package
adegenetExploratory Analysis of Genetic and Genomic Data
adegraphicsAn S4 Lattice-Based Package for the Representation of Multivariate Data
adehabitatHRHome Range Estimation
adehabitatHSAnalysis of Habitat Selection by Animals
adehabitatLTAnalysis of Animal Movements
adehabitatMATools to Deal with Raster Maps
adelieA Fast and Flexible Group Elastic Net Solver
adephyloExploratory Analyses for the Phylogenetic Comparative Method
adeproA 'shiny' Application for the (Audio-)Visualization of Adverse Event Profiles
adeptAdaptive Empirical Pattern Transformation
adeptdataAccelerometry Data Sets
AdequacyModelAdequacy of Probabilistic Models and General Purpose Optimization
ADERData Analysis in Ecology
adespatialMultivariate Multiscale Spatial Analysis
adestrEstimation in Optimal Adaptive Two-Stage Designs
adfExplorerImport from and Export to Amiga Disk Files
adformRGet Adform Ads Data via the 'Windsor.ai' API
ADGofTestAnderson-Darling GoF test
adheRenceRXAssess Medication Adherence from Pharmaceutical Claims Data
AdhereRAdherence to Medications
AdhereRVizAdherence to Medications
adimproAdaptive Smoothing of Digital Images
adivAnalysis of Diversity
adjclustAdjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix
adjROCComputing Sensitivity at a Fix Value of Specificity and Vice Versa as Well as Bootstrap Metrics for ROC Curves
adjSURVCIParameter and Adjusted Probability Estimation for Right-Censored Data
adjustedcranlogsRemove Automated and Repeated Downloads from 'RStudio' 'CRAN' Download Logs
adjustedCurvesConfounder-Adjusted Survival Curves and Cumulative Incidence Functions
adklakedataAdirondack Long-Term Lake Data
adliftAn Adaptive Lifting Scheme Algorithm
ADLPAccident and Development Period Adjusted Linear Pools for Actuarial Stochastic Reserving
admiralADaM in R Asset Library
admiral.testTest Data for the 'admiral' Package
admiraldevUtility Functions and Development Tools for the Admiral Package Family
admiraloncoOncology Extension Package for ADaM in 'R' Asset Library
admiralophthaADaM in R Asset Library - Ophthalmology
admiralvaccineVaccine Extension Package for ADaM in 'R' Asset Library
admiscAdrian Dusa's Miscellaneous
AdMitAdaptive Mixture of Student-t Distributions
admixPackage Admix for Admixture (aka Contamination) Models
admixrAn Interface for Running 'ADMIXTOOLS' Analyses
ADMMAlgorithms using Alternating Direction Method of Multipliers
admmDensestSubmatrixAlternating Direction Method of Multipliers to Solve Dense Dubmatrix Problem
ADMMsigmaPenalized Precision Matrix Estimation via ADMM
admtoolsEstimate and Manipulate Age-Depth Models
ADMURAncient Demographic Modelling Using Radiocarbon
adnutsNo-U-Turn MCMC Sampling for 'ADMB' Models
adobeanalyticsrR Client for 'Adobe Analytics' API 2.0
adoptrAdaptive Optimal Two-Stage Designs
ADPAdoption Probability, Triers and Users Rate of a New Product
ADPclustFast Clustering Using Adaptive Density Peak Detection
ADPFUse Least Squares Polynomial Regression and Statistical Testing to Improve Savitzky-Golay
adproclusAdditive Profile Clustering Algorithms
adpssDesign and Analysis of Locally or Globally Efficient Adaptive Designs
adsSpatial Point Patterns Analysis
adsDataHubRGoogle Ads Data Hub API Client
ADTSATime Series Analysis
AdvancedBasketballStatsAdvanced Basketball Statistics
AdvBinomAppsUpper Clopper-Pearson Confidence Limits for Burn-in Studies under Additional Available Information
AdvDif4Solving 1D Advection Bi-Flux Diffusion Equation
adventrInteractive R Tutorials to Accompany Field (2016), "An Adventure in Statistics"
ADVICEAutomatic Direct Variable Selection via Interrupted Coefficient Estimation
adwAngular Distance Weighting Interpolation
adwaveWavelet Analysis of Genomic Data from Admixed Populations
adwordsRAccess the 'Google Adwords' API
aeddoAutomated and Early Detection of Disease Outbreaks
AEDForecastingChange Point Analysis in ARIMA Forecasting
aedseoAutomated and Early Detection of Seasonal Epidemic Onset
AEenrichAdverse Event Enrichment Tests
aelabCalculation of Greenhouse Gas Flux
AEPStatistical Modelling for Asymmetric Exponential Power Distribution
AERApplied Econometrics with R
AeRobiologyA Computational Tool for Aerobiological Data
AeroSampleREstimate Aerosol Particle Collection Through Sample Lines
AFModel-Based Estimation of Confounder-Adjusted Attributable Fractions
afcGeneralized Discrimination Score
afcoloursGovernment Analysis Function Recommended Accessible Colour Palette
afdxDiagnosis Performance Using Attributable Fraction
afexAnalysis of Factorial Experiments
AFFECTAccelerated Functional Failure Time Model with Error-Contaminated Survival Times
affinityRaster Georeferencing, Grid Affine Transforms, Cell Abstraction
affinitymatrixEstimation of Affinity Matrix
affluenceIndexAffluence (Richness) Indices
AFheritabilityThe Attributable Fraction (AF) Described as a Function of Disease Heritability, Prevalence and Intervention Specific Factors
AFMAtomic Force Microscope Image Analysis
afmToolkitFunctions for Atomic Force Microscope Force-Distance Curves Analysis
afptTools for Modelling of Animal Flight Performance
AFRToolkit for Regression Analysis of Kazakhstan Banking Sector Data
africamonitorAfrica Macroeconomic Monitor Database API
aftgeeAccelerated Failure Time Model with Generalized Estimating Equations
afthdAccelerated Failure Time for High Dimensional Data with MCMC
aftR2R-Squared Measure under Accelerated Failure Time (AFT) Models
afttestModel Diagnostics for Accelerated Failure Time Models
ag5ToolsToolbox for Downloading and Extracting Copernicus AgERA5 Data
agcountsCalculate 'ActiGraph' Counts from Accelerometer Data
AGDAnalysis of Growth Data
agegAge Grouping Functions
agena.aiR Wrapper for 'agena.ai' API
ageutilsCollection of Functions for Working with Age Intervals
agfhAgnostic Fay-Herriot Model for Small Area Statistics
agghooAggregated Hold-Out Cross Validation
AggregateRAggregate Numeric, Date and Categorical Variables
aggregationp-Value Aggregation Methods
aggTreesAggregation Trees
aggutilsUtilities for Aggregating Probabilistic Forecasts
AGHmatrixRelationship Matrices for Diploid and Autopolyploid Species
aghqAdaptive Gauss Hermite Quadrature for Bayesian Inference
aglmAccurate Generalized Linear Model
agopAggregation Operators and Preordered Sets
AGPRISAGricultural PRoductivity in Space
agReeVarious Methods for Measuring Agreement
AgreementIntervalAgreement Interval of Two Measurement Methods
agricolaeStatistical Procedures for Agricultural Research
agricolaeplotrVisualization of Design of Experiments from the 'agricolae' Package
agridatAgricultural Datasets
agrifeatureAgriculture Image Feature
agriTutorialTutorial Analysis of Some Agricultural Experiments
agriutilitiesUtilities for Data Analysis in Agriculture
agriwaterEvapotranspiration and Energy Fluxes Spatial Analysis
agrmtCalculate Concentration and Dispersion in Ordered Rating Scales
AgroRExperimental Statistics and Graphics for Agricultural Sciences
AgroRegRegression Analysis Linear and Nonlinear for Agriculture
agrostabStability Analysis for Agricultural Research
AgroTechData Analysis of Pesticide Application Technology
agsCrosswalk Municipality and District Statistics in Germany
agtboostAdaptive and Automatic Gradient Boosting Computations
agua'tidymodels' Integration with 'h2o'
agvgdAn R Implementation of the 'Align-GVGD' Method
ahazRegularization for Semiparametric Additive Hazards Regression
AHMAdditive Heredity Model: Method for the Mixture-of-Mixtures Experiments
AHMbookFunctions and Data for the Book 'Applied Hierarchical Modeling in Ecology' Vols 1 and 2
ahMLEMethods for the Additive Hazard Model
ahnrAn Implementation of the Artificial Hydrocarbon Networks
AhoCorasickTrieFast Searching for Multiple Keywords in Multiple Texts
AHPGaussianNew Multicriteria Method: AHPGaussian
AHPhybridAHP Hybrid Method
ahpsurveyAnalytic Hierarchy Process for Survey Data
AHPtoolsConsistency in the Analytic Hierarchy Process
ahptopsis2nHybrid Method for Multiple Criteria Decision-Making (MCDM)
AHPWRCompute Analytic Hierarchy Process
AHSurvFlexible Parametric Accelerated Hazards Models
ahwCalculates Continuous Time Likelihood Ratio Weights Assuming Multiplicative Intensity Models and Additive Hazard Models
aIcTesting for Compositional Pathologies in Datasets
AICcmodavgModel Selection and Multimodel Inference Based on (Q)AIC(c)
AICcPermanovaModel Selection of PERMANOVA Models Using AICc
AIDBox-Cox Power Transformation
aidarTools for Reading AIDA Files
aidesAdditive Information & Details of Evidence Synthesis
aifeducationArtificial Intelligence for Education
aihumanExperimental Evaluation of Algorithm-Assisted Human Decision-Making
aimPlotCreate Pie Like Plot for Completeness
aimsir17Irish Weather Observing Stations Hourly Records for 2017
aionArchaeological Time Series
AIPWAugmented Inverse Probability Weighting
airAI Assistant to Write and Understand R Code
aire.zmvmDownload Mexico City Pollution, Wind, and Temperature Data
airGRSuite of GR Hydrological Models for Precipitation-Runoff Modelling
airGRdatasetsHydro-Meteorological Catchments Datasets for the 'airGR' Packages
airGRdatassimEnsemble-Based Data Assimilation with GR Hydrological Models
airGRiwrm'airGR' Integrated Water Resource Management
airGRteachingTeaching Hydrological Modelling with the GR Rainfall-Runoff Models ('Shiny' Interface Included)
aiRlyR Wrapper for 'Airly' API
AirMonitorAir Quality Data Analysis
airnowRetrieve 'AirNow' Air Quality Observations and Forecasts
airportrConvenience Tools for Working with Airport Data
airportsData on Airports
airqualityESAir Quality Measurements in Spain from 2011 to 2018
airrAIRR Data Representation Reference Library
airtEvaluation of Algorithm Collections Using Item Response Theory
aiRthermoAtmospheric Thermodynamics and Visualization
aisophAdditive Isotonic Proportional Hazards Model
AIUQAb Initio Uncertainty Quantification
ajvAnother JSON Schema Validator
akcAutomatic Knowledge Classification
AkeAssociated Kernel Estimations
akiFlaggerFlags Acute Kidney Injury (AKI)
akimaInterpolation of Irregularly and Regularly Spaced Data
akmbiclustAlternating K-Means Biclustering
alabamaConstrained Nonlinear Optimization
alakazamImmunoglobulin Clonal Lineage and Diversity Analysis
alarmdataDownload, Merge, and Process Redistricting Data
ALassoSurvICAdaptive Lasso for the Cox Regression with Interval Censored and Possibly Left Truncated Data
albatrossPARAFAC Analysis of Fluorescence Excitation-Emission Matrices
aLBIEstimating Length-Based Indicators for Fish Stock
albopictusAge-Structured Population Dynamics Model
alcyonSpatial Network Analysis
aldThe Asymmetric Laplace Distribution
ALDqrQuantile Regression Using Asymmetric Laplace Distribution
aldvmmAdjusted Limited Dependent Variable Mixture Models
aleInterpretable Machine Learning and Statistical Inference with Accumulated Local Effects (ALE)
ALEPlotAccumulated Local Effects (ALE) Plots and Partial Dependence (PD) Plots
ALFAM2Dynamic Model of Ammonia Emission from Field-Applied Manure
aLFQEstimating Absolute Protein Quantities from Label-Free LC-MS/MS Proteomics Data
alfrConnectivity to 'Alfresco' Content Management Repositories
alfredDownloading Time Series from ALFRED Database for Various Vintages
algaeClassifyTools to Standardize Phytoplankton Taxonomic Data and Perform Functional Group Classifications
AlgDesignAlgorithmic Experimental Design
AlgebraicHaploPackageHaplotype Two Snips Out of a Paired Group of Patients
algoImplement an Address Search Auto Completion Menu on 'Shiny' Text Inputs Using the 'Algolia Places' 'Javascript' Library
algorithmiaAllows you to Easily Interact with the Algorithmia Platform
aliases2entrezConverts Human gene symbols to entrez IDs
alienEstimate Invasive and Alien Species (IAS) Introduction Rates
alignA Modified DTW Algorithm for Stratigraphic Time Series Alignment
alkahestPre-Processing XY Data from Experimental Methods
allcontributorsAcknowledge all Contributors to a Project
alleHapAllele Imputation and Haplotype Reconstruction from Pedigree Databases
allelematchIdentifying Unique Multilocus Genotypes where Genotyping Error and Missing Data may be Present
AlleleRetainAllele Retention, Inbreeding, and Demography
AlleleShiftPredict and Visualize Population-Level Changes in Allele Frequencies in Response to Climate Change
AllelicSeriesAllelic Series Test
allestimatesEffect Estimates from All Models
AllMetricsCalculating Multiple Performance Metrics of a Prediction Model
allMTAcute Lymphoblastic Leukemia Maintenance Therapy Analysis
allofusInterface for 'All of Us' Researcher Workbench
allomrRemoving Allometric Effects of Body Size in Morphological Analysis
AllspiceRNA-Seq Profile Classifier
alluvialAlluvial Diagrams
almanacTools for Working with Recurrence Rules
aloneDatasets from the Survival TV Series Alone
alookrModel Classifier for Binary Classification
aloomAll Leave-One-Out Models
alpacaFit GLM's with High-Dimensional k-Way Fixed Effects
alpha.correction.bhBenjamini-Hochberg Alpha Correction
alphabetrAlgorithms for High-Throughput Sequencing of Antigen-Specific T Cells
alphaciConfidence Intervals for Coefficient Alpha and Standardized Alpha
alphahullGeneralization of the Convex Hull of a Sample of Points in the Plane
alphaNSet Alpha Based on Sample Size Using Bayes Factors
alphaOutlierObtain Alpha-Outlier Regions for Well-Known Probability Distributions
AlphaPartPartition/Decomposition of Breeding Values by Paths of Information
alphashape3dImplementation of the 3D Alpha-Shape for the Reconstruction of 3D Sets from a Point Cloud
AlphaSimRBreeding Program Simulations
alphastableInference for Stable Distribution
alphavantagerLightweight Interface to the Alpha Vantage API
alqrfeAdaptive Lasso Quantile Regression with Fixed Effects
alr4Data to Accompany Applied Linear Regression 4th Edition
ALSMultivariate Curve Resolution Alternating Least Squares (MCR-ALS)
ALSCPCAccelerated line search algorithm for simultaneous orthogonal transformation of several positive definite symmetric matrices to nearly diagonal form
altadataAPI Wrapper for Altadata.io
altairInterface to 'Altair'
altdocPackage Documentation Websites with 'Quarto', 'Docsify', 'Docute', or 'MkDocs'
AlteredPQRDetection of Altered Protein Quantitative Relationships
altfuelrProvides an Interface to the NREL Alternate Fuels Locator
altmetaAlternative Meta-Analysis Methods
ALToptOptimal Experimental Designs for Accelerated Life Testing
altR2Alternative Estimators to Adjusted R-Squared
ALUESAgricultural Land Use Evaluation System
amanidaMeta-Analysis for Non-Integral Data
amanpgAlternating Manifold Proximal Gradient Method for Sparse PCA
amapAnother Multidimensional Analysis Package
amapGeocodeAn Interface to the 'AutoNavi Maps' API Geocoding Services
amaproThin Wrapper for Mapping Library 'AMap'
AMAPVoxLiDAR Data Voxelisation
amazonadsRGet Amazon Ads Data via the 'Windsor.ai' API
amazons3RGet Amazon S3 Data via the 'Windsor.ai' API
amazonspRGet Amazon Sp Data via the 'Windsor.ai' API
amberr'Amber' Electronic Data Capture Client
ambientA Generator of Multidimensional Noise
ambitSimulation and Estimation of Ambit Processes
AMCPA Model Comparison Perspective
AMCTestmakeRGenerate LaTeX Code for Auto-Multiple-Choice (AMC)
AmeliaA Program for Missing Data
amelieAnomaly Detection with Normal Probability Functions
amenAdditive and Multiplicative Effects Models for Networks and Relational Data
amerifluxrInterface to 'AmeriFlux' Data Services
amerikaAmerican Politics-Inspired Color Palette Generator
AmesHousingThe Ames Iowa Housing Data
amiChecks for Various Computing Environments
AmigaFFHCommodore Amiga File Format Handler
AMIMCompute the Adjusted Market Inefficiency Measure
ammiBayesBayesian Ammi Model for Continuous Data
ammistabilityAdditive Main Effects and Multiplicative Interaction Model Stability Parameters
AMModelsAdaptive Management Model Manager
AmmoniaConcentrationUn-Ionized Ammonia Concentration
aMNLFAAutomated Moderated Nonlinear Factor Analysis Using 'M-plus'
AmoudSurvTractable Parametric Odds-Based Regression Models
ampStatistical Test for the Multivariate Point Null Hypotheses
ampdAn Algorithm for Automatic Peak Detection in Noisy Periodic and Quasi-Periodic Signals
AmpGramPrediction of Antimicrobial Peptides
ampirPredict Antimicrobial Peptides
AMPLEShiny Apps to Support Capacity Building on Harvest Control Rules
AmpliconDuoStatistical Analysis of Amplicon Data of the Same Sample to Identify Artefacts
AMRAntimicrobial Resistance Data Analysis
amregtestRuns Allelematch Regression Tests
amscorerClinical Scores Calculator for Healthcare
amtAnimal Movement Tools
AmyloGramPrediction of Amyloid Proteins
anabelAnalysis of Binding Events + l
AnaCoDaAnalysis of Codon Data under Stationarity using a Bayesian Framework
AnacondaTargeted Differential and Global Enrichment Analysis of Taxonomic Rank by Shared Asvs
anacorSimple and Canonical Correspondence Analysis
analogseaInterface to 'DigitalOcean'
analogueAnalogue and Weighted Averaging Methods for Palaeoecology
AnalysisLinExploratory Data Analysis
analyzerData Analysis and Automated R Notebook Generation
AnanseSeuratConstruct ANANSE GRN-Analysis Seurat
AncestryMapperAssigning Ancestry Based on Population References
AnchorRegressionPerform AnchorRegression
andConstruct Natural-Language Lists with Internationalization
andrewsVarious Andrews Curves
AndromedaAsynchronous Disk-Based Representation of Massive Data
andurinhaMake Spectroscopic Data Processing Easier
anesrakeANES Raking Implementation
AnglerCreelSurveySimulationSimulate a Bus Route Creel Survey of Anglers
angstromATEImports Log Files from Angstrom Engineering Thermal Evaporator
angstromsTools for 'ROMS' the Regional Ocean Modeling System
aniDomInferring Dominance Hierarchies and Estimating Uncertainty
anim.plotsSimple Animated Plots for R
animalEKFExtended Kalman Filters for Animal Movement
AnimalHabitatNetworkNetworks Characterising the Physical Configurations of Animal Habitats
animateA Web-Based Graphics Device for Animated Visualisations
animationA Gallery of Animations in Statistics and Utilities to Create Animations
animbookVisualizing Changes in Performance Measures and Demographic Affiliations using Animation
animint2Animated Interactive Grammar of Graphics
animlA Collection of ML Tools for Conservation Research
anipathsAnimation of Multiple Trajectories with Uncertainty
aniSNAStatistical Network Analysis of Animal Social Networks
aniviewAnimate Shiny and R Markdown Content when it Comes into View
anMCCompute High Dimensional Orthant Probabilities
ANN2Artificial Neural Networks for Anomaly Detection
anndata'anndata' for R
annmatrixAnnotated Matrix: Matrices with Persistent Row and Column Annotations
AnnoProbeAnnotate the Gene Symbols for Probes in Expression Array
annotaterAnnotate Package Load Calls
AnnotationBustRExtract Subsequences from GenBank Annotations
annotatorImage Annotation and Polygon Outlining using Free Drawing
AnnuityRIRAnnuity Random Interest Rates
anocvaA Non-Parametric Statistical Test to Compare Clustering Structures
ANOFAAnalyses of Frequency Data
ANOMAnalysis of Means
anomalizeTidy Anomaly Detection
anomalyDetecting Anomalies in Data
ANOPAAnalyses of Proportions using Anscombe Transform
ANOVAIREVAInteractive Document for Working with Analysis of Variance
ANOVAShinyInteractive Document for Working with Analysis of Variance
ANOVAShiny2Interactive Document for Working with Analysis of Variance
anovirAnalysis of Virulence
anscombiserCreate Datasets with Identical Summary Statistics
ANSM5Functions and Data for the Book "Applied Nonparametric Statistical Methods", 5th Edition
AntAngioCOOLAnti-Angiogenic Peptide Prediction
anthroComputation of the WHO Child Growth Standards
anthroplusComputation of the WHO 2007 References for School-Age Children and Adolescents (5 to 19 Years)
AnthropMMDAn R Package for the Mean Measure of Divergence (MMD)
AnthropometryStatistical Methods for Anthropometric Data
AntibodyTitersAntibody Titer Analysis of Vaccinated Patients
anticlustSubset Partitioning via Anticlustering
antitrustTools for Antitrust Practitioners
antiwordExtract Text from Microsoft Word Documents
AntMANAnthology of Mixture Analysis Tools
AnxietySleepSleep Quality and Anxiety in Confinement
anybadgerCreate Custom Pipeline Badges
anyflightsQuery 'nycflights13'-Like Air Travel Data for Given Years and Airports
anyLibInstall and Load Any Package from CRAN, Bioconductor or Github
anytimeAnything to 'POSIXct' or 'Date' Converter
aoAlternating Optimization
aodAnalysis of Overdispersed Data
aods3Analysis of Overdispersed Data using S3 Methods
aoosAnother Object Orientation System
aopdataData from the 'Access to Opportunities Project (AOP)'
AoptbdtvcA-Optimal Block Designs for Comparing Test Treatments with Controls
aoristicGenerates Aoristic Probability Distributions
aorsfAccelerated Oblique Random Forests
aosAnimate on Scroll Library for 'shiny'
AOV1RInference in the Balanced One-Way ANOVA Model with Random Factor
AovBayClassic, Nonparametric and Bayesian One-Way Analysis of Variance Panel
apaFormat Outputs of Statistical Tests According to APA Guidelines
apache.sedonaR Interface for Apache Sedona
ApacheLogProcessorProcess the Apache Web Server Log Files
APackOfTheClonesVisualization of Clonal Expansion for Single Cell Immune Profiles
apaTablesCreate American Psychological Association (APA) Style Tables
apaTextCreate R Markdown Text for Results in the Style of the American Psychological Association (APA)
apcAge-Period-Cohort Analysis
APCalignResolving Plant Taxon Names Using the Australian Plant Census
APCanalysisAnalysis of Unreplicated Orthogonal Experiments using All Possible Comparisons
apcfAdapted Pair Correlation Function
APCIA New Age-Period-Cohort Model for Describing and Investigating Inter-Cohort Differences and Life Course Dynamics
apclusterAffinity Propagation Clustering
aPCoACovariate Adjusted PCoA Plot
APCtoolsRoutines for Descriptive and Model-Based APC Analysis
apdesignAn Implementation of the Additive Polynomial Design Matrix
apeAnalyses of Phylogenetics and Evolution
aPEARAdvanced Pathway Enrichment Analysis Representation
apercuQuick Look at your Data
apexPhylogenetic Methods for Multiple Gene Data
apexcharterCreate Interactive Chart with the JavaScript 'ApexCharts' Library
APFrMultiple Testing Approach using Average Power Function (APF) and Bayes FDR Robust Estimation
aphidAnalysis with Profile Hidden Markov Models
aphyloStatistical Inference and Prediction of Annotations in Phylogenetic Trees
api2lmFunctions and Data Sets for the Book "A Progressive Introduction to Linear Models"
APISAuto-Adaptive Parentage Inference Software Tolerant to Missing Parents
apisensrInterface to 'episensr' for Sensitivity Analysis of Epidemiological Results
aplore3Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic Regression" (3rd Ed., 2013)
aplotDecorate a 'ggplot' with Associated Information
aplotExtraCreating Composite Plots using 'aplot'
aplpackAnother Plot Package: 'Bagplots', 'Iconplots', 'Summaryplots', Slider Functions and Others
apmxAutomated Population Pharmacokinetic Dataset Assembly
apngConvert Png Files into Animated Png
ApoderoidesPrioritize and Delete Erroneous Taxa in a Large Phylogenetic Tree
apolloTools for Choice Model Estimation and Application
Apollonius2D Apollonius Graphs
appeearsInterface to 'AppEEARS' NASA Web Services
APPEstimationAdjusted Prediction Model Performance Estimation
appleadsRGet Apple Search Ads Data via the 'Windsor.ai' API
appler'Apple App Store' and 'iTunes' Data Extraction
applicableA Compilation of Applicability Domain Methods
AppliedPredictiveModelingFunctions and Data Sets for 'Applied Predictive Modeling'
appnnAmyloid Propensity Prediction Neural Network
apportionApportion Seats
appRioriCode and Obtain Customized Planned Comparisons with 'appRiori'
approximatorBayesian Prediction of Complex Computer Codes
approxmatchApproximately Optimal Fine Balance Matching with Multiple Groups
approxOTApproximate and Exact Optimal Transport Methods
appsflyeRGet Data from 'Appsflyer' via the 'Windsor.ai' API
appsheetAn Interface to the 'AppSheet' API
aprean3Datasets from Draper and Smith "Applied Regression Analysis" (3rd Ed., 1998)
aprofAmdahl's Profiler, Directed Optimization Made Easy
apsimxInspect, Read, Edit and Run 'APSIM' "Next Generation" and 'APSIM' Classic
APtoolsAverage Positive Predictive Values (AP) for Binary Outcomes and Censored Event Times
apyramidVisualize Population Pyramids Aggregated by Age
AQEvalAir Quality Evaluation
aqfigDisplay Air Quality Model Output and Monitoring Data
AQLSchemesRetrieving Acceptance Sampling Schemes
aqpAlgorithms for Quantitative Pedology
AquaBEHEREstimation of Rainy Season Calendar and Soil Water Balance for Agriculture
AQuadtreeConfidentiality of Spatial Point Data
AquaEnvIntegrated Development Toolbox for Aquatic Chemical Model Generation
AQualityWater and Measurements Quality
AquaticLifeHistoryLife History Analysis Tools
aquodomAccess to Aquo domaintables from R (Dutch)
ARAnother Look at the Acceptance-Rejection Method
ar.matrixSimulate Auto Regressive Data from Precision Matricies
arabic2kansujiConvert Arabic Numerals to Kansuji
arabicStemRArabic Stemmer for Text Analysis
araknoARAchnid KNowledge Online
ArArReduxRigorous Data Reduction and Error Propagation of Ar40 / Ar39 Data
arcAssociation Rule Classification
ARCensRegFitting Univariate Censored Linear Regression Model with Autoregressive Errors
arcgeocoderGeocoding with the 'ArcGIS' REST API Service
arcgisArcGIS Location Services Meta-Package
arcgisgeocodeA Robust Interface to ArcGIS 'Geocoding Services'
arcgislayersAn Interface to ArcGIS Data Services
arcgisplacesSearch for POIs using ArcGIS 'Places Service'
arcgisutilsArcGIS Utility Functions
ArchaeoPhasesPost-Processing of Markov Chain Monte Carlo Simulations for Chronological Modelling
ArchaeoPhases.datasetData Sets for 'ArchaeoPhases' Vignettes
archdataExample Datasets from Archaeological Research
archeofragRefitting and Spatial Analysis in Archaeology
archeoVizVisualisation, Exploration, and Web Communication of Archaeological Spatial Data
archetypalFinds the Archetypal Analysis of a Data Frame
archetyperAn Archetype for Data Mining and Data Science Projects
archetypesArchetypal Analysis
archiDARTPlant Root System Architecture Analysis Using DART and RSML Files
archiveMulti-Format Archive and Compression Support
archiveRetrieverRetrieve Archived Web Pages from the 'Internet Archive'
archivistTools for Storing, Restoring and Searching for R Objects
archivist.githubTools for Archiving, Managing and Sharing R Objects via GitHub
ArCoArtificial Counterfactual Package
ARCokrigAutoregressive Cokriging Models for Multifidelity Codes
arcpbfProcess ArcGIS Protocol Buffer FeatureCollections
arcpullrPull Data from an 'ArcGIS REST' API
arcpyInterface to 'ArcGIS' 'Python' Modules
arctoolsProcessing and Physical Activity Summaries of Minute Level Activity Data
ArDecTime Series Autoregressive-Based Decomposition
ARDLARDL, ECM and Bounds-Test for Cointegration
ardl.nardlLinear and Nonlinear Autoregressive Distributed Lag Models: General-to-Specific Approach
ardsCreates Analysis Results Datasets
areaCalculate Area of Triangles and Polygons
areabiplotArea Biplot
arealAreal Weighted Interpolation
arealDBHarmonise and Integrate Heterogeneous Areal Data
areaplotPlot Stacked Areas and Confidence Bands as Filled Polygons
arena2rPlots, Summary Statistics and Tools for Arena Simulation Users
arenarArena for the Exploration and Comparison of any ML Models
arfAdversarial Random Forests
arfimaFractional ARIMA (and Other Long Memory) Time Series Modeling
argoAccurate Estimation of Influenza Epidemics using Google Search Data
argoFloatsAnalysis of Oceanographic Argo Floats
argonDashArgon Shiny Dashboard Template
argonRR Interface to Argon HTML Design
ARGOSAutomatic Regression for Governing Equations (ARGOS)
argosfilterArgos Locations Filter
argparseCommand Line Optional and Positional Argument Parser
argparserCommand-Line Argument Parser
argusRandom Variate Generator for the Argus Distribution
ARHTAdaptable Regularized Hotelling's T^2 Test for High-Dimensional Data
ariAutomated R Instructor
ARIbrainAll-Resolution Inference
aricodeEfficient Computations of Standard Clustering Comparison Measures
AriGaMyANNSVRHybrid ARIMA-GARCH and Two Specially Designed ML-Based Models
arima2Likelihood Based Inference for ARIMA Modeling
ARIMAANNTime Series Forecasting using ARIMA-ANN Hybrid Model
arkdbArchive and Unarchive Databases Using Flat Files
arkheTools for Cleaning Rectangular Data
armData Analysis Using Regression and Multilevel/Hierarchical Models
ARMALSTMFitting of Hybrid ARMA-LSTM Models
armsppAdaptive Rejection Metropolis Sampling (ARMS) via 'Rcpp'
arnie"Arnie" box office records 1982-2014
AROCCovariate-Adjusted Receiver Operating Characteristic Curve Inference
aroma.affymetrixAnalysis of Large Affymetrix Microarray Data Sets
aroma.apdA Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated]
aroma.cnCopy-Number Analysis of Large Microarray Data Sets
aroma.coreCore Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework
ArothronGeometric Morphometric Methods and Virtual Anthropology Tools
ARPALDataRetrieving and Analyzing Air Quality and Weather Data from ARPA Lombardia
ARpLMECCensored Mixed-Effects Models with Different Correlation Structures
ARPobservationTools for Simulating Direct Behavioral Observation Recording Procedures Based on Alternating Renewal Processes
arprAdvanced R Pipes
aRpsDCAArps Decline Curve Analysis in R
arrangementsFast Generators and Iterators for Permutations, Combinations, Integer Partitions and Compositions
arrApplyApply a Function to a Margin of an Array
arrayhelpersConvenience Functions for Arrays
arrowIntegration to 'Apache' 'Arrow'
arrowheadrMake Custom Arrowheads
arsAdaptive Rejection Sampling
arseArea of Resilience to Stress Event
arsenalAn Arsenal of 'R' Functions for Large-Scale Statistical Summaries
ARTAligned Rank Transform for Nonparametric Factorial Analysis
artfimaARTFIMA Model Estimation
arthistoryArt History Textbook Data
ARTofRTo Insert Title, Divider, and Block of Comments
ARToolAligned Rank Transform
artpackCreates Generative Art Data
aRtsyGenerative Art with 'ggplot2'
arulesMining Association Rules and Frequent Itemsets
arulesCBAClassification Based on Association Rules
arulesNBMinerMining NB-Frequent Itemsets and NB-Precise Rules
arulesSequencesMining Frequent Sequences
arulesVizVisualizing Association Rules and Frequent Itemsets
ARUtoolsManagement and Processing of Autonomous Recording Unit (ARU) Data
aRxivInterface to the arXiv API
asaurData Sets for "Applied Survival Analysis Using R""
asbioA Collection of Statistical Tools for Biologists
ascentTrainingAscent Training Datasets
asciiExport R Objects to Several Markup Languages
asciicastCreate 'Ascii' Screen Casts from R Scripts
asciichartrLightweight ASCII Line Graphs
asciirulerRender an ASCII Ruler
asciiSetupReaderReads Fixed-Width ASCII Data Files (.txt or .dat) that Have Accompanying Setup Files (.sps or .sas)
ascotraceRSimulate the Spread of Ascochyta Blight in Chickpea
asdSimulations for Adaptive Seamless Designs
asdreaderReading ASD Binary Files in R
ASGS.foyerInterface to the Australian Statistical Geography Standard
ashDavid Scott's ASH Routines
ashapesamplerGenerating Alpha Shapes
ashrMethods for Adaptive Shrinkage, using Empirical Bayes
ashtApplied Statistical Hypothesis Tests
AsioHeaders'Asio' C++ Header Files
askgptAsking GPT About R Stuff
askpassPassword Entry Utilities for R, Git, and SSH
aslibInterface to the Algorithm Selection Benchmark Library
asmOptimal Convex M-Estimation for Linear Regression via Antitonic Score Matching
ASMapLinkage Map Construction using the MSTmap Algorithm
asmbPLSPredicting and Classifying Patient Phenotypes with Multi-Omics Data
asnipeAnimal Social Network Inference and Permutations for Ecologists
aspaceFunctions for Estimating Centrographic Statistics
aspectA General Framework for Multivariate Analysis with Optimal Scaling
aspiAnalysis of Symmetry of Parasitic Infections
asplineSpline Regression with Adaptive Knot Selection
aSPUAdaptive Sum of Powered Score Test
asremlPlusAugments 'ASReml-R' in Fitting Mixed Models and Packages Generally in Exploring Prediction Differences
ASRgenomicsComplementary Genomic Functions
ASSAApplied Singular Spectrum Analysis (ASSA)
assertValidate Function Arguments
assertableVerbose Assertions for Tabular Data (Data.frames and Data.tables)
assertionsSimple Assertions for Beautiful and Customisable Error Messages
assertrAssertive Programming for R Analysis Pipelines
assertthatEasy Pre and Post Assertions
assessorAssessment Tools for Regression Models with Discrete and Semicontinuous Outcomes
AssetAllocationBacktesting Simple Asset Allocation Strategies
AssetCorrEstimating Asset Correlations from Default Data
AssetPricingOptimal Pricing of Assets with Fixed Expiry Date
assignPOPPopulation Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework
assignRInfer Geographic Origin from Isotopic Data
assistA Suite of R Functions Implementing Spline Smoothing Techniques
ASSISTantAdaptive Subgroup Selection in Group Sequential Trials
AssocAFCAllele Frequency Comparison
AssocBinMeasuring Association with Recursive Binning
assocIndImplements New and Existing Association Indices for Constructing Animal Social Networks
AssocTestsGenetic Association Studies
assortnetCalculate the Assortativity Coefficient of Weighted and Binary Networks
ASTAge-Spatial-Temporal Model
ast2astTranslates an R Function to a C++ Function
asterAster Models
aster2Aster Models
asteRiskComputation of Satellite Position
AsthmaNHANESAsthma Data Sets from NHANES
astrochronA Computational Tool for Astrochronology
astrodatRAstronomical Data
astroFnsAstronomy: Time and Position Functions, Misc. Utilities
astsaApplied Statistical Time Series Analysis
asusAdaptive SURE Thresholding Using Side Information
ASVStochastic Volatility Models with or without Leverage
AsyKKernel Density Estimation
asylumData on Asylum and Resettlement for the UK
asymLDAsymmetric Linkage Disequilibrium (ALD) for Polymorphic Genetic Data
AsymmetricSORDsAsymmetric Second Order Rotatable Designs (AsymmetricSORDs)
asymmetryMultidimensional Scaling of Asymmetric Proximities
asymmetry.measuresAsymmetry Measures for Probability Density Functions
asympTestA Simple R Package for Classical Parametric Statistical Tests and Confidence Intervals in Large Samples
asymptorEstimate Asymptomatic Cases via Capture/Recapture Methods
asyncCoroutines: Generators / Yield, Async / Await, and Streams
AsynchLongRegression Analysis of Sparse Asynchronous Longitudinal Data
ataAutomated Test Assembly
atableCreate Tables for Reporting Clinical Trials
ATAforecastingAutomatic Time Series Analysis and Forecasting using the Ata Method
atakrigArea-to-Area Kriging
ATboundsBounding Treatment Effects by Limited Information Pooling
AteMeVsAverage Treatment Effects with Measurement Error and Variable Selection for Confounders
atimeAsymptotic Timing
atlasStanford 'ATLAS' Search Engine API
AtlasMakerMake Multiple 'leaflet' Maps in 'Shiny'
AtmChileDownload Air Quality and Meteorological Information of Chile
ATNrRun Allometric Trophic Networks Models
atom4RTools to Handle and Publish Metadata as 'Atom' XML Format
atpolRATPOL Grid Implementation
ATRAlternative Tree Representation
atrrrWrapper for the 'AT' Protocol Behind 'Bluesky'
aTSAAlternative Time Series Analysis
attachmentDeal with Dependencies
attemptTools for Defensive Programming
attentionSelf-Attention Algorithm
attenuationCorrecting for Attenuation Due to Measurement Error
attribAttributable Burden of Disease
AUCThreshold Independent Performance Measures for Probabilistic Classifiers
auctestrStatistical Testing for AUC Data
auctionrEstimate First-Price Auction Model
audioAudio Interface for R
audiometryStandard Conform Pure Tone Audiometry (PTA) Plots
auditBounds for Accounting Populations
auditorModel Audit - Verification, Validation, and Error Analysis
audrexAutomatic Dynamic Regression using Extreme Gradient Boosting
audubonJapanese Text Processing Tools
augmentedRCBDAnalysis of Augmented Randomised Complete Block Designs
augSIMEXAnalysis of Data with Mixed Measurement Error and Misclassification in Covariates
aukeBird Data Extraction and Processing in R
aumArea Under Minimum of False Positives and Negatives
AurieLSHGaussianCreates a Neighbourhood Using Locality Sensitive Hashing for Gaussian Projections
auRocVarious Methods to Estimate the AUC
ausplotsRTERN AusPlots Australian Ecosystem Monitoring Data
AustralianPoliticiansProvides Datasets About Australian Politicians
AUtestsApproximate Unconditional and Permutation Tests
auth0Authentication in Shiny with Auth0
auto.pcaAutomatic Variable Reduction Using Principal Component Analysis
AutoAdsAdvertisement Metrics Calculation
autoBaggingLearning to Rank Bagging Workflows with Metalearning
autocogsAutomatic Cognostic Summaries
autoCovariateSelectionAutomated Covariate Selection Using HDPS Algorithm
AutoDeskRAn Interface to the 'AutoDesk' 'API' Platform
autoEnsembleAutomated Stacked Ensemble Classifier for Severe Class Imbalance
autoFCAutomatic Construction of Forced-Choice Tests
autoFRKAutomatic Fixed Rank Kriging
autoGOAuto-GO: Reproducible, Robust and High Quality Ontology Enrichment Visualizations
autoharpSemi-Automatic Grading of R and Rmd Scripts
autohrfAutomated Generation of Data-Informed GLM Models in Task-Based fMRI Data Analysis
autoimageMultiple Heat Maps for Projected Coordinates
autokerasR Interface to 'AutoKeras'
automagicAutomagically Document and Install Packages Necessary to Run R Code
automapAutomatic Interpolation Package
autoMFAAlgorithms for Automatically Fitting MFA Models
automlDeep Learning with Metaheuristic
autoMrPImproving MrP with Ensemble Learning
autonewsmdAuto-Generate Changelog using Conventional Commits
AutoPipeAutomated Transcriptome Classifier Pipeline: Comprehensive Transcriptome Analysis
autoplotlyAutomatic Generation of Interactive Visualizations for Statistical Results
AutoplotproteinDevelopment of Visualization Tools for Protein Sequence
AutoPlotsCreating Echarts Visualizations as Easy as Possible
autoRaschSemi-Automated Rasch Analysis
autoRegAutomatic Linear and Logistic Regression and Survival Analysis
AutoregressionMDEMinimum Distance Estimation in Autoregressive Model
AutoScoreAn Interpretable Machine Learning-Based Automatic Clinical Score Generator
autoScorecardFully Automatic Generation of Scorecards
AutoseedRetrieve Disease-Related Genes from Public Sources
autoshinyAutomatic Transformation of an 'R' Function into a 'shiny' App
autostatsAuto Stats
AutoStepwiseGLMBuilds Stepwise GLMs via Train and Test Approach
autostsmAutomatic Structural Time Series Models
autothresholdrAn R Port of the 'ImageJ' Plugin 'Auto Threshold'
AutoTransQFA Novel Automatic Shifted Log Transformation
autoTSAutomatic Model Selection and Prediction for Univariate Time Series
autoviAuto Visual Inference with Computer Vision Models
AutoWeatherIndicesCalculating Weather Indices
avWorking with Audio and Video in R
availableCheck if the Title of a Package is Available, Appropriate and Interesting
avarAllan Variance
averiskCalculation of Average Population Attributable Fractions and Confidence Intervals
avesperuAccess to the List of Birds Species of Peru
AVGASA Variable Selection using Genetic Algorithms
avidaRA Computational Biologist’s Toolkit To Get Data From 'avidaDB'
AvInertiaCalculate the Inertial Properties of a Flying Bird
aVirtualTwinsAdaptation of Virtual Twins Method from Jared Foster
avocadoWeekly Hass Avocado Sales Summary
avotrexA Global Dataset of Anthropogenic Extinct Birds and their Traits: Phylogeny Builder
aweekConvert Dates to Arbitrary Week Definitions
aweSOMInteractive Self-Organizing Maps
awinRGet Data from 'Awin' via the 'Windsor.ai' API
AWR'AWS' Java 'SDK' for R
AWR.KinesisAmazon 'Kinesis' Consumer Application for Stream Processing
awsAdaptive Weights Smoothing
aws.alexaClient for the Amazon Alexa Web Information Services API
aws.comprehendClient for 'AWS Comprehend'
aws.ec2metadataGet EC2 Instance Metadata
aws.ecxCommunicating with AWS EC2 and ECS using AWS REST APIs
aws.iamAWS IAM Client Package
aws.kms'AWS Key Management Service' Client Package
aws.lambdaAWS Lambda Client Package
aws.pollyClient for AWS Polly
aws.s3'AWS S3' Client Package
aws.signatureAmazon Web Services Request Signatures
aws.transcribeClient for 'AWS Transcribe'
aws.translateClient for 'AWS Translate'
aws.wrfsmnData Processing of SMN Hi-Res Weather Forecast from 'AWS'
awsMethodsClass and Methods Definitions for Packages 'aws', 'adimpro', 'fmri', 'dwi'
axisandalliesAxis and Allies Spring
AZIADAnalyzing Zero-Inflated and Zero-Altered Data
azlogrLogging in 'R' and Post to 'Azure Log Analytics' Workspace
AzureAppInsightsInclude Azure Application Insights in Shiny Apps
AzureAuthAuthentication Services for Azure Active Directory
AzureCognitiveInterface to Azure Cognitive Services
AzureContainersInterface to 'Container Instances', 'Docker Registry' and 'Kubernetes' in 'Azure'
AzureCosmosRInterface to the 'Azure Cosmos DB' 'NoSQL' Database Service
AzureGraphSimple Interface to 'Microsoft Graph'
AzureKeyVaultKey and Secret Management in 'Azure'
AzureKustoInterface to 'Kusto'/'Azure Data Explorer'
azuremlsdkInterface to the 'Azure Machine Learning' 'SDK'
AzureQstorInterface to 'Azure Queue Storage'
AzureRMRInterface to 'Azure Resource Manager'
AzureStorStorage Management in 'Azure'
AzureTableStorInterface to the Table Storage Service in 'Azure'
AzureVisionInterface to Azure Computer Vision Services
AzureVMVirtual Machines in 'Azure'
AzureVMmetadataInterface to Azure Virtual Machine Instance Metadata
b64Fast and Vectorized Base 64 Engine
babelRibosome Profiling Data Analysis
babelgeneGene Orthologs for Model Organisms in a Tidy Data Format
babelmixr2Use 'nlmixr2' to Interact with Open Source and Commercial Software
babelwhaleTalking to 'Docker' and 'Singularity' Containers
babetteControl 'BEAST2'
babynamesUS Baby Names 1880-2017
babynamesILIsrael Baby Names 1948-2022
BACCOBayesian Analysis of Computer Code Output (BACCO)
BACCTBayesian Augmented Control for Clinical Trials
bacistoolBayesian Classification and Information Sharing (BaCIS) Tool for the Design of Multi-Group Phase II Clinical Trials
backboneExtracts the Backbone from Graphs
backpipeBackward Pipe (Right-to-Left) Operator
backportsReimplementations of Functions Introduced Since R-3.0.0
backShiftLearning Causal Cyclic Graphs from Unknown Shift Interventions
backtestExploring Portfolio-Based Conjectures About Financial Instruments
bacondecompGoodman-Bacon Decomposition
BACpriorChoice of Omega in the BAC Algorithm
bacrBayesian Adjustment for Confounding
badgenFast and Simple Badge Generator
badgerBadge for R Package
bafBlock Assignment Files
baffleMake Waffle Plots with Base Graphics
bagged.outliertreesRobust Explainable Outlier Detection Based on OutlierTree
baggrBayesian Aggregate Treatment Effects
BAGofTA Binary Regression Adaptive Goodness-of-Fit Test (BAGofT)
baguetteEfficient Model Functions for Bagging
bagyoPhilippine Tropical Cyclones Data
bahcFilter Covariance and Correlation Matrices with Bootstrapped-Averaged Hierarchical Ansatz
bainBayes Factors for Informative Hypotheses
baizerUseful Functions for Data Processing
bakeoffData from "The Great British Bake Off"
baker"Nested Partially Latent Class Models"
bakRAnalyze and Compare Nucleotide Recoding RNA Sequencing Datasets
BalanceCheckBalance Check for Multiple Covariates in Matched Observational Studies
BalancedSamplingBalanced and Spatially Balanced Sampling
baldurBayesian Hierarchical Modeling for Label-Free Proteomics
BallStatistical Inference and Sure Independence Screening via Ball Statistics
BALLIExpression RNA-Seq Data Analysis Based on Linear Mixed Model
BallMapperThe Ball Mapper Algorithm
BaMFunctions and Datasets for "Bayesian Methods: A Social and Behavioral Sciences Approach"
bamaHigh Dimensional Bayesian Mediation Analysis
BAMBIBivariate Angular Mixture Models
bambooHRA Wrapper to the 'BambooHR' API
bamditBayesian Meta-Analysis of Diagnostic Test Data
bamlssBayesian Additive Models for Location, Scale, and Shape (and Beyond)
bammSpecies Distribution Models as a Function of Biotic, Abiotic and Movement Factors (BAM)
BAMMtoolsAnalysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees
bampBayesian Age-Period-Cohort Modeling and Prediction
BANAMBayesian Analysis of the Network Autocorrelation Model
bandicootLight-Weight 'python'-Like Object-Oriented System
banditFunctions for Simple a/B Split Test and Multi-Armed Bandit Analysis
banditpamAlmost Linear-Time k-Medoids Clustering
bandsfdpCompute Upper Prediction Bounds on the FDP in Competition-Based Setups
banffITAutomatize Diagnosis Standardized Assignation Using the Banff Classification
bangBayesian Analysis, No Gibbs
bangladeshProvides Ready to Use Shapefiles for Geographical Map of Bangladesh
bannerCommenterMake Banner Comments with a Consistent Format
BANOVAHierarchical Bayesian ANOVA Models
banterBioAcoustic eveNT classifiER
banxicoRDownload Data from the Bank of Mexico
baoristaBayesian Aoristic Analyses
bapredBatch Effect Removal and Addon Normalization (in Phenotype Prediction using Gene Data)
BARBayesian Adaptive Randomization
BarBorGradientFunction Minimum Approximator
barcodeRender Barcode Distribution Plots
baRcodeRLabel Creation for Tracking and Collecting Data from Biological Samples
BarcodingRSpecies Identification using DNA Barcodes
bardrComplete Works of William Shakespeare in Tidy Format
barkBayesian Additive Regression Kernels
BarnardBarnard's Unconditional Test
BARTBayesian Additive Regression Trees
bartCauseCausal Inference using Bayesian Additive Regression Trees
bartcsBayesian Additive Regression Trees for Confounder Selection
bartMachineBayesian Additive Regression Trees
bartMachineJARsbartMachine JARs
bartManCreate Visualisations for BART Models
BASBayesian Variable Selection and Model Averaging using Bayesian Adaptive Sampling
basadBayesian Variable Selection with Shrinking and Diffusing Priors
base.rmsConvert Regression Between Base Function and 'rms' Package
base64Base64 Encoder and Decoder
base64encTools for base64 encoding
base64urlFast and URL-Safe Base64 Encoder and Decoder
baseballrAcquiring and Analyzing Baseball Data
basecambUtilities for Streamlined Data Import, Imputation and Modelling
basedosdados'Base Dos Dados' R Client
basefunInfrastructure for Computing with Basis Functions
baselineBaseline Correction of Spectra
basemapsAccessing Spatial Basemaps in R
basemodelsBaseline Models for Classification and Regression
baseqBasic Sequence Processing Tool for Biological Data
BaseSetWorking with Sets the Tidy Way
BaseTempSeedEstimation of Seed Germination Base Temperature in Thermal Modelling
basethemeThemes for Base Graphics Plots
basfPlot Simple Features with 'base' Sensibilities
basicdrmFit Hill Dose Response Models
basicMCMCplotsTrace Plots, Density Plots and Chain Comparisons for MCMC Samples
basictablerConstruct Rich Tables for Output to 'HTML'/'Excel'
basifoRRetrieval and Processing of the Spanish National Forest Inventory
BASiNETClassification of RNA Sequences using Complex Network Theory
BASiNETEntropyClassification of RNA Sequences using Complex Network and Information Theory
BaSkeProBayesian Model to Archaeological Faunal Skeletal Profiles
basketBasket Trial Analysis
BasketballAnalyzeRAnalysis and Visualization of Basketball Data
baskexactAnalytical Calculation of Basket Trial Operating Characteristics
basksimSimulation-Based Calculation of Basket Trial Operating Characteristics
BASSBayesian Adaptive Spline Surfaces
BaSTAAge-Specific Bayesian Survival Trajectory Analysis from Incomplete Census or Capture-Recapture/Recovery Data
BATBiodiversity Assessment Tools
batataManaging Packages Removal and Installation
batchBatching Routines in Parallel and Passing Command-Line Arguments to R
BatchExperimentsStatistical Experiments on Batch Computing Clusters
BatchGetSymbolsDownloads and Organizes Financial Data for Multiple Tickers
BatchJobsBatch Computing with R
batchmeansConsistent Batch Means Estimation of Monte Carlo Standard Errors
batchmixSemi-Supervised Bayesian Mixture Models Incorporating Batch Correction
batchscrBatch Script Helpers
batchtmaBatch Effect Adjustments
batchtoolsTools for Computation on Batch Systems
bateComputes Bias-Adjusted Treatment Effect
batmanConvert Categorical Representations of Logicals to Actual Logicals
batschReal-Time PCR Data Sets by Batsch et al. (2008)
BATSSBayesian Adaptive Trial Simulator Software (BATSS) for Generalised Linear Models
batteryreductionAn R Package for Data Reduction by Battery Reduction
BAwiRAnalysis of Basketball Data
bayclumprBayesian Analysis of Clumped Isotope Datasets
baycnBayesian Inference for Causal Networks
bayefdrBayesian Estimation and Optimisation of Expected False Discovery Rate
BayenetBayesian Quantile Elastic Net for Genetic Study
bayes4psyUser Friendly Bayesian Data Analysis for Psychology
bayesABFast Bayesian Methods for AB Testing
bayesammiBayesian Estimation of the Additive Main Effects and Multiplicative Interaction Model
bayesanovaBayesian Inference in the Analysis of Variance via Markov Chain Monte Carlo in Gaussian Mixture Models
BayesARIMAXBayesian Estimation of ARIMAX Model
bayesassuranceBayesian Assurance Computation
BayesBEKKBayesian Estimation of Bivariate Volatility Model
BayesBinMixBayesian Estimation of Mixtures of Multivariate Bernoulli Distributions
bayesbioMiscellaneous Functions for Bioinformatics and Bayesian Statistics
bayesbootAn Implementation of Rubin's (1981) Bayesian Bootstrap
BayesBPBayesian Estimation using Bernstein Polynomial Fits Rate Matrix
BayesCACEBayesian Model for CACE Analysis
BayesComboBayesian Evidence Combination
BayesCommBayesian Community Ecology Analysis
bayescopularegBayesian Copula Regression
bayescountPower Calculations and Bayesian Analysis of Count Distributions and FECRT Data using MCMC
BayesCRBayesian Analysis of Censored Regression Models Under Scale Mixture of Skew Normal Distributions
bayesCTSimulation and Analysis of Adaptive Bayesian Clinical Trials
BayesCTDesignTwo Arm Bayesian Clinical Trial Design with and Without Historical Control Data
bayesCureRateModelBayesian Cure Rate Modeling for Time-to-Event Data
BayesCVIBayesian Cluster Validity Index
BayesDAFunctions and Datasets for the book "Bayesian Data Analysis"
bayesDccGarchMethods and Tools for Bayesian Dynamic Conditional Correlation GARCH(1,1) Model
BayesDesignBayesian Single-Arm Design with Survival Endpoints
bayesdfaBayesian Dynamic Factor Analysis (DFA) with 'Stan'
BayesDIPBayesian Decreasingly Informative Priors for Early Termination Phase II Trials
BayesDissolutionBayesian Models for Dissolution Testing
bayesdistregBayesian Distribution Regression
BayesDLMfMRIStatistical Analysis for Task-Based Fmri Data
bayesDPImplementation of the Bayesian Discount Prior Approach for Clinical Trials
bayesEOBayesian Smoothing of Remote Sensing Image Classification
BayesESSDetermining Effective Sample Size
BayesFactorComputation of Bayes Factors for Common Designs
BayesFBHborrowBayesian Dynamic Borrowing with Flexible Baseline Hazard Function
BayesFluxRImplementation of Bayesian Neural Networks
BayesFMBayesian Inference for Factor Modeling
BayesfMRISpatial Bayesian Methods for Task Functional MRI Studies
bayesforecastBayesian Time Series Modeling with Stan
bayesGAMFit Multivariate Response Generalized Additive Models using Hamiltonian Monte Carlo
bayesGARCHBayesian Estimation of the GARCH(1,1) Model with Student-t Innovations
BayesGmedBayesian Causal Mediation Analysis using 'Stan'
BayesGOFBayesian Modeling via Frequentist Goodness-of-Fit
BayesGPfitFast Bayesian Gaussian Process Regression Fitting
BayesGrowthEstimate Fish Growth Using MCMC Analysis
BayesGWQSBayesian Grouped Weighted Quantile Sum Regression
bayesianBindings for Bayesian TidyModels
bayesianETASBayesian Estimation of the ETAS Model for Earthquake Occurrences
BayesianFactorZooBayesian Solutions for the Factor Zoo: We Just Ran Two Quadrillion Models
BayesiangammaregBayesian Gamma Regression: Joint Mean and Shape Modeling
BayesianGLassoBayesian Graphical Lasso
BayesianLateralityPredict Brain Asymmetry Based on Handedness and Dichotic Listening
BayesianMCPModSimulate, Evaluate, and Analyze Dose Finding Trials with Bayesian MCPMod
BayesianMediationABayesian Mediation Analysis
BayesianNetworkBayesian Network Modeling and Analysis
BayesianPlatformDesignTimeTrendSimulate and Analyse Bayesian Platform Trial with Time Trend
BayesianPowerSample Size and Power for Comparing Inequality Constrained Hypotheses
BayesianReasoningPlot Positive and Negative Predictive Values for Medical Tests
BayesianToolsGeneral-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics
BayesiantregBayesian t Regression for Modeling Mean and Scale Parameters
bayesianVARsMCMC Estimation of Bayesian Vectorautoregressions
bayesImageSBayesian Methods for Image Segmentation using a Potts Model
BayesLCABayesian Latent Class Analysis
bayesLifeBayesian Projection of Life Expectancy
bayeslmEfficient Sampling for Gaussian Linear Regression with Arbitrary Priors
BayesLNBayesian Inference for Log-Normal Data
BayesLogitPolyaGamma Sampling
bayeslongitudinalAdjust Longitudinal Regression Models Using Bayesian Methodology
bayesmBayesian Inference for Marketing/Micro-Econometrics
BayesMallowsBayesian Preference Learning with the Mallows Rank Model
BayesMassBalBayesian Data Reconciliation of Separation Processes
bayesMeanScaleBayesian Post-Estimation on the Mean Scale
bayesmetaBayesian Random-Effects Meta-Analysis and Meta-Regression
BayesMFSurvBayesian Misclassified-Failure Survival Model
bayesMigBayesian Projection of Migration
bayesmixBayesian Mixture Models with JAGS
BayesMixSurvBayesian Mixture Survival Models using Additive Mixture-of-Weibull Hazards, with Lasso Shrinkage and Stratification
bayesmlogitA Multistate Life Table (MSLT) Methodology Based on Bayesian Approach
BayesMortalityPlusBayesian Mortality Modelling
bayesmoveNon-Parametric Bayesian Analyses of Animal Movement
bayesMRMBayesian Multivariate Receptor Modeling
BayesMultiModeBayesian Mode Inference
BayesMultMetaBayesian Multivariate Meta-Analysis
bayesnecA Bayesian No-Effect- Concentration (NEC) Algorithm
BayesNetBPBayesian Network Belief Propagation
BayesNSGPBayesian Analysis of Non-Stationary Gaussian Process Models
BayesOrdDesignBayesian Group Sequential Design for Ordinal Data
BayesPieceHazSelectVariable Selection in a Hierarchical Bayesian Model for a Hazard Function
bayesplayThe Bayes Factor Playground
bayesplotPlotting for Bayesian Models
bayespmBayesian Statistical Process Monitoring
bayesPOBayesian Inference for Presence-Only Data
bayesPopProbabilistic Population Projection
BayesPostEstGenerate Postestimation Quantities for Bayesian MCMC Estimation
BayesPPDBayesian Power Prior Design
BayesPPDSurvBayesian Power Prior Design for Survival Data
BayesProjectFast Projection Direction for Multivariate Changepoint Detection
bayesQRBayesian Quantile Regression
bayesReconProbabilistic Reconciliation via Conditioning
bayesregBayesian Regression Models with Global-Local Shrinkage Priors
BayesrelBayesian Reliability Estimation
BayesRepBayesian Analysis of Replication Studies
BayesRepDesignBayesian Design of Replication Studies
BayesReversePLLHFits the Bayesian Piecewise Linear Log-Hazard Model
BayesRGMMBayesian Robust Generalized Mixed Models for Longitudinal Data
bayesROEBayesian Regions of Evidence
BayesRSBayes Factors for Hierarchical Linear Models with Continuous Predictors
bayesrulesDatasets and Supplemental Functions from Bayes Rules! Book
bayessBayesian Essentials with R
BayesS5Bayesian Variable Selection Using Simplified Shotgun Stochastic Search with Screening (S5)
BayesSamplingBayes Linear Estimators for Finite Population
BayesSenMCDifferent Models of Posterior Distributions of Adjusted Odds Ratio
BayesSURBayesian Seemingly Unrelated Regression Models in High-Dimensional Settings
bayesSurvBayesian Survival Regression with Flexible Error and Random Effects Distributions
BayesSurvivalBayesian Survival Analysis for Right Censored Data
BayesSurviveBayesian Survival Models for High-Dimensional Data
bayestEffect Size Targeted Bayesian Two-Sample t-Tests via Markov Chain Monte Carlo in Gaussian Mixture Models
bayestestRUnderstand and Describe Bayesian Models and Posterior Distributions
bayesTFRBayesian Fertility Projection
BayesToolsTools for Bayesian Analyses
BayesTreeBayesian Additive Regression Trees
BayesTreePriorBayesian Tree Prior Simulation
BayesTwinBayesian Analysis of Item-Level Twin Data
BayesVarSelBayes Factors, Model Choice and Variable Selection in Linear Models
bayesvlVisually Learning the Graphical Structure of Bayesian Networks and Performing MCMC with 'Stan'
bayesWatchBayesian Change-Point Detection for Process Monitoring with Fault Detection
BayesXR Utilities Accompanying the Software Package BayesX
BayesXsrcDistribution of the 'BayesX' C++ Sources
bayesZIBBayesian Zero-Inflated Bernoulli Regression Model
bayfoxrGlobal Bayesian Foraminifera Core Top Calibration
baygelBayesian Shrinkage Estimators for Precision Matrices in Gaussian Graphical Models
BayLumChronological Bayesian Models Integrating Optically Stimulated Luminescence and Radiocarbon Age Dating
bayMDSBayesian Multidimensional Scaling and Choice of Dimension
baymedrComputation of Bayes Factors for Common Biomedical Designs
baystabilityBayesian Stability Analysis of Genotype by Environment Interaction (GEI)
BAYSTAROn Bayesian Analysis of Threshold Autoregressive Models
baytrendsLong Term Water Quality Trend Analysis
bazarMiscellaneous Basic Functions
BBSolving and Optimizing Large-Scale Nonlinear Systems
bbdetectionIdentification of Bull and Bear States of the Market
BBESTBayesian Estimation of Incoherent Neutron Scattering Backgrounds
BBIBenthic Biotic Indices Calculation from Composition Data
bbkClient for the Deutsche Bundesbank and European Central Bank APIs
bbknnRPerform Batch Balanced KNN in R
bblBoltzmann Bayes Learner
BBmiscMiscellaneous Helper Functions for B. Bischl
bbmixBayesian Model for Genotyping using RNA-Seq
bbmleTools for General Maximum Likelihood Estimation
bbnetCreate Simple Predictive Models on Bayesian Belief Networks
bbotkBlack-Box Optimization Toolkit
bbregBessel and Beta Regressions via Expectation-Maximization Algorithm for Continuous Bounded Data
BBSSLBayesian Bootstrap Spike-and-Slab LASSO
bbwBlocked Weighted Bootstrap
bc3netGene Regulatory Network Inference with Bc3net
BCA1SGBlock Coordinate Ascent with One-Step Generalized Rosen Algorithm
bcabootBias Corrected Bootstrap Confidence Intervals
BCBCSFBias-Corrected Bayesian Classification with Selected Features
bccBeta Control Charts
BCC1997Calculation of Option Prices Based on a Universal Solution
BCClongBayesian Consensus Clustering for Multiple Longitudinal Features
bccpBias Correction under Censoring Plan
BCDAGBayesian Structure and Causal Learning of Gaussian Directed Graphs
bcdataSearch and Retrieve Data from the BC Data Catalogue
BCDatingBusiness Cycle Dating and Plotting Tools
BcDiagDiagnostics Plots for Bicluster Data
BCEABayesian Cost Effectiveness Analysis
BCEEThe Bayesian Causal Effect Estimation Algorithm
bcfCausal Inference using Bayesian Causal Forests
bcfrailphSemiparametric Bivariate Correlated Frailty Models Fit
bcfrailphdvBivariate Correlated Frailty Models with Varied Variances
bcgamBayesian Constrained Generalised Linear Models
BCgeeBias-Corrected Estimates for Generalized Linear Models for Dependent Data
BCHMClinical Trial Calculation Based on BCHM Design
BchronRadiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate Estimation, and Non-Parametric Phase Modelling
BClustLonGA Dirichlet Process Mixture Model for Clustering Longitudinal Gene Expression Data
bcmapsMap Layers and Spatial Utilities for British Columbia
bcmixedMixed Effect Model with the Box-Cox Transformation
bcpaBehavioral Change Point Analysis of Animal Movement
bcputilityWrapper for SQL Server bcp Utility
BCRABreast Cancer Risk Assessment
bcrmBayesian Continual Reassessment Method for Phase I Dose-Escalation Trials
bcROCsurfaceBias-Corrected Methods for Estimating the ROC Surface of Continuous Diagnostic Tests
bcrypt'Blowfish' Password Hashing Algorithm
BCSubA Bayesian Semiparametric Factor Analysis Model for Subtype Identification (Clustering)
BCTBayesian Context Trees for Discrete Time Series
bcvCross-Validation for the SVD (Bi-Cross-Validation)
bdaBinned Data Analysis
BDAlgoBloom Detecting Algorithm
bdcBiodiversity Data Cleaning
bdDwCDarwinizer: Darwin Core (DwC) Field Names Standardization
bdeBounded Density Estimation
BDEsizeEfficient Determination of Sample Size in Balanced Design of Experiments
BDgraphBayesian Structure Learning in Graphical Models using Birth-Death MCMC
bdlInterface and Tools for 'BDL' API
bdlimBayesian Distributed Lag Interaction Models
bdlpTransparent and Reproducible Artificial Data Generation
bdotsBootstrapped Differences of Time Series
BDP2Bayesian Adaptive Designs for Phase II Trials with Binary Endpoint
bdparBig Data Preprocessing Architecture
bdpvInference and Design for Predictive Values in Diagnostic Tests
bdrcBayesian Discharge Rating Curves
bdribsBayesian Detection of Potential Risk Using Inference on Blinded Safety Data
bdscaleRemove Weekends and Holidays from ggplot2 Axes
bdsmatrixRoutines for Block Diagonal Symmetric Matrices
bdsvdBlock Structure Detection Using Singular Vectors
bdvisBiodiversity Data Visualizations
BDWregBayesian Inference for Discrete Weibull Regression
BEBioequivalence Study Data Analysis
bea.RBureau of Economic Analysis API
BEACHBiometric Exploratory Analysis Creation House
beadplexrAnalysis of Multiplex Cytometric Bead Assays
beakrA Minimalist Web Framework for R
beanplotVisualization via Beanplots (Like Boxplot/Stripchart/Violin Plot)
beansData on Dried Beans
beanzBayesian Analysis of Heterogeneous Treatment Effect
bearishTraderTrading Strategies for Bearish Outlook
beastBayesian Estimation of Change-Points in the Slope of Multivariate Time-Series
beastierCall 'BEAST2'
BeastJarJAR Dependency for MCMC Using 'BEAST'
beasttBayesian Evaluation, Analysis, and Simulation Software Tools for Trials
beautier'BEAUti' from R
beaverBayesian Model Averaging of Covariate Adjusted Negative-Binomial Dose-Response
BEDBiological Entity Dictionary (BED)
BEDASSLEQuantifies Effects of Geo/Eco Distance on Genetic Differentiation
BEDMatrixExtract Genotypes from a PLINK .bed File
bedrGenomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix'
BeeBDCOccurrence Data Cleaning
beecaBinary Endpoint Estimation with Covariate Adjustment
BeeGUTSGeneral Unified Threshold Model of Survival for Bees using Bayesian Inference
beeprEasily Play Notification Sounds on any Platform
beeswarmThe Bee Swarm Plot, an Alternative to Stripchart
beezdemandBehavioral Economic Easy Demand
beezdiscountingBehavioral Economic Easy Discounting
befprojMakes a Local Population Projection
behaviorchangeTools for Behavior Change Researchers and Professionals
behavrCanonical Data Structure for Behavioural Data
BEKKsMultivariate Conditional Volatility Modelling and Forecasting
belexDownload Historical Data from the Belgrade Stock Exchange
belgBoltzmann Entropy of a Landscape Gradient
BElikelihoodLikelihood Method for Evaluating Bioequivalence
bellregCount Regression Models Based on the Bell Distribution
benchHigh Precision Timing of R Expressions
benchden28 Benchmark Densities from Berlinet/Devroye (1994)
BenchmarkingBenchmark and Frontier Analysis Using DEA and SFA
benchmarkmeCrowd Sourced System Benchmarks
benchmarkmeDataData Set for the 'benchmarkme' Package
benchrHigh Precise Measurement of R Expressions Execution Time
BENDBayesian Estimation of Nonlinear Data (BEND)
benderBender Client
benfordBenford's Analysis on Large Data Sets
benford.analysisBenford Analysis for Data Validation and Forensic Analytics
BenfordTestsStatistical Tests for Evaluating Conformity to Benford's Law
BENMMIBenthic Multi-Metric Index
bennuBayesian Estimation of Naloxone Kit Number Under-Reporting
bentcableARBent-Cable Regression for Independent Data or Autoregressive Time Series
benthosMarine Benthic Ecosystem Analysis
BeQutBayesian Estimation for Quantile Regression Mixed Models
BergmBayesian Exponential Random Graph Models
BernadetteBayesian Inference and Model Selection for Stochastic Epidemics
berryFunctionsFunction Collection Related to Plotting and Hydrology
bespatialBoltzmann Entropy for Spatial Data
BeSSBest Subset Selection in Linear, Logistic and CoxPH Models
BesselComputations and Approximations for Bessel Functions
bestglmBest Subset GLM and Regression Utilities
besthrGenerating Bootstrap Estimation Distributions of HR Data
BestieBayesian Estimation of Intervention Effects
bestNormalizeNormalizing Transformation Functions
BESTreeBranch-Exclusive Splits Trees
bestridgeA Comprehensive R Package for Best Subset Selection
bestSDPBurden Estimate of Common Communicable Diseases in Settlements of Displaced Populations
BETBinary Expansion Testing
betaBayesBayesian Beta Regression
BetaBitMini Games from Adventures of Beta and Bit
betacalBeta Calibration
betaclustA Family of Beta Mixture Models for Clustering Beta-Valued DNA Methylation Data
betaDeltaConfidence Intervals for Standardized Regression Coefficients
betafunctionsFunctions for Working with Two- And Four-Parameter Beta Probability Distributions and Psychometric Analysis of Classifications
betaMCMonte Carlo for Regression Effect Sizes
betaNBBootstrap for Regression Effect Sizes
betapartPartitioning Beta Diversity into Turnover and Nestedness Components
BetaPASSCalculate Power and Sample Size with Beta Regression
betaperTaxonomic Uncertainty on Multivariate Analyses of Ecological Data
betaregBeta Regression
betaSandwichRobust Confidence Intervals for Standardized Regression Coefficients
betategarchSimulation, Estimation and Forecasting of Beta-Skew-t-EGARCH Models
bethelBethel's algorithm
BETSBrazilian Economic Time Series
bets.covid19The BETS Model for Early Epidemic Data
BetterRegBetter Statistics for OLS and Binomial Logistic Regression
BeviMedBayesian Evaluation of Variant Involvement in Mendelian Disease
bexyVisualize and Parse the Output of 'BeXY'
BeyondBenfordCompare the Goodness of Fit of Benford's and Blondeau Da Silva's Digit Distributions to a Given Dataset
beyondWhittleBayesian Spectral Inference for Time Series
bezierToolkit for Bezier Curves and Splines
bfastBreaks for Additive Season and Trend
BFFBayes Factor Functions
BFIBayesian Federated Inference
bfpBayesian Fractional Polynomials
BFpackFlexible Bayes Factor Testing of Scientific Expectations
BFSGet Data from the Swiss Federal Statistical Office
bfslBest-Fit Straight Line
bfsMapsPlot Maps from Switzerland by Swiss Federal Statistical Office
bfwBayesian Framework for Computational Modeling
BGDataA Suite of Packages for Analysis of Big Genomic Data
bgevBimodal GEV Distribution with Location Parameter
bgevaBinary Generalized Extreme Value Additive Models
BGFDBell-G and Complementary Bell-G Family of Distributions
bggAnalyticsBoardGameGeek's Board Game Data Analysis Tools
BGGEBayesian Genomic Linear Models Applied to GE Genome Selection
BGGMBayesian Gaussian Graphical Models
bggumBayesian Estimation of Generalized Graded Unfolding Model Parameters
BGLRBayesian Generalized Linear Regression
bgmfilesExample BGM Files for the Atlantis Ecosystem Model
BGmiscAn R Package for Extended Behavior Genetics Analysis
bgmmGaussian Mixture Modeling Algorithms and the Belief-Based Mixture Modeling
bgmsBayesian Analysis of Networks of Binary and/or Ordinal Variables
BGPhazardMarkov Beta and Gamma Processes for Modeling Hazard Rates
bgsmtrBayesian Group Sparse Multi-Task Regression
bgumbelBimodal Gumbel Distribution
BGVARBayesian Global Vector Autoregressions
bgwBunch-Gay-Welsch Statistical Estimation
BHBoost C++ Header Files
BHAIEstimate the Burden of Healthcare-Associated Infections
BhatGeneral Likelihood Exploration
BHH2Useful Functions for Box, Hunter and Hunter II
bhmBiomarker Threshold Models
bhmbasketBayesian Hierarchical Models for Basket Trials
BHMSMAfMRIBayesian Hierarchical Multi-Subject Multiscale Analysis of Functional MRI (fMRI) Data
bhpmBayesian Hierarchical Poisson Models for Multiple Grouped Outcomes with Clustering
BHSBVARStructural Bayesian Vector Autoregression Models
BIBlinding Assessment Indexes for Randomized, Controlled, Clinical Trials
BiasCorrectorA GUI to Correct Measurement Bias in DNA Methylation Analyses
BiasedUrnBiased Urn Model Distributions
bib2dfParse a BibTeX File to a Data Frame
BiBitRR Wrapper for Java Implementation of BiBit
biblioInteracting with BibTeX Databases
bibliometrixComprehensive Science Mapping Analysis
bibliometrixDataBibliometrix Example Datasets
biblionetworkCreate Different Types of Bibliometric Networks
biblioreferGenerator of Main Scientific References
biblioverlapDocument-Level Matching Between Bibliographic Datasets
BibPlotsPlot Functions for Use in Bibliometrics
bibsBayesian Inference for the Birnbaum-Saunders Distribution
bibtexBibtex Parser
BiCausalityBinary Causality Inference Framework
biClassifyBinary Classification Using Extensions of Discriminant Analysis
biclustBiCluster Algorithms
biclustermdBiclustering with Missing Data
BICORNIntegrative Inference of De Novo Cis-Regulatory Modules
BiDAGBayesian Inference for Directed Acyclic Graphs
bidaskEfficient Estimation of Bid-Ask Spreads from Open, High, Low, and Close Prices
BiDimRegressionCalculates the Bidimensional Regression Between Two 2D Configurations
BIENTools for Accessing the Botanical Information and Ecology Network Database
BifactorIndicesCalculatorBifactor Indices Calculator
bifeBinary Choice Models with Fixed Effects
BIFIEsurveyTools for Survey Statistics in Educational Assessment
bifurcatingrBifurcating Autoregressive Models
bigalgebra'BLAS' and 'LAPACK' Routines for Native R Matrices and 'big.matrix' Objects
biganalyticsUtilities for 'big.matrix' Objects from Package 'bigmemory'
bigassertrAssertion and Message Functions
bigBitsPerform Boolean Operations on Large Numbers
bigchessRead, Write, Manipulate, Explore Chess PGN Files and R API to UCI Chess Engines
bigDFlexibly Format Dates and Times to a Given Locale
bigdatadistDistances for Machine Learning and Statistics in the Context of Big Data
BIGDAWGCase-Control Analysis of Multi-Allelic Loci
bigDMScalable Bayesian Disease Mapping Models for High-Dimensional Data
bigergmFit, Simulate, and Diagnose Hierarchical Exponential-Family Models for Big Networks
bigGPDistributed Gaussian Process Calculations
BIGLBiochemically Intuitive Generalized Loewe Model
biglassoExtending Lasso Model Fitting to Big Data
bigleafPhysical and Physiological Ecosystem Properties from Eddy Covariance Data
biglmBounded Memory Linear and Generalized Linear Models
bigMapBig Data Mapping
bigmatchMaking Optimal Matching Size-Scalable Using Optimal Calipers
bigmdsMultidimensional Scaling for Big Data
bigmemoryManage Massive Matrices with Shared Memory and Memory-Mapped Files
bigmemory.sriA Shared Resource Interface for Bigmemory Project Packages
bignumArbitrary-Precision Integer and Floating-Point Mathematics
bigparallelrEasy Parallel Tools
bigQFQuadratic Forms in Large Matrices
BigQuicBig Quadratic Inverse Covariance Estimation
bigreadrRead Large Text Files
bigRegGeneralized Linear Models (GLM) for Large Data Sets
bigrqueryAn Interface to Google's 'BigQuery' 'API'
bigrquerystorageAn Interface to Google's 'BigQuery Storage' API
bigsimrFast Generation of High-Dimensional Random Vectors
bigsnprAnalysis of Massive SNP Arrays
bigsparserSparse Matrix Format with Data on Disk
bigsplinesSmoothing Splines for Large Samples
bigstatsrStatistical Tools for Filebacked Big Matrices
bigstepStepwise Selection for Large Data Sets
bigSurvSGDBig Survival Analysis Using Stochastic Gradient Descent
bigtabulateTable, Apply, and Split Functionality for Matrix and 'big.matrix' Objects
bigtcrNonparametric Analysis of Bivariate Gap Time with Competing Risks
bigtimeSparse Estimation of Large Time Series Models
bigutilsrUtility Functions for Large-scale Data
BigVARDimension Reduction Methods for Multivariate Time Series
bikeshare14Bay Area Bike Share Trips in 2014
bikm1Co-Clustering Adjusted Rand Index and Bikm1 Procedure for Contingency and Binary Data-Sets
bildA Package for BInary Longitudinal Data
billboardContains Data of Billboard Hot 100 Songs
billboarderCreate Interactive Chart with the JavaScript 'Billboard' Library
bimetsTime Series and Econometric Modeling
BimodalIndexThe Bimodality Index
binancerAPI Client to 'Binance'
BinarizeBinarization of One-Dimensional Data
BinarybalancedCutThreshold Cut Point of Probability for a Binary Classifier Model
BinaryDosageCreates, Merges, and Reads Binary Dosage Files
BinaryEMVSVariable Selection for Binary Data Using the EM Algorithm
BinaryEPPMMean and Scale-Factor Modeling of Under- And Over-Dispersed Binary Data
binaryGPFit and Predict a Gaussian Process Model with (Time-Series) Binary Response
binaryMMFlexible Marginalized Models for Binary Correlated Outcomes
binb'binb' is not 'Beamer'
BINCOREstimate the Correlation Between Two Irregular Time Series
bindaMulti-Class Discriminant Analysis using Binary Predictors
bindataGeneration of Artificial Binary Data
bindrParametrized Active Bindings
bindrcppAn 'Rcpp' Interface to Active Bindings
binequalityMethods for Analyzing Binned Income Data
binfordBinford's Hunter-Gatherer Data
binfunestEstimates Parameters of Functions Driving Binomial Random Variables
bingadsRGet Bing Ads Data via the 'Windsor.ai' API
bingatBinary Graph Analysis Tools
binGroupEvaluation and Experimental Design for Binomial Group Testing
binGroup2Identification and Estimation using Group Testing
BinGSDCalculation for Single Arm Group Sequential Test with Binary Endpoint
binhfHaar-Fisz Functions for Binomial Data
binmanA Binary Download Manager
BinMatProcesses Binary Data Obtained from Fragment Analysis (Such as AFLPs, ISSRs, and RFLPs)
binMtoMany-to-One Comparisons of Proportions
BinNonNorData Generation with Binary and Continuous Non-Normal Components
BinNorSimultaneous Generation of Multivariate Binary and Normal Variates
binomBinomial Confidence Intervals for Several Parameterizations
binomCIConfidence Intervals for a Binomial Proportion
binomialRFBinomial Random Forest Feature Selection
binomialtrendCalculates the Statistical Significance of a Trend in a Set of Measurements
BinOrdNonNorConcurrent Generation of Binary, Ordinal and Continuous Data
binovisualfieldsDepth-Dependent Binocular Visual Fields Simulation
binpackrFast 1d Bin Packing
binrCut Numeric Values into Evenly Distributed Groups
BinSegBstrapPiecewise Smooth Regression by Bootstrapped Binary Segmentation
binsegRcppEfficient Implementation of Binary Segmentation
binseqtestExact Binary Sequential Designs and Analysis
binsmoothGenerate PDFs and CDFs from Binned Data
binsppBayesian Inference for Neyman-Scott Point Processes
binsregBinscatter Estimation and Inference
binstData Preprocessing, Binning for Classification and Regression
BINtoolsBayesian BIN (Bias, Information, Noise) Model of Forecasting
bio.inferPredict Environmental Conditions from Biological Observations
bio3dBiological Structure Analysis
bioacousticsAnalyse Audio Recordings and Automatically Extract Animal Vocalizations
BiObjClassClassification of Algorithms
biobricksAccess Data Dependencies Installed Through 'Biobricks.ai'
bioC.logsBioConductor Package Downloads Stats
BioCircosInteractive Circular Visualization of Genomic Data using 'htmlwidgets' and 'BioCircos.js'
bioclimBioclimatic Analysis and Classification
BiocManagerAccess the Bioconductor Project Package Repository
biocomputeCreate and Manipulate BioCompute Objects
BioCroModular Crop Growth Simulations
BiodemBiodemography Functions
BiodiversityRPackage for Community Ecology and Suitability Analysis
biodosetoolsAn R Shiny Application for Biological Dosimetry
BIOdryMultilevel Modeling of Dendroclimatical Fluctuations
biogasProcess Biogas Data and Predict Biogas Production
biogeomBiological Geometries
biogramN-Gram Analysis of Biological Sequences
biogrowthModelling of Population Growth
BioiBiological Image Analysis
bioimagetoolsTools for Microscopy Imaging
bioinactivationMathematical Modelling of (Dynamic) Microbial Inactivation
BioInsightFilter and Plot RNA Biotypes
biolinkCreate Hyperlinks to Biological Databases and Resources
biologicalActivityIndicesBiological Activity Indices
BioM2Biologically Explainable Machine Learning Framework
BioMarkFind Biomarkers in Two-Class Discrimination Problems
biomartrGenomic Data Retrieval
BIOMASSEstimating Aboveground Biomass and Its Uncertainty in Tropical Forests
biometryassistFunctions to Assist Design and Analysis of Agronomic Experiments
biomod2Ensemble Platform for Species Distribution Modeling
bionetdataBiological and Chemical Data Networks
BioPETBiomarker Prognostic Enrichment Tool
BioPETsurvBiomarker Prognostic Enrichment Tool for Time-to-Event Trial
biopixRExtracting Insights from Biological Images
bioPNSimulation of deterministic and stochastic biochemical reaction networks using Petri Nets
BioPredAn R Package for Biomarkers Analysis in Precision Medicine
BioProbabilityProbability in Biostatistics
bioregionComparison of Bioregionalisation Methods
BioRssayAnalyze Bioassays and Probit Graphs
bios2mdsFrom Biological Sequences to Multidimensional Scaling
biosampleRBiodiversity Index Calculation and Bootstrap Confidence Interval Estimation
biosensors.uscDistributional Data Analysis Techniques for Biosensor Data
bioseqA Toolbox for Manipulating Biological Sequences
biosignalEMGTools for Electromyogram Signals (EMG) Analysis
bioSNRBioacoustic Basic Operations with Decibels and the Passive Sonar Equation
biospearBiomarker Selection in Penalized Regression Models
biostat3Utility Functions, Datasets and Extended Examples for Survival Analysis
BiostatisticsStatistics Tutorials for Biologists
BioStatRInitiation à La Statistique Avec R
BiostatsUHNplusNested Data Summary, Adverse Events and REDCap
bioticCalculation of Freshwater Biotic Indices
biotoolsTools for Biometry and Applied Statistics in Agricultural Science
BioVennCreate Area-Proportional Venn Diagrams from Biological Lists
bipartiteVisualising Bipartite Networks and Calculating Some (Ecological) Indices
bipartiteD3Interactive Bipartite Graphs
BipartiteModularityMaximizationPartition Bipartite Network into Non-Overlapping Biclusters by Optimizing Bipartite Modularity
bipdBayesian Individual Patient Data Meta-Analysis using 'JAGS'
bipl5Construct Reactive Calibrated Axes Biplots
biplotbootGUIBootstrap on Classical Biplots and Clustering Disjoint Biplot
biplotEZEZ-to-Use Biplots
BiplotGUIInteractive Biplots in R
birankrRanking Nodes in Bipartite and Weighted Networks
birdieBayesian Instrumental Regression for Disparity Estimation
birdringMethods to Analyse Ring Re-Encounter Data
birdscanRMigration Traffic Rate Calculation Package for 'Birdscan MR1' Radars
birkMA Birk's Functions
birtrThe R Package for "The Basics of Item Response Theory Using R"
biscaleTools and Palettes for Bivariate Thematic Mapping
BISdataDownload Data from the Bank for International Settlements (BIS)
bisectrTools to find bad commits with git bisect
BiSEpToolkit to Identify Candidate Synthetic Lethality
bispdepStatistical Tools for Bivariate Spatial Dependence Analysis
bisqueApproximate Bayesian Inference via Sparse Grid Quadrature Evaluation (BISQuE) for Hierarchical Models
BisqueRNADecomposition of Bulk Expression with Single-Cell Sequencing
BisRNAAnalysis of RNA Cytosine-5 Methylation
bistablehistoryCumulative History Analysis for Bistable Perception Time Series
bitClasses and Methods for Fast Memory-Efficient Boolean Selections
bit64A S3 Class for Vectors of 64bit Integers
biteBayesian Integrative Models of Trait Evolution
bitmexrR Client for BitMEX
bitopsBitwise Operations
BiTrinABinarization and Trinarization of One-Dimensional Data
bittermelonBitmap Tools
Bivariate.ParetoBivariate Pareto Models
bivariatemapsCreates Bivariate Maps
BivGeoBasu-Dhar Bivariate Geometric Distribution
bivgeomRoy's Bivariate Geometric Distribution
bivpoisBivariate Poisson Distribution
BivRecBivariate Alternating Recurrent Event Data Analysis
BivRegBLSTolerance Interval and EIV Regression - Method Comparison Studies
bivrpBivariate Residual Plots with Simulation Polygons
BivUnifBinGeneration of Bivariate Uniform Data and Its Relation to Bivariate Binary Data
biwaveletConduct Univariate and Bivariate Wavelet Analyses
biwtCompute the Biweight Mean Vector and Covariance & Correlation Matrice
bizdaysBusiness Days Calculations and Utilities
bizicountBivariate Zero-Inflated Count Models Using Copulas
bkmrBayesian Kernel Machine Regression
bkmrhatParallel Chain Tools for Bayesian Kernel Machine Regression
BKTRBayesian Kernelized Tensor Regression
BLABoundary Line Analysis
blackboxBlack Box Optimization and Exploration of Parameter Space
blackmarblerBlack Marble Data and Statistics
blaiseRead and Write FWF Files in the 'Blaise' Format
BlakerCIBlaker's Binomial and Poisson Confidence Limits
BlandAltmanLehPlots (Slightly Extended) Bland-Altman Plots
blandrBland-Altman Method Comparison
blapsrBayesian Inference with Laplace Approximations and P-Splines
blasterNative R Implementation of an Efficient BLAST-Like Algorithm
blastulaEasily Send HTML Email Messages
blatentBayesian Latent Variable Models
blatrSend Emails Using 'Blat' for Windows
blavaanBayesian Latent Variable Analysis
BLCOPBlack-Litterman and Copula Opinion Pooling Frameworks
blenderAnalyze biotic homogenization of landscapes
BlendstatJoint Analysis of Experiments with Mixtures and Random Effects
blindrecalcBlinded Sample Size Recalculation
blindreviewEnables Blind Review of Database
blinkRecord Linkage for Empirically Motivated Priors
blissBayesian Functional Linear Regression with Sparse Step Functions
blmBinomial Linear Regression
blmeBayesian Linear Mixed-Effects Models
blmecoData Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan"
BLModelBlack-Litterman Posterior Distribution
blobA Simple S3 Class for Representing Vectors of Binary Data ('BLOBS')
blockclusterCo-Clustering Package for Binary, Categorical, Contingency and Continuous Data-Sets
BlockCovEstimation of Large Block Covariance Matrices
blockCVSpatial and Environmental Blocking for K-Fold and LOO Cross-Validation
blockForestBlock Forests: Random Forests for Blocks of Clinical and Omics Covariate Data
blocklengthSelect an Optimal Block-Length to Bootstrap Dependent Data (Block Bootstrap)
blockmatrixblockmatrix: Tools to solve algebraic systems with partitioned matrices
BlockMissingDataIntegrating Multi-Source Block-Wise Missing Data in Model Selection
blockmodelingGeneralized and Classical Blockmodeling of Valued Networks
BlockmodelingGUIGUI for the Generalised Blockmodeling of Valued Networks
blockmodelsLatent and Stochastic Block Model Estimation by a 'V-EM' Algorithm
blockrandRandomization for Block Random Clinical Trials
blocksdesignNested and Crossed Block Designs for Factorial and Unstructured Treatment Sets
blockToolsBlock, Assign, and Diagnose Potential Interference in Randomized Experiments
blocsEstimate and Visualize Voting Blocs' Partisan Contributions
blogdownCreate Blogs and Websites with R Markdown
BLOQImpute and Analyze Data with BLOQ Observations
blorrTools for Developing Binary Logistic Regression Models
BLPestimatoRPerforms a BLP Demand Estimation
BLRBayesian Linear Regression
blrmDose Escalation Design in Phase I Oncology Trial Using Bayesian Logistic Regression Modeling
BLRPMStochastic Rainfall Generator Bartlett-Lewis Rectangular Pulse Model
BLRShinyInteractive Document for Working with Binary Logistic Regression Analysis
BLRShiny2Interactive Document for Working with Binary Logistic Regression Analysis
blsBanditData Viewer for Bureau of Labor Statistics Data
blscrapeRAn API Wrapper for the United States Bureau of Labor Statistics
BLSMBayesian Latent Space Model
blsRMake Requests from the Bureau of Labor Statistics API
bltmBayesian Latent Threshold Modeling
bluebikeBlue Bike Comprehensive Data
BlythStillCasellaCIBlyth-Still-Casella Exact Binomial Confidence Intervals
BMABayesian Model Averaging
bmabasketBayesian Model Averaging for Basket Trials
BMAmevtMultivariate Extremes: Bayesian Estimation of the Spectral Measure
bmassBayesian Multivariate Analysis of Summary Statistics
BMconcorCONCOR for Structural- And Regular-Equivalence Blockmodeling
bmemMediation Analysis with Missing Data Using Bootstrap
bmemLavaanMediation Analysis with Missing Data and Non-Normal Data
bmetBayesian Multigroup Equivalence Testing
bmgarchBayesian Multivariate GARCH Models
bmggumBayesian Multidimensional Generalized Graded Unfolding Model
BMiscMiscellaneous Functions for Panel Data, Quantiles, and Printing Results
bmixtureBayesian Estimation for Finite Mixture of Distributions
bmlmBayesian Multilevel Mediation
bmmEasy and Accessible Bayesian Measurement Models Using 'brms'
bmpRead Windows Bitmap (BMP) Images
BMRBr'BMRB' File Downloader
BMRMMAn Implementation of the Bayesian Markov (Renewal) Mixed Models
BMSBayesian Model Averaging Library
bmscstanBayesian Multilevel Single Case Models using 'Stan'
bmstdrBayesian Modeling of Spatio-Temporal Data with R
BMTThe BMT Distribution
BMTARBayesian Approach for MTAR Models with Missing Data
bnclassifyLearning Discrete Bayesian Network Classifiers from Data
bndesrAccess Data from the Brazilian Development Bank (BNDES)
bndovbBounding Omitted Variable Bias Using Auxiliary Data
bnlearnBayesian Network Structure Learning, Parameter Learning and Inference
bnmaBayesian Network Meta-Analysis using 'JAGS'
bnmonitorAn Implementation of Sensitivity Analysis in Bayesian Networks
bnnSurvivalBagged k-Nearest Neighbors Survival Prediction
bnpaBayesian Networks & Path Analysis
BNPdensityFerguson-Klass Type Algorithm for Posterior Normalized Random Measures
BNPmixBayesian Nonparametric Mixture Models
bnpsdSimulate Genotypes from the BN-PSD Admixture Model
BNPTSclustA Bayesian Nonparametric Algorithm for Time Series Clustering
BNrichPathway Enrichment Analysis Based on Bayesian Network
BNSLBayesian Network Structure Learning
BNSPBayesian Non- And Semi-Parametric Model Fitting
bnstructBayesian Network Structure Learning from Data with Missing Values
bnviewerBayesian Networks Interactive Visualization and Explainable Artificial Intelligence
boaBayesian Output Analysis Program (BOA) for MCMC
BoardGamesBoard Games and Tools for Building Board Games
bodenmillerProfiling of Peripheral Blood Mononuclear Cells using CyTOF
BodiBoosting Diversity in Regression Ensembles
bodsrCall the Bus Open Data Service ('BODS') API Through R
bodycompPercent Body Fat Values Using Anthropometric Prediction Equations
boggyReal-Time PCR Data Sets by Boggy et al. (2010)
boilerpipeRInterface to the Boilerpipe Java Library
BOINBayesian Optimal INterval (BOIN) Design for Single-Agent and Drug- Combination Phase I Clinical Trials
boinetConduct Simulation Study of Bayesian Optimal Interval Design with BOIN-ET Family
boiwsaSeasonal Adjustment of Weekly Data
BOJInterface to Bank of Japan Statistics
bolassoModel Consistent Lasso Estimation Through the Bootstrap
boldInterface to Bold Systems API
bolsecBolivian Securities
BolstadFunctions for Elementary Bayesian Inference
Bolstad2Bolstad Functions
BoltzMMBoltzmann Machines with MM Algorithms
bondAnalystMethods for Fixed-Income Valuation, Risk and Return
BondValuationFixed Coupon Bond Valuation Allowing for Odd Coupon Periods and Various Day Count Conventions
BoneProfileRTools to Study Bone Compactness
BonEVAn Improved Multiple Testing Procedure for Controlling False Discovery Rates
bonnAccess INKAR Database
bonsaiModel Wrappers for Tree-Based Models
bonsaiforestShrinkage Based Forest Plots
boodistSome Distributions from the 'Boost' Library and More
bookdownAuthoring Books and Technical Documents with R Markdown
BoolFilterOptimal Estimation of Partially Observed Boolean Dynamical Systems
BoolNetConstruction, Simulation and Analysis of Boolean Networks
BoomBayesian Object Oriented Modeling
boomerDebugging Tools to Inspect the Intermediate Steps of a Call
BoomSpikeSlabMCMC for Spike and Slab Regression
boostingDEAA Boosting Approach to Data Envelopment Analysis
BoostMLRBoosting for Multivariate Longitudinal Responses
boostmtreeBoosted Multivariate Trees for Longitudinal Data
boostrqBoosting Regression Quantiles
bootBootstrap Functions (Originally by Angelo Canty for S)
boot.heterogeneityA Bootstrap-Based Heterogeneity Test for Meta-Analysis
boot.pvalBootstrap p-Values
bootclusterBootstrapping Estimates of Clustering Stability
bootCombCombine Parameter Estimates via Parametric Bootstrap
bootCTBootstrapping the ARDL Tests for Cointegration
bootESBootstrap Confidence Intervals on Effect Sizes
bootf2Simulation and Comparison of Dissolution Profiles
bootGOFBootstrap Based Goodness-of-Fit Tests
bootImputeBootstrap Inference for Multiple Imputation
bootLRBootstrapped Confidence Intervals for (Negative) Likelihood Ratio Tests
BootMRMRBootstrap-MRMR Technique for Informative Gene Selection
bootnetBootstrap Methods for Various Network Estimation Routines
bootPLSBootstrap Hyperparameter Selection for PLS Models and Extensions
BootPRBootstrap Prediction Intervals and Bias-Corrected Forecasting
bootruinA Bootstrap Test for the Probability of Ruin in the Classical Risk Process
bootStepAICBootstrap stepAIC
bootstrapFunctions for the Book "An Introduction to the Bootstrap"
bootstrapFPBootstrap Algorithms for Finite Population Inference
BootstrapQTLBootstrap cis-QTL Method that Corrects for the Winner's Curse
bootsurvBootstrap Methods for Complete Survey Data
bootSVDFast, Exact Bootstrap Principal Component Analysis for High Dimensional Data
bootURBootstrap Unit Root Tests
bootwarNonparametric Bootstrap Test with Pooled Resampling Card Game
BootWPTOSTest Stationarity using Bootstrap Wavelet Packet Tests
BoptbdBayesian Optimal Block Designs
borTransforming Behavioral Observation Records into Data Matrices
boralBayesian Ordination and Regression AnaLysis
borrowrEstimate Causal Effects with Borrowing Between Data Sources
BorutaWrapper Algorithm for All Relevant Feature Selection
BOSOBilevel Optimization Selector Operator
BosonSamplingClassical Boson Sampling
BoSSAA Bunch of Structure and Sequence Analysis
bossRBiomarker Optimal Segmentation System
BOSSregBest Orthogonalized Subset Selection (BOSS)
botor'AWS Python SDK' ('boto3') for R
BoundaryStatsBoundary Overlap Statistics
BoundEdgeworthBound on the Error of the First-Order Edgeworth Expansion
boundingboxCreate a Bounding Box in an Image
boussinesqAnalytic Solutions for (Ground-Water) Boussinesq Equation
boutliersOutlier Detection and Influence Diagnostics for Meta-Analysis
BoutrosLab.plotting.generalFunctions to Create Publication-Quality Plots
boxWrite Reusable, Composable and Modular R Code
box.lintersLinters for 'box' Modules
boxcoxmixBox-Cox-Type Transformations for Linear and Logistic Models with Random Effects
boxfilterFilter Noisy Data
boxlyInteractive Box Plot
boxplotclusterClustering Method Based on Boxplot Statistics
boxplotdblDouble Box Plot for Two-Axes Correlation
boxrInterface for the 'Box.com API'
bpBlood Pressure Analysis in R
bpaBasic Pattern Analysis
bpAccBlood Pressure Device Accuracy Evaluation: Statistical Considerations
bpboundsNonparametric Bounds for the Average Causal Effect Due to Balke and Pearl and Extensions
bpcaBiplot of Multivariate Data Based on Principal Components Analysis
bpcpBeta Product Confidence Procedure for Right Censored Data
bpDirBoxplots for Directional Data
bpgmmBayesian Model Selection Approach for Parsimonious Gaussian Mixture Models
BPMBayesian Purity Model to Estimate Tumor Purity
bpmnRSupport for BPMN (Business Process Management Notation) Models
bpmnVisualizationRVisualize Process Execution Data on 'BPMN' Diagrams
bpnregBayesian Projected Normal Regression Models for Circular Data
bppComputations Around Bayesian Predictive Power
bprFitting Bayesian Poisson Regression
BPrinStratTTECausal Effects in Principal Strata Defined by Antidrug Antibodies
bqrorBayesian Quantile Regression for Ordinal Models
bqtlBayesian QTL Mapping Toolkit
bRacatusA Method to Estimate the Accuracy and Biogeographical Status of Georeferenced Biological Data
BRACEBias Reduction Through Analysis of Competing Events (BRACE)
bracerBrace Expansions
BRACoD.RBRACoD: Bayesian Regression Analysis of Compositional Data
bradaBayesian Response-Adaptive Design Analysis
BradleyTerry2Bradley-Terry Models
braggRCalculate the Revealed Aggregator of Probability Predictions
braidReportsVisualize Combined Action Response Surfaces and Report BRAID Analyses
braidrmFitting Dose Response with the BRAID Combined Action Model
braidsThe Braid Groups
BrailleRImproved Access for Blind Users
BrainConInference the Partial Correlations Based on Time Series Data
brainGraphGraph Theory Analysis of Brain MRI Data
brainKCCARegion-Level Connectivity Network Construction via Kernel Canonical Correlation Analysis
brainRHelper Functions to 'misc3d' and 'rgl' Packages for Brain Imaging
BranchGLMEfficient Best Subset Selection for GLMs via Branch and Bound Algorithms
BranchingSimulation and Estimation for Branching Processes
brandwatchR'Brandwatch' API to R
brantTest for Parallel Regression Assumption
braQCABootstrapped Robustness Assessment for Qualitative Comparative Analysis
brassica1970s BASIC Interpreter
bratteliDeal with Bratteli Graphs
bravoBayesian Screening and Variable Selection
BrazilCrimeAccesses Brazilian Public Security Data from SINESP Since 2015
BrazilMetDownload and Processing of Automatic Weather Stations (AWS) Data of INMET-Brazil
BRBVSVariable Selection and Ranking in Copula Survival Models Affected by General Censoring Scheme
BRcalBoldness-Recalibration of Binary Events
brclimrFetch Zonal Statistics of Weather Indicators for Brazilian Municipalities
BRDTBinomial Reliability Demonstration Tests
breaBayesian Recurrent Events Analysis
breadAnalyze Big Files Without Loading Them in Memory
BREADREstimates Degrees of Relatedness (Up to the Second Degree) for Extreme Low-Coverage Data
breakawaySpecies Richness Estimation and Modeling
breakDownModel Agnostic Explainers for Individual Predictions
breakfastMethods for Fast Multiple Change-Point/Break-Point Detection and Estimation
breakpointAn R Package for Multiple Break-Point Detection via the Cross-Entropy Method
BreakPointsIdentify Breakpoints in Series of Data
breathtestcoreCore Functions to Read and Fit 13c Time Series from Breath Tests
breathteststanStan-Based Fit to Gastric Emptying Curves
bReezeFunctions for Wind Resource Assessment
BRETIGEABrain Cell Type Specific Gene Expression Analysis
brewTemplating Framework for Report Generation
brglmBias Reduction in Binomial-Response Generalized Linear Models
brglm2Bias Reduction in Generalized Linear Models
bricksetInterface with the Brickset API for Getting Data About LEGO Sets
bridgedistAn Implementation of the Bridge Distribution with Logit-Link as in Wang and Louis (2003)
bridgerBridge Hand Generator with Criteria Selector
bridger2Genome-Wide RNA Degradation Analysis Using BRIC-Seq Data
bridgesamplingBridge Sampling for Marginal Likelihoods and Bayes Factors
brifA Tree and Forest Tool for Classification and Regression
briKmeansPackage for Brik, Fabrik and Fdebrik Algorithms to Initialise Kmeans
BRINDAComputation of BRINDA Adjusted Micronutrient Biomarkers for Inflammation
brintonA Graphical EDA Tool
brioBasic R Input Output
briqrInterface to the 'Briq' API
BRISCFast Inference for Large Spatial Datasets using BRISC
briskBayesian Benefit Risk Analysis
BRLBeta Record Linkage
brlrmrBias Reduction with Missing Binary Response
brmBinary Regression Model
brmsBayesian Regression Models using 'Stan'
brms.mmrmBayesian MMRMs using 'brms'
brmsmarginsBayesian Marginal Effects for 'brms' Models
brnnBayesian Regularization for Feed-Forward Neural Networks
BrobdingnagVery Large Numbers in R
BrokenAdaptiveRidgeBroken Adaptive Ridge Regression with Cyclops
brokenstickBroken Stick Model for Irregular Longitudinal Data
brolgarBrowse Over Longitudinal Data Graphically and Analytically in R
bromanKarl Broman's R Code
broomConvert Statistical Objects into Tidy Tibbles
broom.helpersHelpers for Model Coefficients Tibbles
broom.mixedTidying Methods for Mixed Models
brotliA Compression Format Optimized for the Web
BrownDogBrown Dog R Interface
brpopBrazilian Population Estimatives
BrqBayesian Analysis of Quantile Regression Models
brsimBrainerd-Robinson Similarity Coefficient Matrix
bruceRBroadly Useful Convenient and Efficient R Functions
BRugsInterface to the 'OpenBUGS' MCMC Software
bruleeHigh-Level Modeling Functions with 'torch'
brunnermunzel(Permuted) Brunner-Munzel Test
BRVMRetrieve Historical Data of Companies Listed on the 'BRVM' Stock Exchange
brxxBayesian Test Reliability Estimation
bs4cardsGenerate Bootstrap Cards
bs4DashA 'Bootstrap 4' Version of 'shinydashboard'
BSagriSafety Assessment in Agricultural Field Trials
bsamBayesian State-Space Models for Animal Movement
bsamGPBayesian Spectral Analysis Models using Gaussian Process Priors
bscuiBuild SVG Custom User Interface
BSDABasic Statistics and Data Analysis
bsearchtoolsBinary Search Tools
bsgofBirnbaum-Saunders Goodness-of-Fit Test
BSGWBayesian Survival Model with Lasso Shrinkage Using Generalized Weibull Regression
bshazardNonparametric Smoothing of the Hazard Function
bSiModeling and Computing Biogenic Silica ('bSi') from Inland and Pelagic Sediments
bsiconsEasily Work with 'Bootstrap' Icons
bSimsAgent-Based Bird Point Count Simulator
bsitarBayesian Super Imposition by Translation and Rotation Growth Curve Analysis
bskyrInteract with 'Bluesky' Social
BSLBayesian Synthetic Likelihood
bslibCustom 'Bootstrap' 'Sass' Themes for 'shiny' and 'rmarkdown'
BsMDBayes Screening and Model Discrimination
bsnsingBuild Decision Trees with Optimal Multivariate Splits
BSPADATABayesian Proposal to Fit Spatial Econometric Models
BSPBSSBayesian Spatial Blind Source Separation
bspcovBayesian Sparse Estimation of a Covariance Matrix
bspecBayesian Spectral Inference
bsplineB-Spline Interpolation and Regression
bsplinePsdBayesian Nonparametric Spectral Density Estimation Using B-Spline Priors
bsplusAdds Functionality to the R Markdown + Shiny Bootstrap Framework
bspmBridge to System Package Manager
bspmmaBayesian Semiparametric Models for Meta-Analysis
bsregBayesian Spatial Regression Models
BSSBrownian Semistationary Processes
BSSasympAsymptotic Covariance Matrices of Some BSS Mixing and Unmixing Matrix Estimates
bssmBayesian Inference of Non-Linear and Non-Gaussian State Space Models
bssnBirnbaum-Saunders Model
BSSoverSpaceBlind Source Separation for Multivariate Spatial Data using Eigen Analysis
BSSprepWhitening Data as Preparation for Blind Source Separation
bstGradient Boosting
bsToolsCreate HTML Content with Bootstrap 5 Classes and Layouts
bstrlBayesian Streaming Record Linkage
bstsBayesian Structural Time Series
bsubSubmitter and Monitor of the 'LSF Cluster'
bsvarsBayesian Estimation of Structural Vector Autoregressive Models
BSWFitting a Log-Binomial Model using the Bekhit-Schöpe-Wagenpfeil (BSW) Algorithm
bsynthBayesian Synthetic Control
BT(Adaptive) Boosting Trees Algorithm
btbBeyond the Border - Kernel Density Estimation for Urban Geography
BTdecayLassoBradley-Terry Model with Exponential Time Decayed Log-Likelihood and Adaptive Lasso
btergmTemporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood
BTLLassoModelling Heterogeneity in Paired Comparison Data
BTMBiterm Topic Models for Short Text
BTSPASBayesian Time-Stratified Population Analysis
BTSRBounded Time Series Regression
BTtestEstimate the Number of Factors in Large Nonstationary Datasets
BTYDImplementing BTYD Models with the Log Sum Exp Patch
BTYDplusProbabilistic Models for Assessing and Predicting your Customer Base
bubbleHeatmapProduces 'bubbleHeatmap' Plots for Visualising Metabolomics Data
bubblyrBeautiful Bubbles for 'shiny' and 'rmarkdown' Backgrounds
BUCSSBias and Uncertainty Corrected Sample Size
BuddleA Deep Learning for Statistical Classification and Regression Analysis with Random Effects
buildmerStepwise Elimination and Term Reordering for Mixed-Effects Regression
buildrOrganize & Run Build Scripts Comfortably
BuildSysSystem for Building and Debugging C/C++ Dynamic Libraries
bujarBuckley-James Regression for Survival Data with High-Dimensional Covariates
bulkAnalyseRInteractive Shiny App for Bulk Sequencing Data
bulkQCQuality Control and Outlier Identification in Bulk for Multicenter Trials
bulkreadrThe Ultimate Tool for Reading Data in Bulk
bulletcpAutomatic Groove Identification via Bayesian Changepoint Detection
bulletrAlgorithms for Matching Bullet Lands
bullishTraderBullish Trading Strategies Through Graphs
bullwhipgameBullwhip Effect Demo in Shiny
bumblTools for Modeling Bumblebee Colony Growth and Decline
bumblebeeQuantify Disease Transmission Within and Between Population Groups
bunchingEstimate Bunching
bunchrAnalyze Bunching in a Kink or Notch Setting
bundesbankDownload Data from Bundesbank
bundesligRAll Final Tables of the Bundesliga
bundleSerialize Model Objects with a Consistent Interface
bupaRBusiness Process Analysis in R
bupaverseEasily Install and Load the 'bupaverse'
burgle'Burgle': Stealing the Necessary Parts of Model Objects
burnrForest Fire History Analysis
bursaR Wrapper for Bursa Municipality Open Data Portal
BurStFinBurns Statistics Financial
BurStMiscBurns Statistics Miscellaneous
burstsMarkov Model for Bursty Behavior in Streams
busdaterStandard Date Calculations for Business
BusinessDurationCalculates Business Duration Between Two Dates
businessPlanRSimple Modelling Tools for Business Plans
butcherModel Butcher
butterflyOptionsTrading Butterfly Options Strategies
BuyseTestGeneralized Pairwise Comparisons
BvalueB-Value and Empirical Equivalence Bound
BVARHierarchical Bayesian Vector Autoregression
bvarsvBayesian Analysis of a Vector Autoregressive Model with Stochastic Volatility and Time-Varying Parameters
bvartoolsBayesian Inference of Vector Autoregressive and Error Correction Models
BVARverseTidy Bayesian Vector Autoregression
bvharBayesian Vector Heterogeneous Autoregressive Modeling
bvlsThe Stark-Parker algorithm for bounded-variable least squares
bvpaBivariate Pareto Distribution
BVSNLPBayesian Variable Selection in High Dimensional Settings using Nonlocal Priors
bwdBackward Procedure for Change-Point Detection
bWGRBayesian Whole-Genome Regression
BWGSBreedWheat Genomic Selection Pipeline
bwimageDescribe Image Patterns in Natural Structures
BwQuantBandwidth Selectors for Local Linear Quantile Regression
bwsBayesian Weighted Sums
BWStestBaumgartner Weiss Schindler Test of Equal Distributions
bwsToolsTools for Case 1 Best-Worst Scaling (MaxDiff) Designs
bysykkelGet City Bike Data from Norway
bytescircleStatistics About Bytes Contained in a File as a Circle Plot
bzinbBivariate Zero-Inflated Negative Binomial Model Estimator
c060Extended Inference for Lasso and Elastic-Net Regularized Cox and Generalized Linear Models
C19dNUTSDataset of Regional COVID-19 Deaths per 100,000 Pop (NUTS)
c212Methods for Detecting Safety Signals in Clinical Trials Using Body-Systems (System Organ Classes)
c2cCompare Two Classifications or Clustering Solutions of Varying Structure
c2zA Reference Manager
c3'C3.js' Chart Library
c3netInferring Large-Scale Gene Networks with C3NET
C443See a Forest for the Trees
C50C5.0 Decision Trees and Rule-Based Models
caSimple, Multiple and Joint Correspondence Analysis
CA3variantsThree-Way Correspondence Analysis Variants
cabinetsProject Specific Workspace Organization Templates
cabootcrsBootstrap Confidence Regions for Simple and Multiple Correspondence Analysis
caccConjunctive Analysis of Case Configurations
cacheCache and Retrieve Computation Results
cachemCache R Objects with Automatic Pruning
CACIMARCross-Species Analysis of Cell Identities, Markers and Regulations
cacIRTClassification Accuracy and Consistency under Item Response Theory
CaDENCEConditional Density Estimation Network Construction and Evaluation
CADFtestA Package to Perform Covariate Augmented Dickey-Fuller Unit Root Tests
caesarEncrypts and Decrypts Strings
caffsimSimulation of Plasma Caffeine Concentrations by Using Population Pharmacokinetic Model
CAGRCompound Annual Growth Rate
cAIC4Conditional Akaike Information Criterion for 'lme4' and 'nlme'
CAinterprToolsGraphical Aid in Correspondence Analysis Interpretation and Significance Testings
CairoR Graphics Device using Cairo Graphics Library for Creating High-Quality Bitmap (PNG, JPEG, TIFF), Vector (PDF, SVG, PostScript) and Display (X11 and Win32) Output
CAISErComparison of Algorithms with Iterative Sample Size Estimation
calACSCalculations for All Common Subsequences
CALANGOComparative Analysis with Annotation-Based Genomic Components
CalcThemAll.PRMCalculate Pesticide Risk Metric (PRM) Values from Multiple Pesticides...Calc Them All
Calculator.LR.FNsCalculator for LR Fuzzy Numbers
calculusHigh Dimensional Numerical and Symbolic Calculus
calcUniqueSimple Wrapper for Computationally Expensive Functions
calendarCreate, Read, Write, and Work with 'iCalander' Files, Calendars and Scheduling Data
calendRReady to Print Monthly and Yearly Calendars Made with 'ggplot2'
calendRio'calendR' Fork with Additional Features (Backwards Compatible)
CALFCoarse Approximation Linear Function
CALIBERrfimputeMultiple Imputation Using MICE and Random Forest
calibmsmCalibration Plots for the Transition Probabilities from Multistate Models
calibrarAutomated Parameter Estimation for Complex Models
calibrateCalibration of Scatterplot and Biplot Axes
calibrateBinaryCalibration for Computer Experiments with Binary Responses
CalibrateSSBWeighting and Estimation for Panel Data with Non-Response
calibrationbandCalibration Bands
CalibrationCurvesCalibration Performance
calibratorBayesian Calibration of Complex Computer Codes
CalibratRMapping ML Scores to Calibrated Predictions
calidadAssesses the Quality of Estimates Made by Complex Sample Designs
callbackComputes Statistics from Discrimination Experimental Data
callrCall R from R
callsyncRecording Synchronisation, Call Detection and Assignment, Audio Analysis
calmateImproved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation
calmrCanonical Associative Learning Models and their Representations
calpassapiR Interface to Access CalPASS API
CalSimThe Calibration Simplex
CAMANFinite Mixture Models and Meta-Analysis Tools - Based on C.A.MAN
camcorderRecord Your Plot History
CamelUp'CamelUp' Board Game as a Teaching Aid for Introductory Statistics
camerondataDatasets from "Microeconometrics: Methods and Applications" by Cameron and Trivedi
CAMMLCell-Typing using Variance Adjusted Mahalanobis Distances with Multi-Labeling
campaignmanageRConnect to Campaign Manager via the 'Windsor.ai' API
campfinWrangle Campaign Finance Data
campsisGeneric PK/PD Simulation Platform CAMPSIS
campsismodGeneric Implementation of a PK/PD Model
camsRadClient for CAMS Radiation Service
camtrapdpRead and Manipulate Camera Trap Data Packages
camtrapRCamera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses
canadamapsMaps of the Political and Administrative Divisions of Canada
canadianmapsEffortlessly Create Stunning Canadian Maps
canaperCategorical Analysis of Neo- And Paleo-Endemism
cancensusAccess, Retrieve, and Work with Canadian Census Data and Geography
CancerEvolutionVisualizationPublication Quality Phylogenetic Tree Plots
cancerGIAnalyses of Cancer Gene Interaction
CancerGramPrediction of Anticancer Peptides
cancerscreeningStreamline Access to Cancer Screening Data
candiscVisualizing Generalized Canonical Discriminant and Canonical Correlation Analysis
CanekBatch Correction of Single Cell Transcriptome Data
CanopyAccessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing
canprotChemical Analysis of Proteins
cansimAccessing Statistics Canada Data Table and Vectors
CANSIM2RDirectly Extracts Complete CANSIM Data Tables
canvasXpressVisualization Package for CanvasXpress in R
canvasXpress.dataDatasets for the 'canvasXpress' Package
capeCombined Analysis of Pleiotropy and Epistasis for Diversity Outbred Mice
caperComparative Analyses of Phylogenetics and Evolution in R
capitalRCapital Budgeting Analysis, Annuity Loan Calculations and Amortization Schedules
caplCompute and Visualize CAPL-2 Scores and Interpretations
caplotCorrespondence Analysis with Geometric Frequency Interpretation
capmCompanion Animal Population Management
capnCapital Asset Pricing for Nature
CaPO4SimA Virtual Patient Simulator in the Context of Calcium and Phosphate Homeostasis
captrClient for the Captricity API
capusheCAlibrating Penalities Using Slope HEuristics
carCompanion to Applied Regression
caracasComputer Algebra
caRamelAutomatic Calibration by Evolutionary Multi Objective Algorithm
caratCovariate-Adaptive Randomization for Clinical Trials
CARBayesSpatial Generalised Linear Mixed Models for Areal Unit Data
CARBayesdataData Used in the Vignettes Accompanying the CARBayes and CARBayesST Packages
CARBayesSTSpatio-Temporal Generalised Linear Mixed Models for Areal Unit Data
carbonateInteract with 'carbon.js'
carbondateCalibration and Summarisation of Radiocarbon Dates
carcassEstimation of the Number of Fatalities from Carcass Searches
cardCardiovascular and Autonomic Research Design
carDataCompanion to Applied Regression Data Sets
cardidatesIdentification of Cardinal Dates in Ecological Time Series
cardinalRCollection of Data Structures
cardsAnalysis Results Data
cardxExtra Analysis Results Data Utilities
careHigh-Dimensional Regression and CAR Score Variable Selection
care4cmodelCarbon-Related Assessment of Silvicultural Concepts
caRecallGovernment of Canada Vehicle Recalls Database API Wrapper
carelessProcedures for Computing Indices of Careless Responding
caresidCorrespondence Analysis Plot and Associations Visualisation
caretClassification and Regression Training
caretEnsembleEnsembles of Caret Models
caretForecastConformal Time Series Forecasting Using State of Art Machine Learning Algorithms
carfimaContinuous-Time Fractionally Integrated ARMA Process for Irregularly Spaced Long-Memory Time Series Data
cargoDevelop R Packages using Rust
caribouEstimation of Caribou Abundance Based on Radio Telemetry Data
CarletonStatsFunctions for Statistics Classes at Carleton College
CarlsonCarlson Elliptic Integrals and Incomplete Elliptic Integrals
CARMCovariate-Adjusted Adaptive Randomization via Mahalanobis-Distance
CARMECAR-MM Modelling in Stan
CARMSContinuous Time Markov Rate Modeling for Reliability Analysis
caROCContinuous Biomarker Evaluation with Adjustment of Covariates
carolineA Collection of Database, Data Structure, Visualization, and Utility Functions for R
carpenterBuild Common Tables of Summary Statistics for Reports
carrierIsolate Functions for Remote Execution
CARRoTPredicting Categorical and Continuous Outcomes Using One in Ten Rule
carSurvCorrelation-Adjusted Regression Survival (CARS) Scores
cartograflowFiltering Matrix for Flow Mapping
cartogramCreate Cartograms with R
cartogramRContinuous Cartogram
cartographerTurn Place Names into Map Data
cartographrCrafting Print-Ready Maps and Layered Visualizations
cartographyThematic Cartography
casabourseCasablanca Stock Exchange Data
CascadeSelection, Reverse-Engineering and Prediction in Cascade Networks
CascadeDataExperimental Data of Cascade Experiments in Genomics
cascadeSelectA Cascade Select Input for 'Shiny'
CASCORECovariate Assisted Spectral Clustering on Ratios of Eigenvectors
cascsimCasualty Actuarial Society Individual Claim Simulator
casebaseFitting Flexible Smooth-in-Time Hazards and Risk Functions via Logistic and Multinomial Regression
CaseBasedReasoningCase Based Reasoning
CaseCohortCoxSurvivalCase-Cohort Cox Survival Inference
caseMatchIdentify Similar Cases for Qualitative Case Studies
casesStratified Evaluation of Subgroup Classification Accuracy
casinoPlay Casino Games
CASMAPDetection of Statistically Significant Combinations of SNPs in Association Mapping
CASMI'CASMI'-Based Functions
cassandRaFinds Missing Links and Metric Confidence Intervals in Ecological Bipartite Networks
cassowaryrCompute Scagnostics on Pairs of Numeric Variables in a Data Set
CAST'caret' Applications for Spatial-Temporal Models
castorEfficient Phylogenetics on Large Trees
catAnalysis and Imputation of Categorical-Variable Datasets with Missing Values
cat2catHandling an Inconsistently Coded Categorical Variable in a Longitudinal Dataset
cataAnalysis of Check-All-that-Apply (CATA) Data
catalogAccess the 'Spark Catalog' API via 'sparklyr'
CatastRoInterface to the API 'Sede Electronica Del Catastro'
catchCovariate-Adjusted Tensor Classification in High-Dimensions
catcontTest, Identify, Select and Mutate Categorical or Continuous Values
catdapCategorical Data Analysis Program Package
catdataCategorical Data
CatDataAnalysisDatasets for Categorical Data Analysis by Agresti
CatDynFishery Stock Assessment by Catch Dynamics Models
categoryEncodingsCategory Variable Encodings
CatEncodersEncoders for Categorical Variables
catfunCategorical Data Analysis
catiCommunity Assembly by Traits: Individuals and Beyond
catIrtSimulate IRT-Based Computerized Adaptive Tests
catlearnFormal Psychological Models of Categorization and Learning
catmapCase-Control and TDT Meta-Analysis Package
catmaplyHeatmap for Categorical Data using 'plotly'
caToolsTools: Moving Window Statistics, GIF, Base64, ROC AUC, etc
CatPrediOptimal Categorisation of Continuous Variables in Prediction Models
catRGeneration of IRT Response Patterns under Computerized Adaptive Testing
CatRegSolution Paths for Linear and Logistic Regression Models with Categorical Predictors, with SCOPE Penalty
catregsPost-Estimation Functions for Generalized Linear Mixed Models
catsCohort Platform Trial Simulation
catseyesCreate Catseye Plots Illustrating the Normal Distribution of the Means
catsimBinary and Categorical Image Similarity Index
catSurvComputerized Adaptive Testing for Survey Research
CATTThe Cochran-Armitage Trend Test
CATTexactComputation of the p-Value for the Exact Conditional Cochran-Armitage Trend Test
CauchyCPPowerful Test for Survival Data under Non-Proportional Hazards
cauchypcaRobust Principal Component Analysis Using the Cauchy Distribution
cauphyTrait Evolution on Phylogenies Using the Cauchy Process
causactFast, Easy, and Visual Bayesian Inference
causal.decompCausal Decomposition Analysis
causalBatchCausal Batch Effects
causalCmprskNonparametric and Cox-Based Estimation of Average Treatment Effects in Competing Risks
causaldataExample Data Sets for Causal Inference Textbooks
causalDiscoTools for Causal Discovery on Observational Data
causaldrfEstimating Causal Dose Response Functions
causaleffectDeriving Expressions of Joint Interventional Distributions and Transport Formulas in Causal Models
CausalGAMEstimation of Causal Effects with Generalized Additive Models
CausalGPSMatching on Generalized Propensity Scores with Continuous Exposures
causalHyperGraphDrawing Causal Hypergraphs
CausalImpactInferring Causal Effects using Bayesian Structural Time-Series Models
CausalMBSTSMBSTS Models for Causal Inference and Forecasting
CausalMetaRCausally Interpretable Meta-Analysis
CausalModelsCausal Inference Modeling for Estimation of Causal Effects
causaloptimAn Interface to Specify Causal Graphs and Compute Bounds on Causal Effects
causalOTOptimal Transport Weights for Causal Inference
causalPAFCausal Effect for Population Attributable Fractions (PAF)
CausalQueriesMake, Update, and Query Binary Causal Models
causalsensSelection Bias Approach to Sensitivity Analysis for Causal Effects
causalSLSESemiparametric Least Squares Inference for Causal Effects
causalweightEstimation Methods for Causal Inference Based on Inverse Probability Weighting
CausCorCalculate Correlations and Estimate Causality
CautiousLearningControl Charts with Guaranteed In-Control Performance and Cautious Parameters Learning
CAvariantsCorrespondence Analysis Variants
caviarpdCluster Analysis via Random Partition Distributions
CB2CRISPR Pooled Screen Analysis using Beta-Binomial Test
cbaClustering for Business Analytics
cbanalysisCoffee Break Descriptive Analysis
cbassClassification – Bayesian Adaptive Smoothing Splines
CBCgrpsCompare Baseline Characteristics Between Groups
cbcToolsChoice-Based Conjoint Experiment Design Generation and Power Evaluation in R
cbinomContinuous Analog of a Binomial Distribution
cbioportalRBrowse and Query Clinical and Genomic Data from cBioPortal
cblCausal Discovery under a Confounder Blanket
CBnetworkMAContrast-Based Bayesian Network Meta Analysis
CBPECorrelation-Based Penalized Estimators
CBPSCovariate Balancing Propensity Score
cbqConditional Binary Quantile Models
cbsodataRStatistics Netherlands (CBS) Open Data API Client
CBSrFits Cubic Bezier Spline Functions to Intertemporal and Risky Choice Data
CBTConfidence Bound Target Algorithm
CCControl Charts
CCACanonical Correlation Analysis
CCAMLRGISAntarctic Spatial Data Manipulation
ccaPP(Robust) Canonical Correlation Analysis via Projection Pursuit
cccdClass Cover Catch Digraphs
cccmCrossed Classification Credibility Model
cccpCone Constrained Convex Problems
cccrmConcordance Correlation Coefficient for Repeated (and Non-Repeated) Measures
ccdaCombined Cluster and Discriminant Analysis
ccdRUtilities for Interacting with the 'CTX' APIs
cchsCox Model for Case-Cohort Data with Stratified Subcohort-Selection
cchsflowTransforming and Harmonizing CCHS Variables
ccidCross-Covariance Isolate Detect: a New Change-Point Method for Estimating Dynamic Functional Connectivity
cclustConvex Clustering Methods and Clustering Indexes
CCMCorrelation Classification Method
ccmEstimatorComparative Causal Mediation Estimation
ccmlConsensus Clustering for Different Sample Coverage Data
ccmmCompositional Mediation Model
CCMMRMinimization of the Convex Clustering Loss Function
ccmReportRWraps 'CCM' with Utility Functions
ccoptimalmatchImplementation of Case-Control Optimal Matching
ccostrEstimation of Mean Costs in Censored Data
CCPSignificance Tests for Canonical Correlation Analysis (CCA)
ccpsycMethods for Cross-Cultural Psychology
ccRemoverRemoves the Cell-Cycle Effect from Single-Cell RNA-Sequencing Data
ccrsCorrect and Cluster Response Style Biased Data
ccrtmCoupled Chain Radiative Transfer Models
ccssCluster Circular Systematic Sampling
ccTensorCUR/CX Tensor Decomposition
cctoolsTools for the Continuous Convolution Trick in Nonparametric Estimation
CCTpackConsensus Analysis, Model-Based Clustering, and Cultural Consensus Theory Applications
CCWeightsPerform Weighted Linear Regression for Calibration Curve
cdCD Data for Entity Resolution
cdataFluid Data Transformations
CDatanetEconometrics of Network Data
cdcatRCognitive Diagnostic Computerized Adaptive Testing
cdcsisConditional Distance Correlation Based Feature Screening and Conditional Independence Inference
cderInterface to the California Data Exchange Center (CDEC)
cdfquantregQuantile Regression for Random Variables on the Unit Interval
CDFtDownscaling and Bias Correction via Non-Parametric CDF-Transform
cdgdCausal Decomposition of Group Disparities
CDGHMMHidden Markov Models for Multivariate Panel Data
cdleiCause-Deleted Life Expectancy Improvement Procedure
cdlToolsTools to Download and Work with USDA Cropscape Data
CDMCognitive Diagnosis Modeling
CDMConnectorConnect to an OMOP Common Data Model
cdmToolsUseful Tools for Cognitive Diagnosis Modeling
cdomR Functions to Model CDOM Spectra
cdparcoordTop Frequency-Based Parallel Coordinates
cdrcRLoad 'CDRC' Data
cdsConstrained Dual Scaling for Detecting Response Styles
CDSE'Copernicus Data Space Ecosystem' API Wrapper
CDSSCourse-Dependent Skill Structures
CDVICuddy-Della Valle Index for Capturing the Instability in Time Series Data
CDVineCopulaConditionalSampling from Conditional C- and D-Vine Copulas
ceasCellular Energetics Analysis Software
CECCross-Entropy Clustering
CEDACRISPR Screen and Gene Expression Differential Analysis
CEEMDANMLCEEMDAN Decomposition Based Hybrid Machine Learning Models
cegChain Event Graph
CEGOCombinatorial Efficient Global Optimization
celestialCollection of Common Astronomical Conversion Routines and Functions
cellKeyConsistent Perturbation of Statistical Frequency- And Magnitude Tables
cellOriginsFinds RNASeq Source Tissues Using In Situ Hybridisation Data
cellpypesCell Type Pipes for Single-Cell RNA Sequencing Data
cellrangerTranslate Spreadsheet Cell Ranges to Rows and Columns
celltrackRMotion Trajectory Analysis
cellVolumeDistFunctions to Fit Cell Volume Distributions and Thereby Estimate Cell Growth Rates and Division Times
cellWiseAnalyzing Data with Cellwise Outliers
cemCoarsened Exact Matching
cemcoFit 'CemCO' Algorithm
CenBARBroken Adaptive Ridge AFT Model with Censored Data
cencrneConsistent Estimation of the Number of Communities via Regularized Network Embedding
cenGAMCensored Regression with Smooth Terms
cenROCEstimating Time-Dependent ROC Curve and AUC for Censored Data
censableMaking Census Data More Usable
censCovLinear Regression with a Randomly Censored Covariate
CensMFMFinite Mixture of Multivariate Censored/Missing Data
censo2017Base de Datos de Facil Acceso del Censo 2017 de Chile (2017 Chilean Census Easy Access Database)
censobrDownload Data from Brazil's Population Census
censorcopulaEstimate Parameter of Bivariate Copula
censored'parsnip' Engines for Survival Models
censRegCensored Regression (Tobit) Models
CensSpatialCensored Spatial Models
Census2016Data from the Australian Census 2016
censusapiRetrieve Data from the Census APIs
censusrCollect Data from the Census API
centiserveFind Graph Centrality Indices
centrifugeRNon-Trivial Balance of Centrifuge Rotors
CEOdataDatasets of the CEO (Centre d'Estudis d'Opinio) for Opinion Polls in Catalonia
CEoptimCross-Entropy R Package for Optimization
CePaCentrality-Based Pathway Enrichment
cepiigeodistCEPII's GeoDist Datasets
ceppContext Driven Exploratory Projection Pursuit
cepRBusca CEPs Brasileiros
cepreaderRead 'CEP' and Legacy 'CANOCO' Files
cepumdCalculate Consumer Expenditure Survey (CE) Annual Estimates
cequreCensored Quantile Regression & Monotonicity-Respecting Restoring
ceramicDownload Online Imagery Tiles
cerealSerialize 'vctrs' Objects to 'JSON'
CERFITCausal Effect Random Forest of Interaction Tress
CerioliOutlierDetectionOutlier Detection Using the Iterated RMCD Method of Cerioli (2010)
CeRNASeekIdentification and Analysis of ceRNA Regulation
ceRtaintyCertainty Equivalent
Certara.NLME8Utilities for Certara's Nonlinear Mixed-Effects Modeling Engine
Certara.REasily Install Pharmacometric Packages and Shiny Applications Developed by Certara
ceserCluster Estimated Standard Errors
cesRAccess the Canadian Election Study Datasets
cetcolorCET Perceptually Uniform Colour Maps
ceterisParibusCeteris Paribus Profiles
cfaConfigural Frequency Analysis (CFA)
CFAcoopColony Formation Assay: Taking into Account Cellular Cooperation
CFCCause-Specific Framework for Competing-Risk Analysis
cfdaCategorical Functional Data Analysis
cfdecompCounterfactual Decomposition: MC Integration of the G-Formula
CFFSimple Similarity for User-Based Collaborative Filtering Systems
cffdrsCanadian Forest Fire Danger Rating System
cffrGenerate Citation File Format ('cff') Metadata for R Packages
cfidIdentification of Counterfactual Queries in Causal Models
CFiltCollaborative Filtering by Reference Classes
cfmaCausal Functional Mediation Analysis
cfmortalityCystic Fibrosis Survival Prediction Model Based on Stanojevic Model
CFOCFO-Type Designs in Phase I Clinical Trials
cforwardForward Selection using Concordance/C-Index
cfrEstimate Disease Severity and Case Ascertainment
cftClimate Futures Toolbox
CFtimeUsing CF-Compliant Calendars with Climate Projection Data
cgCompare Groups, Analytically and Graphically
cgaimConstrained Groupwise Additive Index Models
cgal4h'CGAL' Version 4 C++ Header Files
cgamConstrained Generalized Additive Model
cgAUCCalculate AUC-type measure when gold standard is continuous and the corresponding optimal linear combination of variables with respect to it
CGEComputing General Equilibrium
CGGPComposite Grid Gaussian Processes
cglassoConditional Graphical LASSO for Gaussian Graphical Models with Censored and Missing Values
cglmFits Conditional Generalized Linear Models
cgmanalysisClean and Analyze Continuous Glucose Monitor Data
CGManalyzerContinuous Glucose Monitoring Data Analyzer
cgmquantifyAnalyzing Glucose and Glucose Variability
CGNMCluster Gauss-Newton Method
CGPComposite Gaussian Process Models
CGPfunctionsPowell Miscellaneous Functions for Teaching and Learning Statistics
CGRCompound Growth Rate for Capturing the Growth Rate Over the Period
cgwtoolsMiscellaneous Tools
chAbout some Small Functions
chainbinomialChain Binomial Models for Analysis of Infectious Disease Data
ChainLadderStatistical Methods and Models for Claims Reserving in General Insurance
chameleonAutomatic Colors for Multi-Dimensional Data
chandwichChandler-Bate Sandwich Loglikelihood Adjustment
changepointMethods for Changepoint Detection
changepoint.geoGeometrically Inspired Multivariate Changepoint Detection
changepoint.influencePackage to Calculate the Influence of the Data on a Changepoint Segmentation
changepoint.npMethods for Nonparametric Changepoint Detection
changepointsA Collection of Change-Point Detection Methods
changepointsVarChange-Points Detections for Changes in Variance
ChangePointTaylorIdentify Changes in Mean
ChangepointTestingChange Point Estimation for Clustered Signals
changepointTestsChange Point Tests for Joint Distributions and Copulas
changerChange R Package Name
changeRangeRChange Metrics for Species Geographic Ranges
changeSS-Curve Fit for Changepoint Analysis
ChannelAttributionMarkov Model for Online Multi-Channel Attribution
ChannelAttributionAppShiny Web Application for the Multichannel Attribution Problem
chantricsLoglikelihood Adjustments for Econometric Models
Chaos010-1 Test for Chaos
ChaosGameChaos Game
charlatanMake Fake Data
charlesschwabapiWrapper Functions Around 'Charles Schwab Individual Trader API'
chartqlSimplified Language for Plots and Charts
chatAI4RChat-Based Interactive Artificial Intelligence for R
chatgptInterface to 'ChatGPT' from R
chattrInteract with Large Language Models in 'RStudio'
cheaprSimple Functions to Save Time and Memory
cheatsheetDownload R Cheat Sheets Locally
checkargCheck the Basic Validity of a (Function) Argument
CheckDigitCalculate and Verify Check Digits
checkdownCheck-Fields and Check-Boxes for 'rmarkdown'
checkedSystematically Run R CMD Checks
checkerChecks 'R' Configuration Set Up Correctly Before Class
checkglobalsStatic Analysis of R-Code Dependencies
checkhelperDeal with Check Outputs
checkLuhnChecks if a Number is Valid Using the Luhn Algorithm
checkmateFast and Versatile Argument Checks
checkpointInstall Packages from Snapshots on the Checkpoint Server for Reproducibility
checkthatIntuitive Unit Testing Tools for Data Manipulation
cheddarAnalysis and Visualisation of Ecological Communities
cheemInteractively Explore Local Explanations with the Radial Tour
cheeseTools for Working with Data During Statistical Analysis
chem.databasesCollection of 3 Chemical Databases from Public Sources
chem16SChemical Metrics for Microbial Communities
chemCalCalibration Functions for Analytical Chemistry
chemdegAnalysis of Chemical Degradation Kinetic Data
CHEMISTCausal Inference with High-Dimensional Error-Prone Covariates and Misclassified Treatments
chemodivAnalysing Chemodiversity of Phytochemical Data
chemometricsMultivariate Statistical Analysis in Chemometrics
ChemoSpecExploratory Chemometrics for Spectroscopy
ChemoSpec2DExploratory Chemometrics for 2D Spectroscopy
ChemoSpecUtilsFunctions Supporting Packages ChemoSpec and ChemoSpec2D
ChernoffDistChernoff's Distribution
cherryMultiple Testing Methods for Exploratory Research
cherryblossomCherry Blossom Run Race Results
chessRead, Write, Create and Explore Chess Games
chessboardCreate Network Connections Based on Chess Moves
chestChange-in-Estimate Approach to Assess Confounding Effects
chevronStandard TLGs for Clinical Trials Reporting
CHFFClosest History Flow Field Forecasting for Bivariate Time Series
chiThe Chi Distribution
chicaneCapture Hi-C Analysis Engine
childdevdataChild Development Data
childesrAccessing the 'CHILDES' Database
childfreeAccess and Harmonize Childfree Demographic Data
childsdsData and Methods Around Reference Values in Pediatrics
chilemapasMapas de las Divisiones Politicas y Administrativas de Chile (Maps of the Political and Administrative Divisions of Chile)
ChillModelsProcessing Chill and Heat Models for Temperate Fruit Trees
chillRStatistical Methods for Phenology Analysis in Temperate Fruit Trees
chinese.miscMiscellaneous Tools for Chinese Text Mining and More
ChineseNamesChinese Name Database 1930-2008
chipPCRToolkit of Helper Functions to Pre-Process Amplification Data
chirpsAPI Client for CHIRPS and CHIRTS
chisq.posthoc.testA Post Hoc Analysis for Pearson's Chi-Squared Test for Count Data
chisquareChi-Square and G-Square Test of Independence, Power and Residual Analysis, Measures of Categorical Association
chkCheck User-Supplied Function Arguments
chkptstanrCheckpoint MCMC Sampling with 'Stan'
chlorpromazineRConvert Antipsychotic Doses to Chlorpromazine Equivalents
CHMMCoupled Hidden Markov Models
CHNCapitalStockCompute Chinese Capital Stocks
chngptEstimation and Hypothesis Testing for Threshold Regression
CHNOSZThermodynamic Calculations and Diagrams for Geochemistry
choiceDesDesign Functions for Choice Studies
ChoiceModelRChoice Modeling in R
CHOIRBMPlots the CHOIR Body Map
choleraAmend, Augment and Aid Analysis of John Snow's Cholera Map
CholWishartCholesky Decomposition of the Wishart Distribution
choosepcChoose the Number of Principal Components via Recistruction Error
choplumpPermutation Test for Some Positive and Many Zero Responses
chopthinThe Chopthin Resampler
ChoRChordalysis R Package
chordsEstimation in Respondent Driven Samples
choroplethrSimplify the Creation of Choropleth Maps in R
choroplethrAdmin1Contains an Administrative-Level-1 Map of the World
choroplethrMapsContains Maps Used by the 'choroplethr' Package
choucaA Stochastic Cellular Automaton Engine
christmasGeneration of Different Animated Christmas Cards
chromConverterChromatographic File Converter
chromerInterface to Chromosome Counts Database API
chromoMapInteractive Genomic Visualization of Biological Data
chromoteHeadless Chrome Web Browser Interface
chromseqSplit Chromosome 'Fasta' File
chronChronological Objects which Can Handle Dates and Times
chronicleGrammar for Creating R Markdown Reports
chroniclerAdd Logging to Functions
chronochrtCreating Chronological Charts
chronosphereEvolving Earth System Variables
chunkedChunkwise Text-File Processing for 'dplyr'
chunkhooksChunk Hooks for 'R Markdown'
chunkRRead Tables in Chunks
chyperFunctions for Conditional Hypergeometric Distributions
CIAAWconsensusIsotope Ratio Meta-Analysis
CIARACluster Independent Algorithm for Rare Cell Types Identification
CICAClusterwise Independent Component Analysis
ciCalibrateCalibration of Confidence Intervals to Support Intervals
ciccrCausal Inference in Case-Control and Case-Population Studies
ciceroneProvide Tours of 'Shiny' Applications
CICICausal Inference with Continuous (Multiple Time Point) Interventions
CIEEEstimating and Testing Direct Effects in Directed Acyclic Graphs using Estimating Equations
cifCointegrated ICU Forecasting
CIfinderEstimate the Confidence Intervals for Predictive Values
ciftiToolbox for Connectivity Informatics Technology Initiative ('CIFTI') Files
ciftiToolsTools for Reading, Writing, Viewing and Manipulating CIFTI Files
CIMCompositional Impact of Migration
cimirInterface to the CIMIS Web API
CIMTxCausal Inference for Multiple Treatments with a Binary Outcome
cinaRA Computational Pipeline for Bulk 'ATAC-Seq' Profiles
cinaRgenesetsReady-to-Use Curated Gene Sets for 'cinaR'
CINEClassification International Normalized of Education
CINIDCurculionidae INstar IDentification
CINmetricsCalculate Chromosomal Instability Metrics
CINNADeciphering Central Informative Nodes in Network Analysis
cinterpolateInterpolation From C
CIPermComputationally-Efficient Confidence Intervals for Mean Shift from Permutation Methods
cipheREncryption and Decryption with Text Ciphers
CIplotFunctions to Plot Confidence Interval
cirCentered Isotonic Regression and Dose-Response Utilities
circacompareAnalyses of Circadian Data
CirceRConstruct Cohort Inclusion and Restriction Criteria Expressions
circhelpCircular Analyses Helper Functions
circleR Client Package for Circle CI
CirclesIntersectionsAlgorithm for Computation of the Intersection Areas of N Circles
circlesplotVisualize Proportions with Circles in a Plot
circletyperCurve Text Elements in 'Shiny' Using 'CircleType.js'
circlizeCircular Visualization
CircMLEMaximum Likelihood Analysis of Circular Data
CircNNTSRStatistical Analysis of Circular Data using Nonnegative Trigonometric Sums (NNTS) Models
CircNNTSRmultMultivariate Circular Data using MNNTS Models
CircOutlierDetection of Outliers in Circular-Circular Regression
CircSpaceTimeSpatial and Spatio-Temporal Bayesian Model for Circular Data
CircStatsCircular Statistics, from "Topics in Circular Statistics" (2001)
circularCircular Statistics
CircularDDMCircular Drift-Diffusion Model
circularEVExtreme Value Analysis for Circular Data
CircularSilhouetteFast Silhouette on Circular or Linear Data Clusters
circumplexAnalysis and Visualization of Circular Data
cIRTChoice Item Response Theory
CIS.DGLMCovariates, Interaction, and Selection for DGLM
citCausal Inference Test
CITANCITation ANalysis Toolpack
citationSoftware Citation Tools
citationchaserPerform Forward and Backwards Chasing in Evidence Syntheses
citecorpClient for the Open Citations Corpus
citiesClinical Trials with Intercurrent Events Simulator
CITMICEstimation of Cell Infiltration Based on Cell Crosstalk
citmreColombian Index Tool Market Rate Exchange
citoBuilding and Training Neural Networks
ciToolsConfidence or Prediction Intervals, Quantiles, and Probabilities for Statistical Models
citrusCustomer Intelligence Tool for Rapid Understandable Segmentation
ciuContextual Importance and Utility
ciuupiConfidence Intervals Utilizing Uncertain Prior Information
ciuupi2Kabaila and Giri (2009) Confidence Interval
civCategorical Instrumental Variables
civisR Client for the 'Civis Platform API'
ciwWatch the CRAN Incoming Directories
CJAMPCopula-Based Joint Analysis of Multiple Phenotypes
cjarR Client for 'Customer Journey Analytics' ('CJA') API
cjbartHeterogeneous Effects Analysis of Conjoint Experiments
CJIVECanonical Joint and Individual Variation Explained (CJIVE)
cjointAMCE Estimator for Conjoint Experiments
ckanrClient for the Comprehensive Knowledge Archive Network ('CKAN') API
CKATComposite Kernel Association Test for Pharmacogenetics Studies
CKLRTComposite Kernel Machine Regression Based on Likelihood Ratio Test
Ckmeans.1d.dpOptimal, Fast, and Reproducible Univariate Clustering
CKMRpopForward-in-Time Simulation and Tallying of Pairwise Relationships
CLACritical Line Algorithm in Pure R
CladdisMeasuring Morphological Diversity and Evolutionary Tempo
cladoRcppC++ Implementations of Phylogenetic Cladogenesis Calculations
ClaimsProblemsAnalysis of Conflicting Claims
clamClassical Age-Depth Modelling of Cores from Deposits
ClamRTime Series Modeling for Climate Change Proxies
clapDetecting Class Overlapping Regions in Multidimensional Data
clarabelInterior Point Conic Optimization Solver
clarifaiAccess to Clarifai API
clarifySimulation-Based Inference for Regression Models
clarkeTestDistribution-Free Tests of Non-Nested Models
classFunctions for Classification
ClassComparisonClasses and Methods for "Class Comparison" Problems on Microarrays
ClassDiscoveryClasses and Methods for "Class Discovery" with Microarrays or Proteomics
classGraphConstruct Graphs of S4 Class Hierarchies
classifierplotsGenerates a Visualization of Classifier Performance as a Grid of Diagnostic Plots
classiflyExplore Classification Models in High Dimensions
classIntChoose Univariate Class Intervals
classmapVisualizing Classification Results
CLASTExact Confidence Limits after a Sequential Trial
cld2Google's Compact Language Detector 2
cld3Google's Compact Language Detector 3
cldaConvolution-Based Linear Discriminant Analysis
cleanFast and Easy Data Cleaning
CleanBSequencesCuring of Biological Sequences
cleancallC Resource Cleanup via Exit Handlers
cleandataTo Inspect and Manipulate Data; and to Keep Track of This Process
cleanepiClean and Standardize Epidemiological Data
cleanerFast and Easy Data Cleaning
cleangeoCleaning Geometries from Spatial Objects
CleaningValidationCleaning Validation Functions for Pharmaceutical Cleaning Process
cleanNLPA Tidy Data Model for Natural Language Processing
cleanrHelps You to Code Cleaner
cleanrmdClean Class-Less 'R Markdown' HTML Documents
cleanTSTestbench for Univariate Time Series Cleaning
cleaRClean the R Console and Environment
clesprComposite Likelihood Estimation for Spatial Data
clevrClustering and Link Prediction Evaluation in R
clhsConditioned Latin Hypercube Sampling
cliHelpers for Developing Command Line Interfaces
cliappCreate Rich Command Line Applications
clickableImageMapImplement 'tableGrob' Object as a Clickable Image Map
clickbWeb Data Analysis by Bayesian Mixture of Markov Models
ClickClustModel-Based Clustering of Categorical Sequences
ClickClustContMixtures of Continuous Time Markov Models
ClickHouseHTTPA Simple HTTP Database Interface to 'ClickHouse'
clickRSemi-Automatic Preprocessing of Messy Data with Change Tracking for Dataset Cleaning
clickstreamAnalyzes Clickstreams Based on Markov Chains
clidamongerMonthly Climate Data for Germany, Usable for Heating and Cooling Calculations
clidatajpData from Japan Meteorological Agency
cliffExecute Command Line Programs Interactively
cliffordArbitrary Dimensional Clifford Algebras
clifroEasily Download and Visualise Climate Data from CliFlo
CliftLRDComplex-Valued Wavelet Lifting Estimators of the Hurst Exponent for Irregularly Sampled Time Series
clikcorrCensoring Data and Likelihood-Based Correlation Estimation
climaemetClimate AEMET Tools
climateStabilityEstimating Climate Stability from Climate Model Data
climatolClimate Tools (Series Homogenization and Derived Products)
climatrendsClimate Variability Indices for Ecological Modelling
ClimClassClimate Classification According to Several Indices
CLimdGenerating Rainfall Rasters from IMD NetCDF Data
climeConstrained L1-Minimization for Inverse (Covariance) Matrix Estimation
climetricsClimate Change Metrics
climextRemesTools for Analyzing Climate Extremes
ClimIndClimate Indices
ClimMobToolsAPI Client for the 'ClimMob' Platform
ClimProjDiagsSet of Tools to Compute Various Climate Indices
climwinClimate Window Analysis
clinDataReviewClinical Data Review Tool
clinDRSimulation and Analysis Tools for Clinical Dose Response Modeling
clinfunClinical Trial Design and Data Analysis Functions
clinicalomicsdbRInterface with the 'ClinicalOmicsDB' API, Allowing for Easy Data Downloading and Importing
clinicalsignificanceA Toolbox for Clinical Significance Analyses in Intervention Studies
ClinicalTrialSummarySummary Measures for Clinical Trials with Survival Outcomes
ClinicalUtilityRecalRecalibration Methods for Improved Clinical Utility of Risk Scores
clinmonHemodynamic Calculations from Clinical Monitoring
clinPKClinical Pharmacokinetics Toolkit
clinsigClinical Significance Functions
ClinSigMeasuresClinical Significance Measures
clinspacyClinical Natural Language Processing using 'spaCy', 'scispaCy', and 'medspaCy'
clintoolsTools for Clinical Research
clinUtilsGeneral Utility Functions for Analysis of Clinical Data
cliotClinical Indices and Outcomes Tools
clippCalculating Likelihoods by Pedigree Paring
cliprRead and Write from the System Clipboard
CliquePercolationClique Percolation for Networks
clisymbolsUnicode Symbols at the R Prompt
CLMEConstrained Inference for Linear Mixed Effects Models
clmplusTool-Box of Chain Ladder Plus Models
clockDate-Time Types and Tools
clockifyA Wrapper for the 'Clockify' API
clogitboostBoosting Conditional Logit Model
clogitL1Fitting Exact Conditional Logistic Regression with Lasso and Elastic Net Penalties
clogitLassoSparse Conditional Logistic Regression for Matched Studies
cloneRateEstimate Growth Rates from Phylogenetic Trees
CloneSeekerSeeking and Finding Clones in Copy Number and Sequencing Data
CLONETv2Clonality Estimates in Tumor
clordrComposite Likelihood Inference and Diagnostics for Replicated Spatial Ordinal Data
closeloopIntegrate Single-Arm Observational Data in Network Meta Analysis
cloudfsStreamlined Interface to Interact with Cloud Storage Platforms
cloudmlInterface to the Google Cloud Machine Learning Platform
cloudosR Client Library for CloudOS
cloudstoRSimplifies Access to Cloudstor API
cloudUtilCloud Utilization Plots
clptheoryCompute Price of Production and Labor Values
clrCurve Linear Regression via Dimension Reduction
clrngParallel Random Number Generation on GPU
CLSIEP15Clinical and Laboratory Standards Institute (CLSI) EP15-A3 Calculations
clttoolsCentral Limit Theorem Experiments (Theoretical and Simulation)
clubproClassification Using Binary Procrustes Rotation
clubSandwichCluster-Robust (Sandwich) Variance Estimators with Small-Sample Corrections
clueCluster Ensembles
ClueRCluster Evaluation
clugenrMultidimensional Cluster Generation Using Support Lines
CluMPClustering of Micro Panel Data
ClusBootBootstrap a Clustering Solution to Establish the Stability of the Clusters
cluscovClustered Covariate Regression
clusEvolA Procedure for Cluster Evolution Analytics
ClusPredSimultaneous Semi-Parametric Estimation of Clustering and Regression
clusrankWilcoxon Rank Tests for Clustered Data
ClusROCROC Analysis in Three-Class Classification Problems for Clustered Data
ClussClusterSimultaneous Detection of Clusters and Cluster-Specific Genes in High-Throughput Transcriptome Data
clust.bin.pairStatistical Methods for Analyzing Clustered Matched Pair Data
clustAnalyticsCluster Evaluation on Graphs
ClustAssessTools for Assessing Clustering
ClustBlockClustering of Datasets
ClusTCR2Identifying Similar T Cell Receptor Hyper-Variable Sequences with 'ClusTCR2'
clustEffClusters of Effects Curves in Quantile Regression Models
cluster"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.
cluster.datasetsCluster Analysis Data Sets
Cluster.OBeuCluster Analysis 'OpenBudgets.eu'
clusterabilityPerforms Tests for Cluster Tendency of a Data Set
ClusterBootstrapAnalyze Clustered Data with Generalized Linear Models using the Cluster Bootstrap
clusterConsConsensus Clustering using Multiple Algorithms and Parameters
clusterCritClustering Indices
clusteredinterferenceCausal Effects from Observational Studies with Clustered Interference
ClusteredMutationsLocation and Visualization of Clustered Somatic Mutations
clusterGenerationRandom Cluster Generation (with Specified Degree of Separation)
clusterhapClustering Genotypes in Haplotypes
clusterHDTools for Clustering High-Dimensional Data
ClusteringTechniques for Evaluating Clustering
clustering.sc.dpOptimal Distance-Based Clustering for Multidimensional Data with Sequential Constraint
clusterMICluster Analysis with Missing Values by Multiple Imputation
clustermoleUnbiased Single-Cell Transcriptomic Data Cell Type Identification
clustermqEvaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM, PBS/Torque)
clusternomicsIntegrative Clustering for Heterogeneous Biomedical Datasets
ClusterRGaussian Mixture Models, K-Means, Mini-Batch-Kmeans, K-Medoids and Affinity Propagation Clustering
ClusterRankTestRank Tests for Clustered Data
clusterReproReproducibility of Gene Expression Clusters
clusterSEsCalculate Cluster-Robust p-Values and Confidence Intervals
clusterSimSearching for Optimal Clustering Procedure for a Data Set
ClusterStabilityAssessment of Stability of Individual Objects or Clusters in Partitioning Solutions
clustertendCheck the Clustering Tendency
ClusterVARFitting Latent Class Vector-Autoregressive (VAR) Models
ClustGeoHierarchical Clustering with Spatial Constraints
ClustImputeK-Means Clustering with Build-in Missing Data Imputation
clustlearnLearn Clustering Techniques Through Examples and Code
clustMDModel Based Clustering for Mixed Data
clustMixTypek-Prototypes Clustering for Mixed Variable-Type Data
clustNetNetwork-Based Clustering
ClustOfVarClustering of Variables
ClusTorusPrediction and Clustering on the Torus by Conformal Prediction
clustraClustering Longitudinal Trajectories
clusTransitionMonitor Changes in Cluster Solutions of Dynamic Datasets
clustrdMethods for Joint Dimension Reduction and Clustering
clustreeVisualise Clusterings at Different Resolutions
clustringrCluster Strings by Edit-Distance
CLUSTShinyInteractive Document for Working with Cluster Analysis
ClustVarLVClustering of Variables Around Latent Variables
clustvarselVariable Selection for Gaussian Model-Based Clustering
ClusVisGaussian-Based Visualization of Gaussian and Non-Gaussian Model-Based Clustering
clvCluster Validation Techniques
clValidValidation of Clustering Results
CLVToolsTools for Customer Lifetime Value Estimation
cmaesCovariance Matrix Adapting Evolutionary Strategy
cmaesrCovariance Matrix Adaptation Evolution Strategy
cmahalanobisCalculate Distance Measures for a Given List of Data Frames with Factors
CMAPSSCommercial Modular Aero-Propulsion System Simulation Data Set
CMapVizRepresentation Tool For Output Of Connectivity Map (CMap) Analysis
cmaRsImplementation of the Conic Multivariate Adaptive Regression Splines in R
cmbClustConditional Mixture Modeling and Model-Based Clustering
cmceComputer Model Calibration for Deterministic and Stochastic Simulators
cmcRAn Implementation of the 'Congruent Matching Cells' Method
cmdfunFramework for Building Interfaces to Shell Commands
cmenetBi-Level Selection of Conditional Main Effects
CMFCollective Matrix Factorization
cmfrecCollective Matrix Factorization for Recommender Systems
CMFsurrogateCalibrated Model Fusion Approach to Combine Surrogate Markers
CMGFMCovariate-Augumented Generalized Factor Model
cmhcAccess, Retrieve, and Work with CMHC Data
CMHNPACochran-Mantel-Haenszel and Nonparametric ANOVA
cmlConditional Manifold Learning
CMLSConstrained Multivariate Least Squares
cmmCategorical Marginal Models
cmmrCEU Mass Mediator RESTful API
CMMsCompositional Mediation Model
cmnaComputational Methods for Numerical Analysis
cmoceanBeautiful Colour Maps for Oceanography
CMplotCircle Manhattan Plot
cmprskSubdistribution Analysis of Competing Risks
cmprskcoxmsmUse IPW to Estimate Treatment Effect under Competing Risks
cmprskQRAnalysis of Competing Risks Using Quantile Regressions
cmpsRR Implementation of Congruent Matching Profile Segments Method
cmRAnalysis of Cardiac Magnetic Resonance Images
cmrutilsMisc Functions of the Center for Mathematical Research
cmsCalculate Medicare Reimbursement
cmsafA Toolbox for CM SAF NetCDF Data
cmsafopsTools for CM SAF NetCDF Data
cmsafvisTools to Visualize CM SAF NetCDF Data
CMShinyInteractive Document for Working with Confusion Matrix
cmstatrStatistical Methods for Composite Material Data
cmstatrExtMore Statistical Methods for Composite Material Data
cmtestConditional Moments Test
cmvnormThe Complex Multivariate Gaussian Distribution
cnaCausal Modeling with Coincidence Analysis
CNAIMCommon Network Asset Indices Methodology (CNAIM)
cnaOptOptimizing Consistency and Coverage in Configurational Causal Modeling
cnbdistrConditional Negative Binomial Distribution
cncaGUICanonical Non-Symmetrical Correspondence Analysis in R
CNIDGet Basic Information from Chinese ID Number
CNLTregComplex-Valued Wavelet Lifting for Signal Denoising
CNLTtsaComplex-Valued Wavelet Lifting for Univariate and Bivariate Time Series Analysis
cnmapChina Map Data from AutoNavi Map
cNORMContinuous Norming
CNprepPre-Process DNA Copy Number (CN) Data for Detection of CN Events
CNPSNonparametric Statistics
cnumChinese Numerals Processing
CNVRGDirichlet Multinomial Modeling of Relative Abundance Data
CNVScopeA Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization
coalaA Framework for Coalescent Simulation
coalescentMCMCMCMC Algorithms for the Coalescent
COAPHigh-Dimensional Covariate-Augmented Overdispersed Poisson Factor Model
coarseDataToolsAnalysis of Coarsely Observed Data
CoastlineFDCalculation of the Fractal Dimension of a Coastline
coatConditional Method Agreement Trees (COAT)
cobaltCovariate Balance Tables and Plots
cobiclustBiclustering via Latent Block Model Adapted to Overdispersed Count Data
cobsConstrained B-Splines (Sparse Matrix Based)
cocaCluster-of-Clusters Analysis
cocktailApp'shiny' App to Discover Cocktails
CoClustCopula Based Cluster Analysis
coconotsConvolution-Closed Models for Count Time Series
COCONUTCOmbat CO-Normalization Using conTrols (COCONUT)
cocorComparing Correlations
cocorrespCo-Correspondence Analysis Methods
cocosoRCoCoSo - Combined Compromise Solution Method for MCDA
cocotestDependence Condition Test Using Ranked Correlation Coefficients
cocronStatistical Comparisons of Two or more Alpha Coefficients
codaOutput Analysis and Diagnostics for MCMC
coda.baseA Basic Set of Functions for Compositional Data Analysis
coda4microbiomeCompositional Data Analysis for Microbiome Studies
codacoreLearning Sparse Log-Ratios for Compositional Data
CoDaImpactInterpreting CoDa Regression Models
codalmTransformation-Free Linear Regression for Compositional Outcomes and Predictors
codaredistlmCompositional Data Linear Models with Composition Redistribution
CodataGSGenomic Prediction Using SNP Codata
cOdeAutomated C Code Generation for 'deSolve', 'bvpSolve'
codebookAutomatic Codebooks from Metadata Encoded in Dataset Attributes
codebookrCreate Codebooks from Data Frames
codebreakerRetro Logic Game
codeCollectionCollection of Codes with Labels
codecountRCounting Codes in a Text and Preparing Data for Analysis
CodeDependsAnalysis of R Code for Reproducible Research and Code Comprehension
CodelistGeneratorIdentify Relevant Clinical Codes and Evaluate Their Use
codemetaA Smaller 'codemetar' Package
codemetarGenerate 'CodeMeta' Metadata for R Packages
codenameGeneration of Code Names for Organizations, People, Projects, and Whatever Else
codepMultiscale Codependence Analysis
coderDeterministic Categorization of Items Based on External Code Data
codetoolsCode Analysis Tools for R
codewhereFind the Location of an R Package's Code
codexcopdThe CODEX (Comorbidity, Obstruction, Dyspnea, and Previous Severe Exacerbations) Index: Short and Medium-Term Prognosis in Patients Hospitalized for Chronic Obstructive Pulmonary Disease (COPD) Exacerbations
codezSeq2Seq Encoder-Decoder Model for Time-Feature Analysis Based on Tensorflow
codifiedProduce Standard/Formalized Demographics Tables
CoDiNACo-Expression Differential Network Analysis
codingMatricesAlternative Factor Coding Matrices for Linear Model Formulae
codynCommunity Dynamics Metrics
coefaMeta Analysis of Factor Analysis Based on CO-Occurrence Matrices
coefficientalphaRobust Coefficient Alpha and Omega with Missing and Non-Normal Data
coefplotPlots Coefficients from Fitted Models
coenoclinerCoenocline Simulation
coenoflexGradient-Based Coenospace Vegetation Simulator
cofadContrast Analyses for Factorial Designs
cofeatureRGenerate Cofeature Matrices
coffeeChronological Ordering for Fossils and Environmental Events
cofidCopepod Fish Interaction Database
CoFRAComplete Functional Regulation Analysis
cogaConvolution of Gamma Distributions
coglassoCollaborative Graphical Lasso - Multi-Omics Network Reconstruction
cogmaprCognitive Mapping Tools Based on Coding of Textual Sources
cognitoRAuthentication for 'Shiny' Apps with 'Amazon Cognito'
CohensdpLibraryCohen's D_p Computation with Confidence Intervals
CohortAlgebraUse of Interval Algebra to Create New Cohort(s) from Existing Cohorts
cohortBuilderData Source Agnostic Filtering Tools
CohortCharacteristicsSummarise and Visualise Characteristics of Patients in the OMOP CDM
CohortConstructorBuild and Manipulate Study Cohorts Using a Common Data Model
CohortExplorerExplorer of Profiles of Patients in a Cohort
CohortPlatSimulation of Cohort Platform Trials for Combination Treatments
cohortsCohort Analysis Made Easy
CohortSurvivalEstimate Survival from Common Data Model Cohorts
CohortSymmetrySequence Symmetry Analysis Using the Observational Medical Outcomes Partnership Common Data Model
cohorttoolsCohort Data Analyses
coilContextualization and Evaluation of COI-5P Barcode Data
CoImpParametric and Non-Parametric Copula-Based Imputation Methods
coinConditional Inference Procedures in a Permutation Test Framework
coinmarketcaprGet 'Cryptocurrencies' Market Cap Prices from Coin Market Cap
CoinprofileCoincident Profile
COINrComposite Indicator Construction and Analysis
cointmonitoRConsistent Monitoring of Stationarity and Cointegrating Relationships
cointRegParameter Estimation and Inference in a Cointegrating Regression
coldCount Longitudinal Data
colfConstrained Optimization on Linear Function
collapseAdvanced and Fast Data Transformation
CollapseLevelsCollapses Levels, Computes Information Value and WoE
collapsibleTreeInteractive Collapsible Tree Diagrams using 'D3.js'
collateralQuickly Evaluate Captured Side Effects
collatzFunctions Related to the Collatz/Syracuse/3n+1 Problem
collectionsHigh Performance Container Data Types
collidrCheck for Namespace Collisions Across Packages and Functions on CRAN
collinVisualization the Effects of Collinearity in Distributed Lag Models and Other Linear Models
collinearSeamless Multicollinearity Management
CollocInferCollocation Inference for Dynamic Systems
collpcmCollapsed Latent Position Cluster Model for Social Networks
collUtilsAuxiliary Package for Package 'CollapsABEL'
colmozzieDengue Cases and Climate Variables in Colombo Sri Lanka
colocColocalisation Tests of Two Genetic Traits
colocalizationNormalized Spatial Intensity Correlation
colocalizedClusters of Colocalized Sequences
colocPropTestProportional Testing for Colocalisation Analysis
colocrConduct Co-Localization Analysis of Fluorescence Microscopy Images
colorblindcheckCheck Color Palettes for Problems with Color Vision Deficiency
colorBlindnessSafe Color Set for Color Blindness
colorDFColorful Data Frames in R Terminal
colordistanceDistance Metrics for Image Color Similarity
colorednoiseSimulate Temporally Autocorrelated Populations
colorfindrExtract Colors from Windows BMP, JPEG, PNG, TIFF, and SVG Format Images
colorhcplotColorful Hierarchical Clustering Dendrograms
coloristColoring Wildlife Distributions in Space-Time
colorizerColorize Old Images Using the 'DeOldify' Image Colorization API
colormapColor Palettes using Colormaps Node Module
ColorNameRGive Colors a Name
colorpatchOptimized Rendering of Fold Changes and Confidence Values
colorplaneBasic S4 Classes and Methods for Mapping Between Numeric Values and Colors
colorrColor Palettes for EPL, MLB, NBA, NHL, and NFL Teams
colorRamp2Generate Color Mapping Functions
colorRampsBuilds Color Tables
colors3dGenerate 2D and 3D Color Palettes
colorscienceColor Science Methods and Data
colorsGenGeneration of Random Colors
colorspaceA Toolbox for Manipulating and Assessing Colors and Palettes
colorSpecColor Calculations with Emphasis on Spectral Data
Colossus"Risk Model Regression and Analysis with Complex Non-Linear Models"
colouRCreate Colour Palettes from Images
colourloversR Client for the COLOURlovers API
colourpickerA Colour Picker Tool for Shiny and for Selecting Colours in Plots
colourvaluesAssigns Colours to Values
colourvisionColour Vision Models
COLPCausal Discovery for Categorical Data with Label Permutation
colsConstrained Ordinary Least Squares
cols4allColors for all
coltCommand-Line Color Themes
comatCreates Co-Occurrence Matrices of Spatial Data
comatoAnalysis of Concept Maps and Concept Landscapes
COMBATA Combined Association Test for Genes using Summary Statistics
combat.enigmaFit and Apply ComBat Harmonization for ENIGMA
combinatcombinatorics utilities
combinationpvaluesCombination of Independent P-Values
combinatoricsIntroduction to Some Combinatorial Relations
combinedeventsCalculate Scores and Marks for Track and Field Combined Events
CombinePortfolioEstimation of Optimal Portfolio Weights by Combining Simple Portfolio Strategies
combinITA Combined Interaction Test for Unreplicated Two-Way Tables
CombinSConstruction Methods of some Series of PBIB Designs
combirocSelection and Ranking of Omics Biomarkers Combinations Made Easy
combiterCombinatorics Iterators
COMBOCorrecting Misclassified Binary Outcomes in Association Studies
comclimCommunity Climate Statistics
cometExactTestExact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm
cometr'Comet' API for R
cometsCovariance Measure Tests for Conditional Independence
comfModels and Equations for Human Comfort Research
comFuncsCommonly Used Functions for R Shiny Applications
ComICSComputational Methods for Immune Cell-Type Subsets
CoMiReConvex Mixture Regression
COMIXCoarsened Mixtures of Hierarchical Skew Kernels
commafreeCall Functions Without Commas Between Arguments
CommEcolCommunity Ecology Analyses
CommKernNetwork-Based Communities and Kernel Machine Methods
commonSolutions for Common Problems in Base R
CommonDataModelOMOP CDM DDL and Documentation Generator
CommonJavaJarsUseful Libraries for Building a Java Based GUI under R
commonmarkHigh Performance CommonMark and Github Markdown Rendering in R
CommonMean.CopulaCommon Mean Vector under Copula Models
commonsMathJAR Files of the Apache Commons Mathematics Library
communicationFeature Extraction and Model Estimation for Audio of Human Speech
comorbidityComputing Comorbidity Scores
comorbidPGSAssessing Predisposition Between Phenotypes using Polygenic Scores
comorosmapsComoro Islands Maps
Comp2ROCCompare Two ROC Curves that Intersect
comparatorComparison Functions for Clustering and Record Linkage
compareComparing Objects for Differences
compareCCompare Two Correlated C Indices with Right-Censored Survival Outcome
CompareCausalNetworksInterface to Diverse Estimation Methods of Causal Networks
CompAREdesignStatistical Functions for the Design of Studies with Composite Endpoints
compareDFDo a Git Style Diff of the Rows Between Two Dataframes with Similar Structure
compareGroupsDescriptive Analysis by Groups
compareMCMCsCompare MCMC Efficiency from 'nimble' and/or Other MCMC Engines
CompareMultipleModelsFinding the Best Model Using Eight Metrics Values
comparerCompare Output and Run Time
CompareTestsCorrect for Verification Bias in Diagnostic Accuracy & Agreement
comparisonMultivariate Likelihood Ratio Calculation and Evaluation
ComparisonSurvComparison of Survival Curves Between Two Groups
compasConformational Manipulations of Protein Atomic Structures
CompDistMultisection Composite Distributions
comperankRanking Methods for Competition Results
comperesManage Competition Results
competitiontoolboxA Graphical User Interface for Antitrust and Trade Practitioners
CompExpDesComputer Experiment Designs
CompGRComplete Annual Growth Rate Generator
compHclustComplementary Hierarchical Clustering
CompindComposite Indicators Functions
compindexRCalculates Composite Index
compindPCAComputation of Relative Weights of Variables and Composite Index Values Based on PCA
completejourneyRetail Shopping Data
complexTime Series Analysis and Forecasting Using Complex Variables
complexityCalculate the Proportion of Permutations in Line with an Informative Hypothesis
complexlmLinear Fitting for Complex Valued Data
complexNetComplex Network Generation
complexplusFunctions of Complex or Real Variable
ComplexUpsetCreate Complex UpSet Plots Using 'ggplot2' Components
complmrobRobust Linear Regression with Compositional Data as Covariates
CompMixA Comprehensive Toolkit for Environmental Mixtures Analysis ('CompMix')
CompModelsPseudo Computer Models for Optimization
COMPoissonRegConway-Maxwell Poisson (COM-Poisson) Regression
CompositeReliabilityDetermine the Composite Reliability of a Naturalistic, Unbalanced Dataset
CompositionalCompositional Data Analysis
CompositionalMLMachine Learning with Compositional Data
compositionsCompositional Data Analysis
compound.CoxUnivariate Feature Selection and Compound Covariate for Predicting Survival
CompoundEventsStatistical Modeling of Compound Events
CompParetoDiscrete Composite Distributions with Pareto Tails
CompQuadFormDistribution Function of Quadratic Forms in Normal Variables
CompRPaired Comparison Data Analysis
comprehenrList Comprehensions
compute.esCompute Effect Sizes
ComRiskModelFitting of Complementary Risk Models
comsimitvFlexible Framework for Simulating Community Assembly
comstabPartitioning the Drivers of Stability of Ecological Communities
comtradrInterface with the United Nations Comtrade API
con2aqiCalculate the AQI from Pollutant Concentration
con2lkiCalculate the Dutch Air Quality Index (LKI)
ConakeContinuous Associated Kernel Estimation
concatenateHuman-Friendly Text from Unknown Strings
concatipedeEasy Concatenation of Fasta Sequences
concavemanA Very Fast 2D Concave Hull Algorithm
conclustPairwise Constraints Clustering
concomConnected Components of an Undirected Graph
ConconiAnaerobicThresholdTestConconi Estimate of Anaerobic Threshold from a TCX File
ConConPiWiFunOptimisation with Continuous Convex Piecewise (Linear and Quadratic) Functions
concordanceProduct Concordance
ConcordanceTestAn Alternative to the Kruskal-Wallis Based on the Kendall Tau Distance
concorRCONCOR and Supplemental Functions
concstatsMarket Structure, Concentration and Inequality Measures
CONCURCopy Number Profile Curve-Based Association Test
condApproximate Conditional Inference for Logistic and Loglinear Models
CondCopulasEstimation and Inference for Conditional Copula Models
condensrAcademic Group Website Generator
condformatConditional Formatting in Data Frames
condGEEParameter Estimation in Conditional GEE for Recurrent Event Gap Times
CondIndTestsNonlinear Conditional Independence Tests
condirComputation of P Values and Bayes Factors for Conditioning Data
CondiSCensored Data Imputation for Direct Modeling
conditionzControl How Many Times Conditions are Thrown
condMVNormConditional Multivariate Normal Distribution
CondMVTConditional Multivariate t Distribution, Expectation Maximization Algorithm, and Its Stochastic Variants
condorInteract with 'Condor' from R via SSH
condorOptionsTrading Condor Options Strategies
condSURVEstimation of the Conditional Survival Function for Ordered Multivariate Failure Time Data
condTruncMVNConditional Truncated Multivariate Normal Distribution
conductorCreate Tours in 'Shiny' Apps Using 'Shepherd.js'
conduscoQuery-Driven Pipeline Execution and Query Templates
condvisConditional Visualization for Statistical Models
condvis2Interactive Conditional Visualization for Supervised and Unsupervised Models in Shiny
coneprojPrimal or Dual Cone Projections with Routines for Constrained Regression
confVisualization and Analysis of Statistical Measures of Confidence
conf.designConstruction of factorial designs
confconsConfidence and Consistency of Predictive Distribution Models
confidenceConfidence Estimation of Environmental State Classifications
ConfidenceEllipseComputation of 2D and 3D Elliptical Joint Confidence Regions
configManage Environment Specific Configuration Values
ConfigParserPackage to Parse an INI File, Including Variable Interpolation
configrAn Implementation of Parsing and Writing Configuration File (JSON/INI/YAML/TOML)
configuralMultivariate Profile Analysis
confinterpretDescriptive Interpretations of Confidence Intervals
confintrConfidence Intervals
confintROBConfidence Intervals for Robust and Classical Linear Mixed Model Estimators
ConfIntVarianceConfidence Interval for the Univariate Population Variance without Normality Assumption
conflictedAn Alternative Conflict Resolution Strategy
conflrClient for 'Confluence' API
conformalbayesJackknife(+) Predictive Intervals for Bayesian Models
conformalClassificationTransductive and Inductive Conformal Predictions for Classification Problems
conformalInference.fdTools for Conformal Inference for Regression in Multivariate Functional Setting
conformalInference.multiConformal Inference Tools for Regression with Multivariate Response
conformalpvalueComputes Conformal p-Values
ConformalSmallestEfficient Tuning-Free Conformal Prediction
confreqConfigural Frequencies Analysis Using Log-Linear Modeling
confSAMEstimates and Bounds for the False Discovery Proportion, by Permutation
ConfusionTableRConfusion Matrix Toolset
ConfZICConfidence Envelopes for Model Selection Criteria Based on Minimum ZIC
congressAccess the Congress.gov API
CongreveLamsdell2016Distance Metrics for Trees Generated by Congreve and Lamsdell
CoNICorrelation Guided Network Integration (CoNI)
conicfitAlgorithms for Fitting Circles, Ellipses and Conics Based on the Work by Prof. Nikolai Chernov
ConigraveFlexible Tools for Multiple Imputation
conjointAn Implementation of Conjoint Analysis Method
conjurerA Parametric Method for Generating Synthetic Data
conleyregEstimations using Conley Standard Errors
conmetConstruct Measurement Evaluation Tool
ConNEcTContingency Measure-Based Networks for Binary Time Series
connectapiUtilities for Interacting with the 'Posit Connect' Server API
ConnectednessApproachConnectedness Approach
connectionsIntegrates with the 'RStudio' Connections Pane and 'pins'
connectoModaDownload Data from Moda
connectwidgetsOrganize and Curate Your Content Within 'Posit Connect'
ConnMatToolsTools for Working with Connectivity Data
conogiveCongeneric Normal-Ogive Model
conosClustering on Network of Samples
conover.testConover-Iman Test of Multiple Comparisons Using Rank Sums
conquerConvolution-Type Smoothed Quantile Regression
conquestrAn R Package to Extend 'ACER ConQuest'
conradClient for the Microsoft's 'Cognitive Services Text to Speech REST' API
ConsensusClusteringConsensus Clustering
ConsensusOPLSConsensus OPLS for Multi-Block Data Fusion
conserveRIdentifying Conservation Prioritization Methods Based on Data Availability
consolechoiceAn Easy and Quick Way to Loop a Character Vector as a Menu in the Console
consortCreate Consort Diagram
consortrInteractive Consort Flow Diagrams
ConSplinePartial Linear Least-Squares Regression using Constrained Splines
ConsRankCompute the Median Ranking(s) According to the Kemeny's Axiomatic Approach
ConsRankClassClassification and Clustering of Preference Rankings
ConsRegFits Regression & ARMA Models Subject to Constraints to the Coefficient
constantsReference on Constants, Units and Uncertainty
constellationIdentify Event Sequences Using Time Series Joins
constrainedKrigingConstrained, Covariance-Matching Constrained and Universal Point or Block Kriging
conStructModels Spatially Continuous and Discrete Population Genetic Structure
constructiveDisplay Idiomatic Code to Construct Most R Objects
contactdataSocial Contact Matrices for 177 Countries
containerExtending Base 'R' Lists
ContaminatedMixtClustering and Classification with the Contaminated Normal
contentidAn Interface for Content-Based Identifiers
conText'a la Carte' on Text (ConText) Embedding Regression
contfracContinued Fractions
contFracRContinued Fraction Generators and Evaluators
contingencyDiscrete Multivariate Probability Distributions
contingencytablesStatistical Analysis of Contingency Tables
contoureRContouring of Non-Regular Three-Dimensional Data
ContourFunctionsCreate Contour Plots from Data or a Function
contourPlotPlots x,y,z Co-Ordinates in a Contour Map
contrastA Collection of Contrast Methods
conTreeContrast Trees and Boosting
ContRespPPPredictive Probability for a Continuous Response with an ANOVA Structure
contributionA Tiny Contribution Table Generator Based on 'ggplot2'
controlA Control Systems Toolbox
controlfunctionIVControl Function Methods with Possibly Invalid Instrumental Variables
controlTestQuantile Comparison for Two-Sample Right-Censored Survival Data
contsurvplotVisualize the Effect of a Continuous Variable on a Time-to-Event Outcome
contTimeCausalContinuous Time Causal Models
convdistrConvolute Probabilistic Distributions
ConvergenceClubsFinding Convergence Clubs
ConvergenceConceptsSeeing Convergence Concepts in Action
convergEUMonitoring Convergence of EU Countries
convertBCDConvert Decimal to Binary-Coded Decimal (BCD) Form and Vice Versa
convertbondsUse the Given Parameters to Calculate the European Option Value
convertidConvert Gene IDs Between Each Other and Fetch Annotations from Biomart
ConvertParEstimating IRT Parameters via Machine Learning Algorithms
convertrConvert Between Units
convevolAnalysis of Convergent Evolution
conveyIncome Concentration Analysis with Complex Survey Samples
ConvolutionerConvolution of Data
convoSPATConvolution-Based Nonstationary Spatial Modeling
cooccurProbabilistic Species Co-Occurrence Analysis in R
CooccurrenceAffinityAffinity in Co-Occurrence Data
cookiecutterGenerate Project Files from a Template
cookiemonsterYour Friendly Solution to Managing Browser Cookies
cookiesUse Browser Cookies with 'shiny'
CoOLCauses of Outcome Learning
cooltoolsPractical Tools for Scientific Computations and Visualizations
coopCo-Operation: Fast Covariance, Correlation, and Cosine Similarity Operations
CoopGameImportant Concepts of Cooperative Game Theory
CoordinateCleanerAutomated Cleaning of Occurrence Records from Biological Collections
CooRTweetCoordinated Networks Detection on Social Media
copBasicGeneral Bivariate Copula Theory and Many Utility Functions
copCARFitting the copCAR Regression Model for Discrete Areal Data
copcorCorrelates of Protection and Correlates of Risk Functions
CopCTSCopula-Based Semiparametric Analysis for Time Series Data with Detection Limits
copeCoverage Probability Excursion (CoPE) Sets
copentEstimating Copula Entropy and Transfer Entropy
CopernicusDEMCopernicus Digital Elevation Models
CopernicusMarineSearch Download and Handle Data from Copernicus Marine Service Information
cophescanAdaptation of the Coloc Method for PheWAS
coppeCosenzaRCOPPE-Cosenza Fuzzy Hierarchy Model
copreTools for Nonparametric Martingale Posterior Sampling
copsCluster Optimized Proximity Scaling
CopSensCopula-Based Sensitivity Analysis for Observational Causal Inference
copulaMultivariate Dependence with Copulas
Copula.MarkovCopula-Based Estimation and Statistical Process Control for Serially Correlated Time Series
Copula.Markov.survivalCopula Markov Model with Dependent Censoring
Copula.survAnalysis of Bivariate Survival Data Based on Copulas
copulaboostFitting Additive Copula Regression Models for Binary Outcome Regression
CopulaCenRCopula-Based Regression Models for Multivariate Censored Data
copulaDataData Sets for Copula Modeling
copulaedasEstimation of Distribution Algorithms Based on Copulas
CopulaGAMMCopula-Based Mixed Regression Models
CopulaInferenceEstimation and Goodness-of-Fit of Copula-Based Models with Arbitrary Distributions
copularegCopula Regression
CopulaREMADACopula Mixed Models for Multivariate Meta-Analysis of Diagnostic Test Accuracy Studies
copulaSimVirtual Patient Simulation by Copula Invariance Property
copyseparatorAssembling Long Gene Copies from Short Read Data
CORThe COR for Optimal Subset Selection in Distributed Estimation
coraCora Data for Entity Resolution
coRankingCo-Ranking Matrix
corazonApply 'colorffy' Color Gradients Within 'shiny' Elements
CorbiCollection of Rudimentary Bioinformatics Tools
CorBinGenerate High-Dimensional Binary Data with Correlation Structures
corclassCorrelational Class Analysis
cordCommunity Estimation in G-Models via CORD
cordilleraCalculation of the OPTICS Cordillera
CORECores of Recurrent Events
coreCollectionCore Collection
coreCTProgrammatic Analysis of Sediment Cores Using Computed Tomography Imaging
corehunterMulti-Purpose Core Subset Selection
CORElearnClassification, Regression and Feature Evaluation
corelsR Binding for the 'Certifiably Optimal RulE ListS (Corels)' Learner
CoreMicrobiomeRIdentification of Core Microbiome
coreNLPWrappers Around Stanford CoreNLP Tools
coreSimCore Functionality for Simulating Quantities of Interest from Generalised Linear Models
corHMMHidden Markov Models of Character Evolution
corkscrewPreprocessor for Data Modeling
corlinkRecord Linkage, Incorporating Imputation for Missing Agreement Patterns, and Modeling Correlation Patterns Between Fields
CorMIDCorrect Mass Isotopologue Distribution Vectors
corncobCount Regression for Correlated Observations with the Beta-Binomial
CornerstoneRCollection of Scripts for Interface Between 'Cornerstone' and 'R'
cornetElastic Net with Dichotomised Outcomes
coro'Coroutines' for R
coroICAConfounding Robust Independent Component Analysis for Noisy and Grouped Data
coronaCoronavirus ('Rona') Data Exploration
CoronaNetRAPI Access to 'CoronaNet' Data
coronavirusThe 2019 Novel Coronavirus COVID-19 (2019-nCoV) Dataset
corpcorEfficient Estimation of Covariance and (Partial) Correlation
corporaStatistics and Data Sets for Corpus Frequency Data
corporaexplorerA 'Shiny' App for Exploration of Text Collections
CoRpowerPower Calculations for Assessing Correlates of Risk in Clinical Efficacy Trials
corpustoolsManaging, Querying and Analyzing Tokenized Text
corr2DImplementation of 2D Correlation Analysis in R
corrarrayCorrelation Arrays and 2-Sample Correlation Matrices
CorrBinNonparametrics with Clustered Binary and Multinomial Data
corrcoverageCorrecting the Coverage of Credible Sets from Bayesian Genetic Fine Mapping
corrDNAFinding Associations in Position-Wise Aligned DNA Sequence Dataset
correctedAUCCorrecting AUC for Measurement Error
CorrectedFDRCorrecting False Discovery Rates
CorrectOverloadedPeaksCorrect Overloaded Peaks from GC-APCI-MS Data
correctRCorrected Test Statistics for Comparing Machine Learning Models on Correlated Samples
correlationMethods for Correlation Analysis
correlationfunnelSpeed Up Exploratory Data Analysis (EDA) with the Correlation Funnel
correlbinomCorrelated Binomial Probabilities
CorrelplotA Collection of Functions for Graphing Correlation Matrices
correspondenceTablesCreating Correspondence Tables Between Two Statistical Classifications
corrfunsCorrelation Coefficient Related Functions
corrgramPlot a Correlogram
corrgrapherExplore Correlations Between Variables in a Machine Learning Model
corrmetaCorrelated Meta-Analysis
CorrMixedEstimate Correlations Between Repeatedly Measured Endpoints (E.g., Reliability) Based on Linear Mixed-Effects Models
corrplotVisualization of a Correlation Matrix
corrrCorrelations in R
corrsieveSoftware for Summarising and Evaluating STRUCTURE Output
corrtableCreates and Saves Out a Correlation Table with Significance Levels Indicated
CorrToolBoxModeling Correlational Magnitude Transformations in Discretization Contexts
corrVizVisualise Correlations
corsetArbitrary Bounding of Series and Time Series Objects
corTestRobust Tests for Equal Correlation
corTESTsrdSignificance Testing of Rank Cross-Correlations under SRD
cortoInference of Gene Regulatory Networks
corxCreate and Format Correlation Matrices
cosaBound Constrained Optimal Sample Size Allocation
cosimmrFast Fitting of Stable Isotope Mixing Models with Covariates
cosinorTools for Estimating and Predicting the Cosinor Model
cosinor2Extended Tools for Cosinor Analysis of Rhythms
cosmicsigMutational Signatures from COSMIC (Catalogue of Somatic Mutations in Cancer)
cosmoFnsFunctions for Cosmological Distances, Times, Luminosities, Etc
CoSMoSComplete Stochastic Modelling Solution
cossoFit Regularized Nonparametric Regression Models Using COSSO Penalty
COSTCopula-Based Semiparametric Models for Spatio-Temporal Data
costatTime Series Costationarity Determination
costsensitiveCost-Sensitive Multi-Class Classification
CoTiMAContinuous Time Meta-Analysis ('CoTiMA')
cotramCount Transformation Models
cotrendConsistent Co-Trending Rank Selection
COUNTFunctions, Data and Code for Count Data
countcolorsLocates and Counts Pixels Within Color Range(s) in Images
countdataThe Beta-Binomial Test for Count Data
countDMEstimation of Count Data Models
countdownA Countdown Timer for HTML Presentations, Documents, and Web Apps
CounterfactualEstimation and Inference Methods for Counterfactual Analysis
counterfactualsCounterfactual Explanations
CounternullRandomization-Based Inference
countfitteRComprehensive Automatized Evaluation of Distribution Models for Count Data
countgmifsDiscrete Response Regression for High-Dimensional Data
countHMMPenalized Estimation of Flexible Hidden Markov Models for Time Series of Counts
countlandAnalysis of Biological Count Data, Especially from Single-Cell RNA-Seq
countpropCalculate Model-Based Metrics of Proportionality on Count-Based Compositional Data
CountrFlexible Univariate Count Models Based on Renewal Processes
countriesDeal with Country Data in an Easy Way
countrycodeConvert Country Names and Country Codes
CountsEPPMMean and Variance Modeling of Count Data
countsplitSplitting a Count Matrix into Independent Folds
countSTARFlexible Modeling of Count Data
countToFPKMConvert Counts to Fragments per Kilobase of Transcript per Million (FPKM)
countTransformersTransform Counts in RNA-Seq Data Analysis
counttsThomson Sampling for Zero-Inflated Count Outcomes
coursekataPackages and Functions for 'CourseKata' Courses
covadapImplement Covariate-Adaptive Randomization
covafillrLocal Polynomial Regression of State Dependent Covariates in State-Space Models
covatestTests on Properties of Space-Time Covariance Functions
covBMBrownian Motion Processes for 'nlme'-Models
CovCombRCombine Partial Covariance / Relationship Matrices
covdepGECovariate Dependent Graph Estimation
coveffectsplotProduce Forest Plots to Visualize Covariate Effects
covequalTest for Equality of Covariance Matrices
coveR2Process Digital Cover Photography Images of Tree Crowns
covfefeCovfefy Any Word, Sentence or Speech
covglassoSparse Covariance Matrix Estimation
COVID19R Interface to COVID-19 Data Hub
covid19.analyticsLoad and Analyze Live Data from the COVID-19 Pandemic
covid19brBrazilian COVID-19 Pandemic Data
covid19brazilCOVID-19 Dataset for Brazil
covid19dbcandSelected 'Drugbank' Drugs for COVID-19 Treatment Related Data in R Format
covid19franceCases of COVID-19 in France
covid19indiaPulling Clean Data from Covid19india.org
covid19italyThe 2019 Novel Coronavirus COVID-19 (2019-nCoV) Italy Dataset
covid19sfThe Covid19 San Francisco Dataset
covid19srilankaThe 2019 Novel Coronavirus COVID-19 (2019-nCoV) Data in Sri Lanka
covid19swissCOVID-19 Cases in Switzerland and Principality of Liechtenstein
covid19tunisiaCases of COVID-19 in Tunisia
covid19usCases of COVID-19 in the United States
covidcastClient for Delphi's 'COVIDcast Epidata' API
COVIDIBGEDownloading, Reading and Analyzing PNAD COVID19 Microdata
CovidMutationsMutation Analysis Toolkit for COVID-19 (Coronavirus Disease 2019)
covidmxDescarga y analiza datos de COVID-19 en México
covidnorPublic COVID-19 Data for Norway
covidprobabilityEstimate the Unit-Wide Probability of COVID-19
covidsymptomCOVID Symptom Study Sweden Open Dataset
covKCDCovariance Estimation for Matrix Data with the Kronecker-Core Decomposition
covrTest Coverage for Packages
CovRegRFCovariance Regression with Random Forests
covRobustRobust Covariance Estimation via Nearest Neighbor Cleaning
CovSelModel-Free Covariate Selection
covsepTests for Determining if the Covariance Structure of 2-Dimensional Data is Separable
covsimVITA, IG and PLSIM Simulation for Given Covariance and Marginals
covTestRCovariance Matrix Tests
CovToolsStatistical Tools for Covariance Analysis
covtracerContextualizing Tests
cowbellPerforms Segmented Linear Regression on Two Independent Variables
cowplotStreamlined Plot Theme and Plot Annotations for 'ggplot2'
cowsayMessages, Warnings, Strings with Ascii Animals
CoxAIPWDoubly Robust Inference for Cox Marginal Structural Model with Informative Censoring
CoxBcvBias-Corrected Sandwich Variance Estimators for Marginal Cox Analysis of Cluster Randomized Trials
coxedDuration-Based Quantities of Interest for the Cox Proportional Hazards Model
coxerrCox Regression with Dependent Error in Covariates
CoxICPenVariable Selection for Cox's Model with Interval-Censored Data
coxmeMixed Effects Cox Models
CoxmosCox MultiBlock Survival
coxphfCox Regression with Firth's Penalized Likelihood
coxphSGDStochastic Gradient Descent log-Likelihood Estimation in Cox Proportional Hazards Model
coxphwWeighted Estimation in Cox Regression
CoxPlusCox Regression (Proportional Hazards Model) with Multiple Causes and Mixed Effects
CoxR2R-Squared Measure Based on Partial LR Statistic, for the Cox PH Regression Model
coxrobustFit Robustly Proportional Hazards Regression Model
coxrtCox Proportional Hazards Regression for Right-Truncated Data
coxseiFitting a CoxSEI Model
CPConditional Power Calculations
cp4pCalibration Plot for Proteomics
cpaConfirmatory Path Analysis Through 'd-sep' Tests
CPATChange Point Analysis Tests
CPBayesBayesian Meta Analysis for Studying Cross-Phenotype Genetic Associations
CPCImplementation of Cluster-Polarization Coefficient
CPCATThe Closure Principle Computational Approach Test
cPCGEfficient and Customized Preconditioned Conjugate Gradient Method for Solving System of Linear Equations
cpdComplex Pearson Distributions
CPEConcordance Probability Estimates in Survival Analysis
cpfaClassification with Parallel Factor Analysis
CpGassocAssociation Between Methylation and a Phenotype of Interest
CpGFilterCpG Filtering Method Based on Intra-Class Correlation Coefficients
CPGLIBCompeting Proximal Gradients Library
cpiConditional Predictive Impact
cplmCompound Poisson Linear Models
cplotsPlots for Circular Data
cpmSequential and Batch Change Detection Using Parametric and Nonparametric Methods
cpmBigDataFitting Semiparametric Cumulative Probability Models for Big Data
CPMCGLMCorrection of the P-Value after Multiple Coding in Generalized Linear Models
CpmERCCutoffCalculation of Log2 Counts per Million Cutoff from ERCC Controls
cpmrConnectome Predictive Modelling in R
CPNCoverageAnalysisConceptual Properties Norming Studies as Parameter Estimation
cpopDetection of Multiple Changes in Slope in Univariate Time-Series
CPoptimConvex Partition Optimisation
CPPComposition of Probabilistic Preferences (CPP)
cpp11A C++11 Interface for R's C Interface
cpp11armadilloAn 'Armadillo' Interface
cppcheckRCheck 'C' and 'C++' Files using 'Cppcheck'
cppdoublesFast Relative Comparisons of Floating Point Numbers in 'C++'
cppRoutingAlgorithms for Routing and Solving the Traffic Assignment Problem
cprControl Polygon Reduction
cprobitConditional Probit Model for Analysing Continuous Outcomes
cprrFunctions for Working with Danish CPR Numbers
cPseudoMaRgConstructs a Correlated Pseudo-Marginal Sampler
cpsRLoad CPS Microdata into R Using the 'Census Bureau Data' API
cpssChange-Point Detection by Sample-Splitting Methods
CPsurvNonparametric Change Point Estimation for Survival Data
cpsurvsimSimulating Survival Data from Change-Point Hazard Distributions
cpsvoteA Toolbox for Using the CPS’s Voting and Registration Supplement
cptClassification Permutation Test
cptcity'cpt-city' Colour Gradients
CptNonParNonparametric Change Point Detection for Multivariate Time Series
cqrRegQuantile, Composite Quantile Regression and Regularized Versions
cquadConditional Maximum Likelihood for Quadratic Exponential Models for Binary Panel Data
CR2Compute Cluster Robust Standard Errors with Degrees of Freedom Adjustments
CRABSCongruent Rate Analyses in Birth-Death Scenarios
craggTests for Weak Instruments in R
cramerMultivariate Nonparametric Cramer-Test for the Two-Sample-Problem
crandepNetwork Analysis of Dependencies of CRAN Packages
crankCompleting Ranks
cranlikeTools for 'CRAN'-Like Repositories
cranlogsDownload Logs from the 'RStudio' 'CRAN' Mirror
cranlyPackage Directives and Collaboration Networks in CRAN
CRANsearcherRStudio Addin for Searching Packages in CRAN Database Based on Keywords
crassmatConditional Random Sampling Sparse Matrices
crawlFit Continuous-Time Correlated Random Walk Models to Animal Movement Data
crayonColored Terminal Output
crayonsColor Palettes from Crayon Boxes
crc32cCyclic Redundancy Check with CPU-Specific Acceleration
crchCensored Regression with Conditional Heteroscedasticity
crctStepdownUnivariate Analysis of Cluster Trials with Multiple Outcomes
CREInterpretable Discovery and Inference of Heterogeneous Treatment Effects
CREAMClustering of Genomic Regions Analysis Method
createLogicalPCMCreate Logical Pairwise Comparison Matrix for the Analytic Hierarchy Process
credentialsTools for Managing SSH and Git Credentials
CRediTasGenerate CRediT Author Statements
creditmodelToolkit for Credit Modeling, Analysis and Visualization
CreditRiskEvaluation of Credit Risk with Structural and Reduced Form Models
CREDSCalibrated Ratio Estimator under Double Sampling Design
credsubsCredible Subsets
creduleCredit Default Swap Functions
creggSimple Conjoint Tidying, Analysis, and Visualization
crewA Distributed Worker Launcher Framework
crew.aws.batchA Crew Launcher Plugin for AWS Batch
crew.clusterCrew Launcher Plugins for Traditional High-Performance Computing Clusters
CRFConditional Random Fields
crfsuiteConditional Random Fields for Labelling Sequential Data in Natural Language Processing
cricketdataInternational Cricket Data
cricketrAnalyze Cricketers and Cricket Teams Based on ESPN Cricinfo Statsguru
crimCVGroup-Based Modelling of Longitudinal Data
crimedataAccess Crime Data from the Open Crime Database
crimeutilsA Comprehensive Set of Functions to Clean, Analyze, and Present Crime Data
crispFits a Model that Partitions the Covariate Space into Blocks in a Data- Adaptive Way
crispRdesignRGuide Sequence Design for CRISPR/Cas9
criticalityModeling Fissile Material Operations in Nuclear Facilities
criticalpathAn Implementation of the Critical Path Method
critpathSetting the Critical Path in Project Management
CRMContinual Reassessment Method (CRM) for Phase I Clinical Trials
crm12CombPhase I/II CRM Based Drug Combination Design
CRMetricsCell Ranger Output Filtering and Metrics Visualization
crmnCCMN and Other Normalization Methods for Metabolomics Data
crmPackObject-Oriented Implementation of CRM Designs
crmRegCellwise Robust M-Regression and SPADIMO
crochetImplementation Helper for '[' and '[<-' of Custom Matrix-Like Types
cromwellDashboardA Dashboard to Visualize Scientific Workflows in 'Cromwell'
CronbachCronbach's Alpha
croneStructural Crystallography in 1d
cronologiaCreate an HTML Vertical Timeline from a Data Frame in 'rmarkdown' and 'shiny'
cronRSchedule R Scripts and Processes with the 'cron' Job Scheduler
cropGraphics Cropping Tool
cropcirclesCrops an Image to a Circle
cropdatapeOpen Data of Agricultural Production of Crops of Peru
cropDemandSpatial Crop Water Demand for Brazil
cropgrowdaysCrop Growing Degree Days and Agrometeorological Calculations
cropsChangepoints for a Range of Penalties (CROPS)
CropScapeRAccess Cropland Data Layer Data via the 'CropScape' Web Service
CropWaterBalanceClimate Water Balance for Irrigation Purposes
cropZoningClimate Crop Zoning Based in Air Temperature for Brazil
CrossCarryAnalysis of Data from a Crossover Design with GEE
CrossClusteringA Partial Clustering Algorithm
crossdesConstruction of Crossover Designs
crosshapLocal Haplotype Clustering and Visualization
crosslagPerform Linear or Nonlinear Cross Lag Analysis
crossmapApply Functions to All Combinations of List Elements
crossmatchThe Cross-Match Test
crossnmaCross-Design & Cross-Format Network Meta-Analysis and Regression
CrossoverAnalysis and Search of Crossover Designs
crossrunJoint Distribution of Number of Crossings and Longest Run
crosstableCrosstables for Descriptive Analyses
Crosstabs.LoglinearCross Tabulation and Loglinear Analyses of Categorical Data
crosstalkInter-Widget Interactivity for HTML Widgets
crosstalkrAnalysis of Graph-Structured Data with a Focus on Protein-Protein Interaction Networks
crossurrCross-Fitting for Doubly Robust Evaluation of High-Dimensional Surrogate Markers
CrossVAVerbal Autopsy Data Transformation for InSilicoVA and InterVA5 Algorithms
crossvalGeneric Functions for Cross Validation
CrossValidateClasses and Methods for Cross Validation of "Class Prediction" Algorithms
crossvalidationCPCross-Validation for Change-Point Regression
crosswalkrRename and Encode Data Frames Using External Crosswalk Files
crossword.rGenerating Crosswords from Word Lists
crovConstrained Regression Model for an Ordinal Response and Ordinal Predictors
crplyrA 'dplyr' Interface for Crunch
crqaUnidimensional and Multidimensional Methods for Recurrence Quantification Analysis
crrcbcvBias-Corrected Variance for Competing Risks Regression with Clustered Data
crrSCCompeting Risks Regression for Stratified and Clustered Data
crrstepStepwise Covariate Selection for the Fine & Gray Competing Risks Regression Model
crsCategorical Regression Splines
crseEventStudyA Robust and Powerful Test of Abnormal Stock Returns in Long-Horizon Event Studies
crsmetaExtract Coordinate System Metadata
crsnlsNonlinear Regression Parameters Estimation by 'CRS4HC' and 'CRS4HCe'
crsoCancer Rule Set Optimization ('crso')
crsraTidying and Analyzing 'Coursera' Research Export Data
crsuggestObtain Suggested Coordinate Reference System Information for Spatial Data
crt2powerDesigning Cluster-Randomized Trials with Two Co-Primary Outcomes
CRTConjointConditional Randomization Testing (CRT) Approach for Conjoint Analysis
CRTgeeDRDoubly Robust Inverse Probability Weighted Augmented GEE Estimator
CRTSizeSample Size Estimation Functions for Cluster Randomized Trials
CRTspatWorkflow for Cluster Randomised Trials with Spillover
crulHTTP Client
crunchCrunch.io Data Tools
crunchyShiny Apps on Crunch
crutsInterface to Climatic Research Unit Time-Series Version 3.21 Data
CruzPlotPlot Shipboard DAS Data
crwbmetaregCluster Robust Wild Bootstrap Meta Regression
CRWRMChanging the Reference Group without Re-Running the Model
cryStatistics for Structural Crystallography
crypto2Download Crypto Currency Data from 'CoinMarketCap' without 'API'
cryptographyEncrypts and Decrypts Text Ciphers
cryptoQuotesA Streamlined Access to Cryptocurrency OHLC-V Market Data and Sentiment Indicators
cryptorngAccess System Cryptographic Pseudorandom Number Generators
cryptotrackrAn Interface to Crypto Data Sources
cryptoverseVisualization and Analytics for the Cryptoverse
cryptowatchRAn API Wrapper for 'Cryptowatch'
CryptRndTestStatistical Tests for Cryptographic Randomness
crystCalculate the Relative Crystallinity of Starch by XRD and FTIR
csaA Cross-Scale Analysis Tool for Model-Observation Visualization and Integration
csalertAlerts from Public Health Surveillance Data
csamplingFunctions for Conditional Simulation in Regression-Scale Models
CsChangeTesting for Change in C-Statistic
csciCurrent Status Confidence Intervals
CScloneBayesian Nonparametric Modeling in R
CSCNetFitting and Tuning Regularized Cause-Specific Cox Models with Elastic-Net Penalty
csdataStructural Data for Norway
cSEMComposite-Based Structural Equation Modeling
CSeqpatFrequent Contiguous Sequential Pattern Mining of Text
CSESACRISPR-Based Salmonella Enterica Serotype Analyzer
CSGoCollecting Counter Strike Global Offensive Data
cshapesThe CShapes 2.0 Dataset and Utilities
CSHShydRologyCanadian Hydrological Analyses
CSIndicatorsClimate Services' Indicators Based on Sub-Seasonal to Decadal Predictions
csmapsPreformatted Maps of Norway that Don't Need Geolibraries
CSMESCost-Sensitive Multi-Criteria Ensemble Selection for Uncertain Cost Conditions
csmpvBiomarker Confirmation, Selection, Modelling, Prediction, and Validation
csnClosed Skew-Normal Distribution
csodataDownload Data from the CSO 'PxStat' API
cspecComplete Discrete Fourier Transform (DFT) and Periodogram
csppA Tool for the Correlates of State Policy Project Data
csppDataData Only: The Correlates of State Policy Project Dataset
csquaresConcise Spatial Query and Representation System (c-Squares)
csranksStatistical Tools for Ranks
cssToolsCognitive Social Structure Tools
cstabSelection of Number of Clusters via Normalized Clustering Instability
cstidyHelpful Functions for Cleaning Surveillance Data
cstimeDate and Time Functions for Public Health Purposes
CSToolsAssessing Skill of Climate Forecasts on Seasonal-to-Decadal Timescales
csurveyConstrained Regression for Survey Data
csutilCommon Base-R Problems Relating to Lists
csvRead and Write CSV Files with Selected Conventions
csvreadFast Specialized CSV File Loader
csvwrRead and Write CSV on the Web (CSVW) Tables and Metadata
csvyImport and Export CSV Data with a YAML Metadata Header
ctaContingency Table Analysis Based on ML Fitting of MPH Models
CTAShinyInteractive Application for Working with Contingency Tables
ctbiA Procedure to Clean, Decompose and Aggregate Timeseries
CTDA Method for 'Connecting The Dots' in Weighted Graphs
ctfRead and Write Column Text Format (CTF)
ctgdistLikert Category Distance Calculator
ctgtClosed Testing with Globaltest for Pathway Analysis
cthistClinical Trial Registry History
cthreshERContinuous Threshold Expectile Regression
ctlCorrelated Trait Locus Mapping
CTMA Text Mining Toolkit for Chinese Document
ctmcdEstimating the Parameters of a Continuous-Time Markov Chain from Discrete-Time Data
ctmcmoveModeling Animal Movement with Continuous-Time Discrete-Space Markov Chains
ctmleCollaborative Targeted Maximum Likelihood Estimation
ctmmContinuous-Time Movement Modeling
ctmvaContinuous-Time Multivariate Analysis
CTNoteCTN Outcomes, Treatments, and Endpoints
cTOSTFinite Sample Correction of the Two One-Sided Tests in the Univariate Framework
ctpmContinuous-Time Phylogenetic Modeling
ctqrCensored and Truncated Quantile Regression
ctrdataRetrieve and Analyze Clinical Trials in Public Registers
ctrialsgovQuery Data from U.S. National Library of Medicine's Clinical Trials Database
ctrlGeneAssess the Stability of Candidate Housekeeping Genes
ctsemContinuous Time Structural Equation Modelling
ctsemOMXContinuous Time SEM - 'OpenMx' Based Functions
ctsfeaturesAnalyzing Categorical Time Series
CTShinyInteractive Document for Working with Classification Tree Analysis
CTShiny2Interactive Document for Working with Classification Tree Analysis
CTTClassical Test Theory Functions
CTTinShinyShiny Interface for the CTT Package
CTTShinyClassical Test Theory via Shiny
ctvCRAN Task Views
ctxRUtilities for Interacting with the 'CTX' APIs
CUBA Class of Mixture Models for Ordinal Data
cubarCodon Usage Bias Analysis
cubatureAdaptive Multivariate Integration over Hypercubes
cubbleA Vector Spatio-Temporal Data Structure for Data Analysis
cubelyrA Data Cube 'dplyr' Backend
cubeviewView 3D Raster Cubes Interactively
cubfitsCodon Usage Bias Fits
cubicBsplinesComputation of a Cubic B-Spline Basis and Its Derivatives
cubingRubik's Cube Solving
CubistRule- And Instance-Based Regression Modeling
cucumberBehavior-Driven Development for R
cuda.mlR Interface for the RAPIDS cuML Suite of Libraries
CUFFCharles's Utility Function using Formula
cultevoTools, Measures and Statistical Tests for Cultural Evolution
CUMPAnalyze Multivariate Phenotypes by Combining Univariate Results
cumprincFunctions Centered Around Microsoft Excel Cumprinc Function
cumSegChange Point Detection in Genomic Sequences
cumstatsCumulative Descriptive Statistics
cumulcalibCumulative Calibration Assessment for Prediction Models
cumulocityrClient for the 'Cumulocity' API
cuperdecCumulative Percent Decay Curve Generator
cuReParametric Cure Model Estimation
CureAuxSPMixture Cure Models with Auxiliary Subgroup Survival Probabilities
CureDepCensDependent Censoring Regression Models with Cure Fraction
curephEMNPMLE for Logistic-Cox Cure-Rate Model
cureplotsCURE (Cumulative Residual) Plots
curlA Modern and Flexible Web Client for R
currencyapiClient for the 'currencyapi.com' Currency Conversion API
currentSurvivalEstimation of CCI and CLFS Functions
CurricularAnalyticsExploring and Analyzing Academic Curricula
currrApply Mapping Functions in Frequent Saving
curryPartial Function Application with %<%, %-<%, and %><%
cursrCursor and Terminal Manipulation
curstatCIConfidence Intervals for the Current Status Model
curtailmentFinds Binary Outcome Designs Using Stochastic Curtailment
curvecompMultiple Curve Comparisons Using Parametric Bootstrap
curveDepthTukey Curve Depth and Distance in the Space of Curves
curvHDRFiltering of Flow Cytometry Samples
curvirSpecify Reserve Demand Curves
cuspCusp-Catastrophe Model Fitting Using Maximum Likelihood
custom.gauss.quadCustom Made Gauss Quadrature Nodes and Weights
CustomDerivativePricing Various Types of Custom Derivatives
CustomerScoringMetricsEvaluation Metrics for Customer Scoring Models Depending on Binary Classifiers
customiserUse R Markdown to Write your "Rprofile"
customizedTrainingCustomized Training for Lasso and Elastic-Net Regularized Generalized Linear Models
CustosAscensorCosts Allocation for the Installation of an Elevator
cusumCumulative Sum (CUSUM) Charts for Monitoring of Hospital Performance
cusumcharterEasier CUSUM Control Charts
CUSUMdesignCompute Decision Interval and Average Run Length for CUSUM Charts
cutoffSeek the Significant Cutoff Value
cutpointrDetermine and Evaluate Optimal Cutpoints in Binary Classification Tasks
CutpointsOEHROptimal Equal-HR Method to Find Two Cutpoints for U-Shaped Relationships in Cox Model
cvCross-Validating Regression Models
cvapCitizen Voting Age Population
cvarCompute Expected Shortfall and Value at Risk for Continuous Distributions
cvasiCalibration, Validation, and Simulation of TKTD Models
cvAUCCross-Validated Area Under the ROC Curve Confidence Intervals
cvCovEstCross-Validated Covariance Matrix Estimation
cvcrandEfficient Design and Analysis of Cluster Randomized Trials
CVDColor Vision Deficiencies
cvequalityTests for the Equality of Coefficients of Variation from Multiple Groups
cvGEECross-Validated Predictions from GEE
CVglassoLasso Penalized Precision Matrix Estimation
cvmaPLFAMCross-Validation Model Averaging for Partial Linear Functional Additive Models
cvmdiscCramer von Mises Tests for Discrete or Grouped Distributions
cvmgofCramer-von Mises Goodness-of-Fit Tests
CvmortalityMultCross-Validation for Multi-Population Mortality Models
cvmsCross-Validation for Model Selection
CVRCanonical Variate Regression
CVriskCompute Risk Scores for Cardiovascular Diseases
cvsemSEM Model Comparison with K-Fold Cross-Validation
CVSTFast Cross-Validation via Sequential Testing
CVThreshLevel-Dependent Cross-Validation Thresholding
cvToolsCross-Validation Tools for Regression Models
cvwraprTools for Cross Validation
CVXRDisciplined Convex Optimization
cwbtoolsTools to Create, Modify and Manage 'CWB' Corpora
cwotCauchy Weighted Joint Test for Pharmacogenetics Analysis
CWTContinuous Wavelet Transformation for Spectroscopy
cxhullConvex Hull
cxrA Toolbox for Modelling Species Coexistence in R
cxxfunplusExtend 'cxxfunction' by Saving the Dynamic Shared Objects
cycleRtoolsTools for Cycling Data Analysis
cyclestreetsCycle Routing and Data for Cycling Advocacy
cyclocompCyclomatic Complexity of R Code
cycloidsTools for Calculating Hypocycloids, Epicycloids, Hypotrochoids, and Epitrochoids
cyclomortSurvival Modeling with a Periodic Hazard Function
CyclopsCyclic Coordinate Descent for Logistic, Poisson and Survival Analysis
cyclotomicThe Field of Cyclotomic Numbers
cyjShinyCytoscape.js Shiny Widget (cyjShiny)
cylcopCircular-Linear Copulas with Angular Symmetry for Movement Data
cymruservicesQuery 'Team Cymru' 'IP' Address, Autonomous System Number ('ASN'), Border Gateway Protocol ('BGP'), Bogon and 'Malware' Hash Data Services
cyphrHigh Level Encryption Wrappers
cystiSimAgent-Based Model for Taenia_solium Transmission and Control
CytobankAPICytobank API Wrapper for R
cytofanPlot Fan Plots for Cytometry Data using 'ggplot2'
cytometreeAutomated Cytometry Gating and Annotation
cytominerMethods for Image-Based Cell Profiling
CytOpTOptimal Transport for Gating Transfer in Cytometry Data with Domain Adaptation
CytoSimplexSimplex Visualization of Cell Fate Similarity in Single-Cell Data
czechratesCzech Interest & Foreign Exchange Rates
czsoUse Open Data from the Czech Statistical Office in R
D2MCSData Driving Multiple Classifier System
D3GBInteractive Genome Browser
D3mirtDescriptive 3D Multidimensional Item Response Theory Modelling
d3NetworkTools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R
D3partitionRInteractive Charts of Nested and Hierarchical Data with 'D3.js'
d3plusSeamless 'D3Plus' Integration
d3poFast and Beautiful Interactive Visualization for 'Markdown' and 'Shiny'
d3r'd3.js' Utilities for R
d3TreeCreate Interactive Collapsible Trees with the JavaScript 'D3' Library
d4storagehub4RInterface to 'D4Science' 'StorageHub' API
D4TAlink.lightFAIR Data - Workflow Management
DADiscriminant Analysis for Evolutionary Inference
DAAGData Analysis and Graphics Data and Functions
DAAGbioData Sets and Functions, for Demonstrations with Expression Arrays and Gene Sequences
daaremDamped Anderson Acceleration with Epsilon Monotonicity for Accelerating EM-Like Monotone Algorithms
dabestrData Analysis using Bootstrap-Coupled Estimation
dabrDatabase Management with R
daccDetection and Attribution Analysis of Climate Change
DACFData Analysis with Ceiling and/or Floor Data
dadThree-Way / Multigroup Data Analysis Through Densities
dadjokeDisplays a Dad Joke
dadjokeapiReturn a Random Dad Joke
dadosTranslate Datasets to Portuguese
daeFunctions Useful in the Design and ANOVA of Experiments
daewrDesign and Analysis of Experiments with R
daffDiff, Patch and Merge for Data.frames
dafishrDownload, Wrangle, and Analyse Vessel Monitoring System Data
dafsData Analysis for Forensic Scientists
dagirliteSpatial Vector Data for Danmarks Administrative Geografiske Inddeling DAGI
dagittyGraphical Analysis of Structural Causal Models
dagRDirected Acyclic Graphs: Analysis and Data Simulation
dagwoodDAGs with Omitted Objects Displayed (DAGWOOD)
dailData from Access to Information Law
DAIMEEffects of Changing Deposition Rates
daiquiriData Quality Reporting for Temporal Datasets
daiRInterface with Google Cloud Document AI API
DAISIEDynamical Assembly of Islands by Speciation, Immigration and Extinction
DAISIEprepExtracts Phylogenetic Island Community Data from Phylogenetic Trees
DAKSData Analysis and Knowledge Spaces
DALEXmoDel Agnostic Language for Exploration and eXplanation
DALEXtraExtension for 'DALEX' Package
DALSMNonparametric Double Additive Location-Scale Model (DALSM)
daltoolboxLeveraging Experiment Lines to Data Analytics
daltoolboxdpData Pre-Processing Extensions
DALYThe DALY Calculator - Graphical User Interface for Probabilistic DALY Calculation in R
damData Analysis Metabolomics
damAOICreate an 'Area of Interest' Around a Constructed Dam for Comparative Impact Evaluations
DamiaNNNeural Network Numerai
DAMOCLESDynamic Assembly Model of Colonization, Local Extinction and Speciation
damrInterface to Drosophila Activity Monitor System Result Files
damsDams in the United States from the National Inventory of Dams (NID)
DandEFADandelion Plot for R-Mode Exploratory Factor Analysis
dang'Dang' Associated New Goodies
daniDesign and Analysis of Non-Inferiority Trials
DanielBiostatistics10thFunctions for Wayne W. Daniel's Biostatistics, Tenth Edition
dannDiscriminant Adaptive Nearest Neighbor Classification
danstatR Client for the Statistics Denmark Databank API
dapperData Augmentation for Private Posterior Estimation
daqapoData Quality Assessment for Process-Oriented Data
DArandDifferential Analysis with Random Reference Genes
DarkThe Analysis of Dark Adaptation Data
DarkDivEstimating Dark Diversity and Site-Specific Species Pools
darkskyTools to Work with the 'Dark Sky' 'API'
dartRImporting and Analysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide Restriction Fragment Analysis
dartR.baseAnalysing 'SNP' and 'Silicodart' Data - Basic Functions
dartR.captiveAnalysing 'SNP' Data to Support Captive Breeding
dartR.dataAuxiliary Data Package for Our Main Package 'dartR'
dartR.popgenAnalysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide Restriction Fragment Analysis
dartR.sexlinkedAnalysing SNP Data to Identify Sex-Linked Markers
dartR.simComputer Simulations of 'SNP' Data
dartR.spatialApplying Landscape Genomic Methods on 'SNP' and 'Silicodart' Data
dartRverseInstall and Load the 'dartRverse' Suits of Packages
dashboardthemesCustomise the Appearance of 'shinydashboard' Applications using Themes
DasstTools for Reading, Processing and Writing 'DSSAT' Files
datTools for Data Manipulation
data.tableExtension of 'data.frame'
data.treeGeneral Purpose Hierarchical Data Structure
data.validatorAutomatic Data Validation and Reporting
data360rWrapper for 'TCdata360' and 'Govdata360' API
DatabaseConnectorConnecting to Various Database Platforms
DatabaseConnectorJarsJAR Dependencies for the 'DatabaseConnector' Package
DatabionicSwarmSwarm Intelligence for Self-Organized Clustering
databraryrInteract with the 'Databrary.org' API
dataclassEasily Create Structured Lists or Data Frames with Input Validation
DataCleanData Cleaning
datacleanrInteractive and Reproducible Data Cleaning
DataCombineTools for Easily Combining and Cleaning Data Sets
dataCompareRCompare Two Data Frames and Summarise the Difference
datacutrSDTM Datacut
datadictionaryCreate a Data Dictionary
datadogrR Client for 'Datadog' API
datadriftRConcept Drift Detection Methods for Stream Data
DataEditRAn Interactive Editor for Viewing, Entering, Filtering & Editing Data
DataExplorerAutomate Data Exploration and Treatment
DataFakeRGenerate Fake Data for Relational Databases
dataframeexplorerFamiliarity with Dataframes Before Data Manipulation
datafsmEstimating Finite State Machine Models from Data
datagovsgRCall Real Time APIs from Data Gov Singapore
DataGraphExport Data from 'R' to 'DataGraph'
DataLoaderImport Multiple File Types
dataMaidA Suite of Checks for Identification of Potential Errors in a Data Frame as Part of the Data Screening Process
dataMetaCreate and Append a Data Dictionary for an R Dataset
DataMetProcessMeteorological Data Processing
datamodsModules to Import and Manipulate Data in 'Shiny'
dataMojoReshape Data Table
datanaData and Functions to Accompany Analisis De Datos Con R
datanuggetCreate, and Refine Data Nuggets
dataonderivativesEasily Source Publicly Available Data on Derivatives
dataoneR Interface to the DataONE REST API
datapackA Flexible Container to Transport and Manipulate Data and Associated Resources
DataPackageRConstruct Reproducible Analytic Data Sets as R Packages
datapastaR Tools for Data Copy-Pasta
dataprepEfficient and Flexible Data Preprocessing Tools
dataPreparationAutomated Data Preparation
dataquieRData Quality in Epidemiological Research
datardisData from the Doctor Who Series
dataReporterReproducible Data Screening Checks and Report of Possible Errors
dataresqcC3S Quality Control Tools for Historical Climate Data
dataRetrievalRetrieval Functions for USGS and EPA Hydrology and Water Quality Data
datariumData Bank for Statistical Analysis and Visualization
datarobot'DataRobot' Predictive Modeling API
datasailrRow by Row Data Processing Tool, Using 'DataSailr' Script
datasauRusDatasets from the Datasaurus Dozen
dataSDAData Sets for Symbolic Data Analysis
dataseriesSwitzerland's Data Series in One Place
datasetjsonRead and Write CDISC Dataset JSON Files
datasets.loadGraphical Interface for Loading Datasets
datasetsICRDatasets from the Book "An Introduction to Clustering with R"
DataSetsUniA Collection of Univariate Data Sets
DataSpaceRInterface to 'the CAVD DataSpace'
dataspiceCreate Lightweight Schema.org Descriptions of Data
DatAssimData Assimilation
datasteprAn Implementation of a SAS-Style Data Step
DatastreamDSWS2RProvides a Link Between the 'Refinitiv Datastream' System and R
DatastreamRDatastream API
DATAstudioThe Research Data Warehouse of Miguel de Carvalho
dataverifyrA Lightweight, Flexible, and Fast Data Validation Package that Can Handle All Sizes of Data
dataverseClient for Dataverse 4+ Repositories
DataVisualizationsVisualizations of High-Dimensional Data
DataVizData Visualisation Using an HTML Page and 'D3.js'
datawizardEasy Data Wrangling and Statistical Transformations
datazoom.amazoniaSimplify Access to Data from the Amazon Region
dateFunctions for Handling Dates
datebackCollect and Install R Packages on a Specified Date with Dependencies
datefixRStandardize Dates in Different Formats or with Missing Data
datelifeScientific Data on Time of Lineage Divergence for Your Taxa
daterangepickerCreate a Shiny Date-Range Input
datetimeNominal Dates, Times, and Durations
datetimeoffsetDatetimes with Optional UTC Offsets and/or Heterogeneous Time Zones
DateTimeRangePickerA Datetime Range Picker Widget for Usage in 'Shiny' Applications
datetimeutilsUtilities for Dates and Times
datetoisoModify Dates to ISO Standard ("International Organization for Standardization")
dateutilsDate Utils
datoramarInterface to the 'Datorama' API
datosTraduce al Español Varios Conjuntos de Datos de Práctica
datplotPreparation of Object Dating Ranges for Density Plots (Aoristic Analysis)
datr'Dat' Protocol Interface
datrProfileColumn Profile for Tables and Datasets
dauphinCompact Standard for Australian Phone Numbers
DaviesThe Davies Quantile Function
dawaiDiscriminant Analysis with Additional Information
daymetrInterface to the 'Daymet' Web Services
daySupplyCalculating Days' Supply and Daily Dose of Prescriptions
dbacfAutocovariance Estimation via Difference-Based Methods
dbartsDiscrete Bayesian Additive Regression Trees Sampler
dbcspDistance-Based Common Spatial Patterns
dbdDiscretised Beta Distribution
DBESTDetecting Breakpoints and Estimating Segments in Trend
DBfitA Double Bootstrap Method for Analyzing Linear Models with Autoregressive Errors
dbflobrRead and Write Files to SQLite Databases
dbGaPCheckupdbGaP Checkup
dbglmGeneralised Linear Models by Subsampling and One-Step Polishing
DBHCSequence Clustering with Discrete-Output HMMs
dbhydroR'DBHYDRO' Hydrologic and Water Quality Data
DBIR Database Interface
DBItestTesting DBI Backends
dblcensCompute the NPMLE of Distribution Function from Doubly Censored Data, Plus the Empirical Likelihood Ratio for F(T)
dBlockmodelingDeterministic Blockmodeling of Signed, One-Mode and Two-Mode Networks
dblrDiscrete Boosting Logistic Regression
dbMCConfidence Interval for Matrix Completion via De-Biased Estimator
DBModelSelectDistribution-Based Model Selection
dbmssDistance-Based Measures of Spatial Structures
dbnlearnDynamic Bayesian Network Structure Learning, Parameter Learning and Forecasting
DBNMFrankRank Selection for Non-Negative Matrix Factorization
dbnRDynamic Bayesian Network Learning and Inference
dbparserDrugs Databases Parser
dbplotSimplifies Plotting Data Inside Databases
dbplyrA 'dplyr' Back End for Databases
DBpowerFinite Sample Power Calculations for Detection Boundary Tests
DBRDiscrete Beta Regression
dbscanDensity-Based Spatial Clustering of Applications with Noise (DBSCAN) and Related Algorithms
dbstatsDistance-Based Statistics
DBTCDada-BLAST-Taxon Assign-Condense Metabarcode Analysis
DBTCShinyDada-BLAST-Taxon Assign-Condense Metabarcode Analysis 'shiny' Application
dbWebFormsProduce R Functions to Create HTML Forms Based on SQL Meta Data
dbxA Fast, Easy-to-Use Database Interface
dc3netInferring Condition-Specific Networks via Differential Network Inference
DCCADetrended Fluctuation and Detrended Cross-Correlation Analysis
DCchoiceAnalyzing Dichotomous Choice Contingent Valuation Data
dccmidasDCC Models with GARCH and GARCH-MIDAS Specifications in the Univariate Step, RiskMetrics, Moving Covariance and Scalar and Diagonal BEKK Models
dccppFast Computation of Distance Correlations
DCEMClustering Big Data using Expectation Maximization Star (EM*) Algorithm
DCEmgmtDCE Data Reshaping and Processing
DCEtoolEfficient and Accessible Discrete Choice Experiments
DCGData Cloud Geometry (DCG): Using Random Walks to Find Community Structure in Social Network Analysis
DChaosChaotic Time Series Analysis
dChipIOMethods for Reading dChip Files
dciferGenetic Relatedness Between Polyclonal Infections
DCLClaims Reserving under the Double Chain Ladder Model
DCLEARDistance Based Cell Lineage Reconstruction
dcloneData Cloning and MCMC Tools for Maximum Likelihood Methods
dclustDivisive Hierarchical Clustering
DClusterFunctions for the Detection of Spatial Clusters of Diseases
DClustermModel-Based Detection of Disease Clusters
dcm2Calculating the M2 Model Fit Statistic for Diagnostic Classification Models
dcmleHierarchical Models Made Easy with Data Cloning
dcmodifyModify Data Using Externally Defined Modification Rules
DCODEList Linear n-Peptide Constraints for Overlapping Protein Regions
dcortoolsProviding Fast and Flexible Functions for Distance Correlation Analysis
dcorVSVariable Selection Algorithms Using the Distance Correlation
dcovA Fast Implementation of Distance Covariance
dCovTSDistance Covariance and Correlation for Time Series Analysis
DCPODynamic Comparative Public Opinion
DCSmoothNonparametric Regression and Bandwidth Selection for Spatial Models
dcTensorDiscrete Matrix/Tensor Decomposition
dCURDimension Reduction with Dynamic CUR
dcurverUtility Functions for Davidian Curves
dcurvesDecision Curve Analysis for Model Evaluation
ddalphaDepth-Based Classification and Calculation of Data Depth
ddcDistance Density Clustering Algorithm
DDDDiversity-Dependent Diversification
ddeSolve Delay Differential Equations
ddecomposeDetailed Distributional Decomposition
DDHFmVariance Stabilization by Data-Driven Haar-Fisz (for Microarrays)
ddiThe Data Defect Index for Samples that May not be IID
ddivData Driven I-v Feature Extraction
DDLDoubly Debiased Lasso (DDL)
DDMDeath Registration Coverage Estimation
ddmlDouble/Debiased Machine Learning
DDoutlierDistance & Density-Based Outlier Detection
ddpDesirable Dietary Pattern
ddpcaDiagonally Dominant Principal Component Analysis
ddpcrAnalysis and Visualization of Droplet Digital PCR in R and on the Web
ddplotCreate D3 Based SVG Graphics
DDPMData Sets for Discrete Probability Models
DDPNADisease-Drived Differential Proteins Co-Expression Network Analysis
DDRTreeLearning Principal Graphs with DDRTree
ddsPLSData-Driven Sparse Partial Least Squares
ddstData Driven Smooth Tests
ddtlcmLatent Class Analysis with Dirichlet Diffusion Tree Process Prior
deadbandStatistical Deadband Algorithms Comparison
dealLearning Bayesian Networks with Mixed Variables
deaRConventional and Fuzzy Data Envelopment Analysis
debarA Post-Clustering Denoiser for COI-5P Barcode Data
DEBBIDifferential Evolution-Based Bayesian Inference
debestDuration Estimation for Biomarker Enrichment Studies and Trials
DebiasInferEfficient Inference on High-Dimensional Linear Model with Missing Outcomes
deBifBifurcation Analysis of Ordinary Differential Equation Systems
deBInferBayesian Inference for Differential Equations
debkeeprAnalysis of Non-Decimal Currencies and Double-Entry Bookkeeping
DeBoinRBox-Plots and Outlier Detection for Probability Density Functions
debugmeDebug R Packages
debugrDebug Tool to Watch Objects/Expressions While Running an R Script
DeCAFSDetecting Changes in Autocorrelated and Fluctuating Signals
DECIDEDEComposition of Indirect and Direct Effects
decidoBindings for 'Mapbox' Ear Cutting Triangulation Library
decisionStatistical Decision Analysis
decisionSupportQuantitative Support of Decision Making under Uncertainty
deckglAn R Interface to 'deck.gl'
declaredFunctions for Declared Missing Values
DeclareDesignDeclare and Diagnose Research Designs
decodeDifferential Co-Expression and Differential Expression Analysis
decoderDecode Coded Variables to Plain Text and the Other Way Around
decompDLDecomposition Based Deep Learning Models for Time Series Forecasting
decomposedPSFTime Series Prediction with PSF and Decomposition Methods (EMD and EEMD)
DecomposeREmpirical Mode Decomposition for Cyclostratigraphy
decomprGlobal Value Chain Decomposition
deconvolveREmpirical Bayes Estimation Strategies
decorRetrieve Code Decorations
DecorateRFit and Deploy DECORATE Trees
decoratorsExtend the Behaviour of a Function without Explicitly Modifying it
decpComplete Change Point Analysis
DeducerA Data Analysis GUI for R
deducorrectDeductive Correction, Deductive Imputation, and Deterministic Correction
deductiveData Correction and Imputation Using Deductive Methods
DeductiveRDeductive Rational Method
dedupedMaking "Deduplicated" Functions
dedupewiderDeduplication Across Multiple Columns
deepA Neural Networks Framework
deepdepVisualise and Explore the Deep Dependencies of R Packages
deepdiveDeep Learning for General Purpose
deepgmmDeep Gaussian Mixture Models
deepgpBayesian Deep Gaussian Processes using MCMC
DeepLearningCausalCausal Inference with Super Learner and Deep Neural Networks
deeplrInterface to the 'DeepL' Translation API
deepMOUClustering of Short Texts by Mixture of Unigrams and Its Deep Extensions
deepnetDeep Learning Toolkit in R
deepNNDeep Learning
deepredeffDeep Learning Prediction of Effectors
deepregressionFitting Deep Distributional Regression
deepRstudioSeamless Language Translation in 'RStudio' using 'DeepL' API and 'Rstudioapi'
deeptimePlotting Tools for Anyone Working in Deep Time
deeptrafoFitting Deep Conditional Transformation Models
DEETDifferential Expression Enrichment Tool
DEEVDDensity Estimation by Extreme Value Distributions
defaultChange the Default Arguments in R Functions
defineOptionsDefine and Parse Command Line Options
defineRCreates Define XML Documents
deFitFitting Differential Equations to Time Series Data
deflateBRDeflate Nominal Brazilian Reais
deflistDeferred List - A Read-Only List-Like Object with Deferred Access
deforestableClassify RGB Images into Forest or Non-Forest
deformSpatial Deformation and Dimension Expansion Gaussian Processes
deformulaIntegration of One-Dimensional Functions with Double Exponential Formulas
degdayCompute Degree Days
DEGREInferring Differentially Expressed Genes using Generalized Linear Mixed Models
degreenetModels for Skewed Count Distributions Relevant to Networks
degrossDensity Estimation from GROuped Summary Statistics
dejaVuMultiple Imputation for Recurrent Events
DelaporteStatistical Functions for the Delaporte Distribution
delayedA Framework for Parallelizing Dependent Tasks
DelayedEffect.DesignSample Size and Power Calculations using the APPLE, SEPPLE, APPLE+ and SEPPLE+ Methods
deldirDelaunay Triangulation and Dirichlet (Voronoi) Tessellation
DeltaMeasure of Agreement Between Two Raters
deltaccdQuantify Rhythmic Gene Co-Expression Relative to a Reference
DeltaMANDelta Measurement of Agreement for Nominal Data
deltaPlotRIdentification of Dichotomous Differential Item Functioning (DIF) using Angoff's Delta Plot Method
DELTDKernel Density Estimation using Lifetime Distributions
DEMThe Distributed EM Algorithms in Multivariate Gaussian Mixture Models
dematelDecision Making Trial and Evaluation Laboratory Technique in R
demicDynamic Estimator of Microbial Communities
demingDeming, Theil-Sen, Passing-Bablock and Total Least Squares Regression
DemoDecompDecompose Demographic Functions
demodelrSimulating Differential Equations with Data
demogRAnalysis of Age-Structured Demographic Models
DemografixeRExtrapolate Gender, Age and Nationality of a Name
demoGraphicProviding Demographic Table with the P-Value, Standardized Mean Difference Value
DemographicTableCreating Demographic Table
demographyForecasting Mortality, Fertility, Migration and Population Data
demoKdeKernel Density Estimation for Demonstration Purposes
DemoKinEstimate Population Kin Distribution
demoShinyRuns a 'Shiny' App as Demo or Lists All Demo 'Shiny' Apps
DEMOVADEvelopment (of Multi-Linear QSPR/QSAR) MOdels VAlidated using Test Set
demuOptimal Design Emulators via Point Processes
dendextendExtending 'dendrogram' Functionality in R
dendRoAnalystA Tool for Processing and Analyzing Dendrometer Data
dendroextrasExtra Functions to Cut, Label and Colour Dendrogram Clusters
dendrometryForest Estimations and Dendrometric Computations
dendroNetworkCreate Networks of Dendrochronological Series using Pairwise Similarity
DendroSyncA Set of Tools for Calculating Spatial Synchrony Between Tree-Ring Chronologies
dendroToolsLinear and Nonlinear Methods for Analyzing Daily and Monthly Dendroclimatological Data
DendSerDendrogram Seriation: Ordering for Visualisation
dendsortModular Leaf Ordering Methods for Dendrogram Nodes
denguedatahubA Tidy Format Datasets of Dengue by Country
denimGenerate and Simulate Deterministic Discrete-Time Compartmental Models
denoiSeqDifferential Expression Analysis Using a Bottom-Up Model
denoiseRRegularized Low Rank Matrix Estimation
denovolyzeRStatistical Analyses of De Novo Genetic Variants
denseFLMMFunctional Linear Mixed Models for Densely Sampled Data
densEstBayesDensity Estimation via Bayesian Inference Engines
densitrAnalysing Density Profiles from Resistance Drilling of Trees
densityareaPolygons of Bivariate Density Distributions
densityClustClustering by Fast Search and Find of Density Peaks
DensParcorrDens-Based Method for Partial Correlation Estimation in Large Scale Brain Networks
densratioDensity Ratio Estimation
denstripDensity Strips and Other Methods for Compactly Illustrating Distributions
denvaxSimple Dengue Test and Vaccinate Cost Thresholds
DEoptimGlobal Optimization by Differential Evolution
DEoptimRDifferential Evolution Optimization in Pure R
depcacheCache R Expressions, Taking Their Dependencies into Account
DepCensDependent Censoring Regression Models
depcoeffDependency Coefficients
depend.truncationStatistical Methods for the Analysis of Dependently Truncated Data
depignerA Utility Package to Help you Deal with "Pignas"
DepLogoDependency Logo
depmixDependent Mixture Models
depmixS4Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4
DEPONS2RRead, Plot and Analyse Output from the DEPONS Model
depsDependency Management with 'roxygen'-Style Comments
depth.plotMultivariate Analogy of Quantiles
DepthProcStatistical Depth Functions for Multivariate Analysis
depthToolsDepth Tools Package
DeRezende.FerreiraZero Coupon Yield Curve Modelling
DerivSymbolic Differentiation
derivmktsFunctions and R Code to Accompany Derivatives Markets
DESDiscrete Event Simulation
descManipulate DESCRIPTION Files
descomponerSeasonal Adjustment by Frequency Analysis
descrDescriptive Statistics
describedataMiscellaneous Descriptive Functions
DescribeDFDescription of a Data Frame
DescribeDisplayAn Interface to the 'DescribeDisplay' 'GGobi' Plugin
describerDescribe Data in R Using Common Descriptive Statistics
descriptioDescriptive Statistical Analysis
DescriptiveRepresentationCalculatorDescriptive Representation Calculator: Characterizing Observed and Expected Representation
DescriptiveStats.OBeuDescriptive Statistics 'OpenBudgets.eu'
DescriptiveWHDescriptive Statistics
descriptrGenerate Descriptive Statistics
DescrTab2Publication Quality Descriptive Statistics Tables
descstatTools for Descriptive Statistics
descstatsrDescriptive Univariate Statistics
desctableProduce Descriptive and Comparative Tables Easily
DescToolsTools for Descriptive Statistics
DescToolsAddInsInteractive Functions to be Used as Shortcuts in 'RStudio'
deseatsData-Driven Locally Weighted Regression for Trend and Seasonality in TS
Design.parametersParameters of the Experimental Designs
DesignCTPBDesign Clinical Trials with Potential Biomarker Effect
designer'Shiny' UI Prototype Builder
designitBlocking and Randomization for Experimental Design
DesignLibraryLibrary of Research Designs
designmatchMatched Samples that are Balanced and Representative by Design
designrBalanced Factorial Designs
designsizeSample Size Calculation of Various Study Designs
desiRDesirability Functions for Ranking, Selecting, and Integrating Data
desirabilityFunction Optimization and Ranking via Desirability Functions
desirability2Desirability Functions for Multiparameter Optimization
deskDidactic Econometrics Starter Kit
deslaDesparsified Lasso Inference for Time Series
deSolveSolvers for Initial Value Problems of Differential Equations ('ODE', 'DAE', 'DDE')
desplotPlotting Field Plans for Agricultural Experiments
detailsCreate Details HTML Tag for Markdown and Package Documentation
detectAnalyzing Wildlife Data with Detection Error
detectnormDetect Nonnormality in Meta-Analysis without Raw Data
detectorDetect Data Containing Personally Identifiable Information
detectorsPrediction Data from GPT Detectors
detectRChange Point Detection
detectRUNSDetect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes
detectseparationDetect and Check for Separation and Infinite Maximum Likelihood Estimates
DetLifeInsuranceLife Insurance Premium and Reserves Valuation
DetMCDImplementation of the DetMCD Algorithm (Robust and Deterministic Estimation of Location and Scatter)
detourrPortable and Performant Tour Animations
detpackDensity Estimation and Random Number Generation with Distribution Element Trees
DetRSuite of Deterministic and Robust Algorithms for Linear Regression
detrendeRA Graphical User Interface (GUI) to Visualize and Analyze Dendrochronological Data
detrendrDetrend Images
deTSTissue-Specific Enrichment Analysis
detzrcrCompare Detrital Zircon Suites
devEMFEMF Graphics Output Device
devFuncClear and Condense Argument Check for User-Defined Functions
devoidA Graphic Device that Does Nothing
Devore7Data sets from Devore's "Prob and Stat for Eng (7th ed)"
devRateQuantify the Relationship Between Development Rate and Temperature in Ectotherms
devtoolsTools to Make Developing R Packages Easier
DevTreatRulesDevelop Treatment Rules with Observational Data
dexterData Management and Analysis of Tests
dexterguiA Graphical User Interface for Dexter
dexterMSTCML and Bayesian Calibration of Multistage Tests
df2yamlConvert Dataframe to 'YAML'
DFADetrended Fluctuation Analysis
DFA.CANCORLinear Discriminant Function and Canonical Correlation Analysis
dfadjustDegrees of Freedom Adjustment for Robust Standard Errors
DFBADistribution-Free Bayesian Analysis
dfcombPhase I/II Adaptive Dose-Finding Design for Combination Studies
dfCompareCompare Two Dataframes and Return Adds, Changes, and Deletes
dfcrmDose-Finding by the Continual Reassessment Method
DFDExtract Drugs from Differential Expression Data from LINCS Database
dfdrAutomatic Differentiation of Simple Functions
dfexpandAutomatically Expand Delimited Column Values into Multiple Binary Columns with 'dfexpand'
dfidxIndexed Data Frames
DFITDifferential Functioning of Items and Tests
dfmetaMeta-Analysis of Phase I Dose-Finding Early Clinical Trials
dfmirroRSimulate a Data Frame Mirroring an Input and Produce Shareable Simulation Code
dfmsDynamic Factor Models
dfmtaPhase I/II Adaptive Dose-Finding Design for MTA
dfoliatRDetection and Analysis of Insect Defoliation Signals in Tree Rings
dfoptimDerivative-Free Optimization
DforestDecision Forest
dformulaData Manipulation using Formula
dfpedExtrapolation and Bridging of Adult Information in Early Phase Dose-Finding Paediatrics Studies
dfphase1Phase I Control Charts (with Emphasis on Distribution-Free Methods)
dfrrDichotomized Functional Response Regression
dfsaneaccAccelerated Derivative-Free Method for Large-Scale Nonlinear Systems of Equations
dfvadDiewert and Fox's Method of Value Added Growth Decomposition
dgaCapture-Recapture Estimation using Bayesian Model Averaging
dGAselIDGenetic Algorithm with Incomplete Dominance for Feature Selection
DGEARDifferential Gene Expression Analysis with R
DGEobjDifferential Gene Expression (DGE) Analysis Results Data Object
DGEobj.utilsDifferential Gene Expression (DGE) Analysis Utility Toolkit
dggridRDiscrete Global Grids
dglarsDifferential Geometric Least Angle Regression
dglmDouble Generalized Linear Models
DGLMExtPoisDouble Generalized Linear Models Extending Poisson Regression
DGMDynamic Graphical Models
dgofDiscrete Goodness-of-Fit Tests
DGP4LCFDependent Gaussian Processes for Longitudinal Correlated Factors
dgpsiInterface to 'dgpsi' for Deep and Linked Gaussian Process Emulations
dgumbelThe Gumbel Distribution Functions and Gradients
DHARMaResidual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models
DHBinsHexmaps for NZ District Health Boards
dhgaDifferential Hub Gene Analysis
dhglmDouble Hierarchical Generalized Linear Models
dhhA Heavy-Headed Distribution
dhlabRNational Library of Norway Quantitative Text Data API Tools
DHS.ratesCalculates Demographic Indicators
dhsageReproductive Age Female Data of Various Demographic Health Surveys
dHSICIndependence Testing via Hilbert Schmidt Independence Criterion
diDeficit Index (DI)
diagisDiagnostic Plot and Multivariate Summary Statistics of Weighted Samples from Importance Sampling
diagL1Routines for Fit, Inference and Diagnostics in Linear L1 and LAD Models
diagmetaMeta-Analysis of Diagnostic Accuracy Studies with Several Cutpoints
diagonalsBlock Diagonal Extraction or Replacement
diagramFunctions for Visualising Simple Graphs (Networks), Plotting Flow Diagrams
DiagrammeRGraph/Network Visualization
DiagrammeRsvgExport DiagrammeR Graphviz Graphs as SVG
DiallelAnalysisRDiallel Analysis with R
dialrParse, Format, and Validate International Phone Numbers
dialrjarsRequired 'libphonenumber' jars for the 'dialr' Package
dialsTools for Creating Tuning Parameter Values
diapltBeads Summary Plot of Ranges
diathorCalculate Ecological Information and Diatom Based Indices
dibbleDimensional Data Frames
diceCalculate probabilities of various dice-rolling events
DiceDesignDesigns of Computer Experiments
DiceEvalConstruction and Evaluation of Metamodels
DiceKrigingKriging Methods for Computer Experiments
DiceOptimKriging-Based Optimization for Computer Experiments
diceRDiverse Cluster Ensemble in R
DiceViewMethods for Visualization of Computer Experiments Design and Surrogate
dichromatColor Schemes for Dichromats
DICOMreadReading and Saving DICOM Image Files
DIconvexFinding Patterns of Monotonicity and Convexity in Data
DictR6 Based Key-Value Dictionary Implementation
dictionar6R6 Dictionary Interface
dictionaRyRetrieve the Dictionary Definitions of English Words
didTreatment Effects with Multiple Periods and Groups
did2sTwo-Stage Difference-in-Differences Following Gardner (2021)
DidacticBoostA Simple Implementation and Demonstration of Gradient Boosting
DiderotBibliographic Network Analysis
DiDforBigDataA Big Data Implementation of Difference-in-Differences Estimation with Staggered Treatment
DIDHADDifference-in-Differences in Heterogeneous Adoption Designs with Quasi Stayers
didimputationImputation Estimator from Borusyak, Jaravel, and Spiess (2021)
DIDmultiplegtEstimators DID with Multiple Groups and Periods
DIDmultiplegtDYNEstimation in Difference-in-Difference Designs with Multiple Groups and Periods
didrooRFMCompute Recency Frequency Monetary Scores for your Customer Data
diemrDiagnostic Index Expectation Maximisation in R
dietrDiet Estimated Trophic Levels
diezeitR Interface to the ZEIT ONLINE Content API
DIFboostDetection of Differential Item Functioning (DIF) in Rasch Models by Boosting Techniques
difconetDifferential Coexpressed Networks
diffcorFisher's z-Tests Concerning Differences Between Correlations
DiffCorrAnalyzing and Visualizing Differential Correlation Networks in Biological Data
diffdfDataframe Difference Tool
diffdfsCompute the Difference Between Data Frames
diffeeFast and Scalable Learning of Sparse Changes in High-Dimensional Gaussian Graphical Model Structure
diffEnrichGiven a List of Gene Symbols, Performs Differential Enrichment Analysis
diffeqrSolving Differential Equations (ODEs, SDEs, DDEs, DAEs)
diffeRMetrics of Difference for Comparing Pairs of Maps or Pairs of Variables
diffeRenTESComputation of TES-Based Cell Differentiation Trees
diffIRTDiffusion IRT Models for Response and Response Time Data
diffmatchpatchString Diff, Match, and Patch Utilities
DiffNetIdentifying Significant Node Scores using Network Diffusion Algorithm
diffobjDiffs for R Objects
diffprivEasy Differential Privacy
diffrDisplay Differences Between Two Files using Codediff Library
diffudistDiffusion Distance for Complex Networks
diffusionForecast the Diffusion of New Products
diffusionMapDiffusion Map
diffvalVegetation Patterns
diffviewerHTML Widget to Show File Differences
DiffXTablesPattern Analysis Across Contingency Tables
DIFlassoA Penalty Approach to Differential Item Functioning in Rasch Models
DIFMDynamic ICAR Spatiotemporal Factor Models
difNLRDIF and DDF Detection by Non-Linear Regression Models
DIFplusMultilevel Mantel-Haenszel Statistics for Differential Item Functioning Detection
difRCollection of Methods to Detect Dichotomous Differential Item Functioning (DIF)
DIFshinyDifferential Item Functioning via Shiny Application
DIFtreeItem Focussed Trees for the Identification of Items in Differential Item Functioning
digestCreate Compact Hash Digests of R Objects
digiRhythmAnalyzing Animal's Rhythmicity
digitalDLSorteRDeconvolution of Bulk RNA-Seq Data Based on Deep Learning
digitalPCREstimate Copy Number for Digital PCR
digitizeUse Data from Published Plots in R
digitTestsTests for Detecting Irregular Digit Patterns
DIGSSDetermination of Intervals Using Georeferenced Survey Simulation
dilpReconstruct Paleoclimate and Paleoecology with Leaf Physiognomy
DIMEDifferential Identification using Mixture Ensemble
dimensioMultivariate Data Analysis
dimensionsRGathering Bibliographic Records from 'Digital Science Dimensions' Using 'DSL' API
DImodelsDiversity-Interactions (DI) Models
DImodelsMultiFit Multivariate Diversity-Interactions Models with Repeated Measures
DImodelsVisVisualising and Interpreting Statistical Models Fit to Compositional Data
DIMORADiffusion Models R Analysis
dimRedA Framework for Dimensionality Reduction
dinaBayesian Estimation of DINA Model
dinamicA Method to Analyze Recurrent DNA Copy Number Aberrations in Tumors
DiNAMIC.DuoFinding Recurrent DNA Copy Number Alterations and Differences
dineqDecomposition of (Income) Inequality
dineRDifferential Network Estimation in R
dintA Toolkit for Year-Quarter, Year-Month and Year-Isoweek Dates
DiPALMDifferential Pattern Analysis via Linear Modeling
DiPhiSeqRobust Tests for Differential Dispersion and Differential Expression in RNA-Sequencing Data
dipmDepth Importance in Precision Medicine (DIPM) Method
dipropermConduct Direction-Projection-Permutation Tests and Display Plots
DiPsDirectional Penalties for Optimal Matching in Observational Studies
dipsausA Dipping Sauce for Data Analysis and Visualizations
diptestHartigan's Dip Test Statistic for Unimodality - Corrected
dipwDebiased Inverse Propensity Score Weighting
DireLinear Regressions with a Latent Outcome Variable
DIRECTBayesian Clustering of Multivariate Data Under the Dirichlet-Process Prior
DirectedClusteringDirected Weighted Clustering Coefficient
DirectEffectsEstimating Controlled Direct Effects for Explaining Causal Findings
DirectionalA Collection of Functions for Directional Data Analysis
directlabelsDirect Labels for Multicolor Plots
directotreeCreates an Interactive Tree Structure of a Directory
directPADirection Analysis for Pathways and Kinases
DirectStandardisationAdjusted Means and Proportions by Direct Standardisation
dirichletprocessBuild Dirichlet Process Objects for Bayesian Modelling
DirichletRegDirichlet Regression
dirmcmcDirectional Metropolis Hastings Algorithm
dirmultEstimation in Dirichlet-Multinomial Distribution
DirStatsNonparametric Methods for Directional Data
dirtteeDistributional Regression for Time to Event Data
disaggRTwo-Steps Benchmarks for Time Series Disaggregation
DisaggregateTSHigh-Dimensional Temporal Disaggregation
disaggregationDisaggregation Modelling
disastr.apiWrapper for the UN OCHA ReliefWeb Disaster Events API
disbayesBayesian Multi-State Modelling of Chronic Disease Burden Data
discAUCLinear and Non-Linear AUC for Discounting Data
DIscBIOA User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics
discFADiscrete Factor Analysis
discfrailCox Models for Time-to-Event Data with Nonparametric Discrete Group-Specific Frailties
dischargeFourier Analysis of Discharge Data
disclapDiscrete Laplace Exponential Family
disclapmixDiscrete Laplace Mixture Inference using the EM Algorithm
disclapmix2Mixtures of Discrete Laplace Distributions using Numerical Optimisation
disclosuRText Conversion from Nexis Uni PDFs to R Data Frames
discnormTest for Discretized Normality in Ordinal Data
discordFunctions for Discordant Kinship Modeling
DiSCosDistributional Synthetic Controls Estimation
discourseGTAnalyze Group Patterns using Graph Theory in Educational Settings
discoveRExploratory Data Analysis System
discoverableresearchChecks Title, Abstract and Keywords to Optimise Discoverability
DiscreteDatasetsExample Data Sets for Use with Discrete Statistical Tests
DiscreteFDRFDR Based Multiple Testing Procedures with Adaptation for Discrete Tests
discretefitSimulated Goodness-of-Fit Tests for Discrete Distributions
DiscreteInverseWeibullDiscrete Inverse Weibull Distribution
DiscreteLaplaceDiscrete Laplace Distributions
DiscreteQvalueImproved q-Values for Discrete Uniform and Homogeneous Tests
DiscreteTestsVectorised Computation of P-Values and Their Supports for Several Discrete Statistical Tests
DiscreteWeibullDiscrete Weibull Distributions (Type 1 and 3)
discretizationData Preprocessing, Discretization for Classification
discrimModel Wrappers for Discriminant Analysis
discrtrA Companion Package for the Book "Discrete Choice Analysis with 'R'"
discSurvDiscrete Time Survival Analysis
discursiveMeasuring Discursive Sophistication in Open-Ended Survey Responses
disdatData for Comparing Species Distribution Modeling Methods
diseasemappingModelling Spatial Variation in Disease Risk for Areal Data
diseasystoreFeature Stores for the 'diseasy' Framework
DisHetEstimate the Gene Expression Levels and Component Proportions of the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor Samples
DisimForMixedCalculate Dissimilarity Matrix for Dataset with Mixed Attributes
DisImpactCalculates Disproportionate Impact When Binary Success Data are Disaggregated by Subgroups
disk.frameLarger-than-RAM Disk-Based Data Manipulation Framework
dismoSpecies Distribution Modeling
disordRNon-Ordered Vectors
disparityfilterDisparity Filter Algorithm for Weighted Networks
dispeRseSimulation of Demic Diffusion with Environmental Constraints
dispmodModelling Dispersion in GLM
disposablesCreate Disposable R Packages for Testing
dispositionEffectAnalysis of Disposition Effect on Financial Portfolios
dispRityMeasuring Disparity
disprofasNon-Parametric Dissolution Profile Analysis
disproseDiscriminating Probes Selection
dissCqNMultiple Assemblage Dissimilarity for Orders q = 0-N
disseverSpatial Downscaling using the Dissever Algorithm
DiSSModFitting Sample Selection Models for Discrete Response Variables
DistanceDistance Sampling Detection Function and Abundance Estimation
distancesTools for Distance Metrics
distancetoCalculate Distance to Features
distantiaAssessing Dissimilarity Between Multivariate Time Series
DistatisRDiSTATIS Three Way Metric Multidimensional Scaling
distcompComputations over Distributed Data without Aggregation
distcreteDiscrete Distribution Approximations
distdichoRDistributional Method for the Dichotomisation of Continuous Outcomes
distfree.crDistribution-Free Confidence Region
distill'R Markdown' Format for Scientific and Technical Writing
distilleryMethod Functions for Confidence Intervals and to Distill Information from an Object
distillMLModel Distillation and Interpretability Methods for Machine Learning Models
distinctivenessDistinctiveness Centrality
distoUnified Interface to Distance, Dissimilarity, Similarity Matrices
distopsUsual Operations for Distance Matrices in R
distoryDistance Between Phylogenetic Histories
DistPlotterA Graphical User Interface for Plotting Common Univariate Distributions
distrObject Oriented Implementation of Distributions
distrDocDocumentation for 'distr' Family of R Packages
distreg.visFramework for the Visualization of Distributional Regression Models
distrEllipseS4 Classes for Elliptically Contoured Distributions
distrExExtensions of Package 'distr'
DISTRIBFour Essential Functions for Statistical Distributions Analysis: A New Functional Approach
DistributacalculProbability Distribution Functions
distributionalVectorised Probability Distributions
DistributionOptimizationDistribution Optimization
distributions3Probability Distributions as S3 Objects
distributionsrdDistribution Fitting and Evaluation
DistributionTestPowerful Goodness-of-Fit Tests Based on the Likelihood Ratio
DistributionUtilsDistribution Utilities
distrModObject Oriented Implementation of Probability Models
distroLinux Distribution Properties
distromDistributed Multinomial Regression
distrrEstimate and Manage Empirical Distributions
distrRmetricsDistribution Classes for Distributions from Rmetrics
distrSimSimulation Classes Based on Package 'distr'
distrTeachExtensions of Package 'distr' for Teaching Stochastics/Statistics in Secondary School
distrTEstEstimation and Testing Classes Based on Package 'distr'
distTailsA Collection of Full Defined Distribution Tails
disttoolsDistance Object Manipulation Tools
dittodbA Test Environment for Database Requests
dittoVizUser Friendly Data Visualization
divReport on Diversity and Inclusion in a Corporate Setting
divDynDiversity Dynamics using Fossil Sampling Data
DivEDiversity Estimator
diveMoveDive Analysis and Calibration
diveREasily Install and Load Interactive Data Visualization Tools
divergeEvolutionary Trait Divergence Between Sister Species and Other Paired Lineages
diverseDiversity Measures for Complex Systems
DiversificationREconometric Tools to Measure Portfolio Diversification
diversitreeComparative 'Phylogenetic' Analyses of Diversification
diversityForestInnovative Complex Split Procedures in Random Forests Through Candidate Split Sampling
divestGet Images Out of DICOM Format Quickly
divoTools for Analysis of Diversity and Similarity in Biological Systems
divrasterDiversity Metrics Calculations for Rasterized Data
divsegCalculate Diversity and Segregation Indices
divvySpatial Subsampling of Biodiversity Occurrence Data
dixonNearest Neighbour Contingency Table Analysis
dixonTestDixon's Ratio Test for Outlier Detection
diyarRecord Linkage and Epidemiological Case Definitions in 'R'
DIZtoolsLightweight Utilities for 'DIZ' R Package Development
DIZutilsUtilities for 'DIZ' R Package Development
DJLDistance Measure Based Judgment and Learning
dkanrClient for the 'DKAN' API
dLagMTime Series Regression Models with Distributed Lag Models
DLASSOImplementation of Adaptive or Non-Adaptive Differentiable Lasso and SCAD Penalties in Linear Models
dlbayesUse Dirichlet Laplace Prior to Solve Linear Regression Problem and Do Variable Selection
DLEGFMDistributed Loading Estimation for General Factor Model
dlibAllow Access to the 'Dlib' C++ Library
dlimDistributed Lag Interaction Model
DLLDecorrelated Local Linear Estimator
dlmBayesian and Likelihood Analysis of Dynamic Linear Models
DLMtoolData-Limited Methods Toolkit
dlmtreeBayesian Treed Distributed Lag Models
dlnmDistributed Lag Non-Linear Models
dlookrTools for Data Diagnosis, Exploration, Transformation
DLPCAThe Distributed Local PCA Algorithm
dlrDownload and Cache Files Safely
dlsemDistributed-Lag Linear Structural Equation Models
dlstatsDownload Stats of R Packages
dmRelational Data Models
dmaDynamic Model Averaging
dmaiDivisia Monetary Aggregates Index
dmbcModel Based Clustering of Binary Dissimilarity Measurements
dmetatoolsComputational Tools for Meta-Analysis of Diagnostic Accuracy Test
dmlDistance Metric Learning in R
dmlalgDouble Machine Learning Algorithms
dmmDyadic Mixed Model for Pedigree Data
DMMFDaily Based Morgan-Morgan-Finney (DMMF) Soil Erosion Model
dModDynamic Modeling and Parameter Estimation in ODE Models
DMQDynamic Multiple Quantile (DMQ) Model
dmri.trackingDiST - Diffusion Direction Smoothing and Tracking
DMRnetDelete or Merge Regressors Algorithms for Linear and Logistic Model Selection and High-Dimensional Data
DMtestDifferential Methylation Tests (DMtest)
DMTLTools for Applying Distribution Mapping Based Transfer Learning
dmtoolsTools for Clinical Data Management
dmutateMutate Data Frames with Random Variates
DMwR2Functions and Data for the Second Edition of "Data Mining with R"
DNAmixturesLiteStatistical Inference for Mixed Traces of DNA (Lite-Version)
DNAmotifDNA Sequence Motifs
DNAseqtestGenerating and Testing DNA Sequences
DNAtoolsTools for Analysing Forensic Genetic DNA Data
dndRDungeons & Dragons Functions for Players and Dungeon Masters
DNetFinderEstimating Differential Networks under Semiparametric Gaussian Graphical Models
dngDistributions and Gradients
DNH4Crawling for Daum News Text
DNLCDifferential Network Local Consistency Analysis
DNMFDiscriminant Non-Negative Matrix Factorization
dnnDeep Neural Network Tools for Probability and Statistic Models
dnrSimulate Dynamic Networks using Exponential Random Graph Models (ERGM) Family
doData Operator
dobinDimension Reduction for Outlier Detection
dobsonData from the GLM Book by Dobson and Barnett
doByGroupwise Statistics, LSmeans, Linear Estimates, Utilities
doc2concreteMeasuring Concreteness in Natural Language
doc2vecDistributed Representations of Sentences, Documents and Topics
dockerfilerEasy Dockerfile Creation from R
DockerParallelUsing the Docker Container to Create R Workers on Local or Cloud Platform
docketInsert R Data into 'Word' Documents
docknitrUse Docker Images to Process Rmarkdown Blocks
doconvDocument Conversion to 'PDF' or 'PNG'
docoptCommand-Line Interface Specification Language
docopulaeOptimal Designs for Copula Models
docoreUtility Functions for Scientific Coding
docstringProvides Docstring Capabilities to R Functions
doctestGenerate Tests from Examples Using 'roxygen' and 'testthat'
documentRun 'roxygen2' on (Chunks of) Single Code Files
documenterDocuments Files
docuSignrConnect to 'DocuSign' API
docxtractrExtract Data Tables and Comments from 'Microsoft' 'Word' Documents
DodgeAcceptance Sampling Ideas Originated by H.F. Dodge
dodgrDistances on Directed Graphs
DoE.baseFull Factorials, Orthogonal Arrays and Base Utilities for DoE Packages
DoE.MIParrayCreation of Arrays by Mixed Integer Programming
DoE.wrapperWrapper Package for Design of Experiments Functionality
doebioresearchAnalysis of Design of Experiments for Biological Research
DOEMThe Distributed Online Expectation Maximization Algorithms to Solve Parameters of Poisson Mixture Models
DoEstRareRare Variant Association Test Based on Position Density Estimation
doexThe One-Way Heteroscedastic ANOVA Tests
doFutureUse Foreach to Parallelize via the Future Framework
dogesrWork with the Doges/Dogaresse Dataset
doMCForeach Parallel Adaptor for 'parallel'
dominanceanalysisDominance Analysis
dominoR Console Bindings for the 'Domino Command-Line Client'
DominoDataR'Domino Data R SDK'
domirTools to Support Relative Importance Analysis
doMPIForeach Parallel Adaptor for the Rmpi Package
donutNearest Neighbour Search with Variables on a Torus
donutskConstruct Advanced Donut Charts
doofaDesigns for Order-of-Addition Experiments
doolkitExploration of Dental Surface Topography
doParallelForeach Parallel Adaptor for the 'parallel' Package
DOPEDrug Ontology Parsing Engine
doRedis'Foreach' Parallel Adapter Using the 'Redis' Database
doremiDynamics of Return to Equilibrium During Multiple Inputs
doRNGGeneric Reproducible Parallel Backend for 'foreach' Loops
DOSDesign of Observational Studies
DOS2Design of Observational Studies, Companion to the Second Edition
dosearchCausal Effect Identification from Multiple Incomplete Data Sources
dosedesignRInteractive Designing of Dose Finding Studies
DoseFindingPlanning and Analyzing Dose Finding Experiments
doseminerExtract Drug Dosages from Free-Text Prescriptions
doseSensConduct Sensitivity Analysis with Continuous Exposures and Binary Outcomes
doSNOWForeach Parallel Adaptor for the 'snow' Package
DOSPortfolioDynamic Optimal Shrinkage Portfolio
dosresmetaMultivariate Dose-Response Meta-Analysis
dostatsCompute Statistics Helper Functions
DOTRender and Export DOT Graphs in R
dotCall64Enhanced Foreign Function Interface Supporting Long Vectors
dotenvLoad Environment Variables from '.env'
dotgenGene-Set Analysis via Decorrelation by Orthogonal Transformation
dotprofileCreate and Manage Configuration Profiles
dotsDot Density Maps
dotsViolinDot Plots Mimicking Violin Plots
dotwhiskerDot-and-Whisker Plots of Regression Results
doubcensSurvivor Function Estimation for Doubly Interval-Censored Failure Time Data
double.truncationAnalysis of Doubly-Truncated Data
DoubleConeTest Against Parametric Regression Function
DoubleExpSeqDifferential Exon Usage Test for RNA-Seq Data via Empirical Bayes Shrinkage of the Dispersion Parameter
DoubleMLDouble Machine Learning in R
doublInEstimate Incubation or Latency Time using Doubly Interval Censored Observations
doubtEnable Operators Containing the '?' Symbol
doudpackageCreate Elegant Table 1 in HTML for Bio-Statistics
DOvalidationKernel Hazard Estimation with Best One-Sided and Double One-Sided Cross-Validation
DOVEDurability of Vaccine Efficacy
DowdFunctions Ported from 'MMR2' Toolbox Offered in Kevin Dowd's Book Measuring Market Risk
downlitSyntax Highlighting and Automatic Linking
downloaderDownload Files over HTTP and HTTPS
downloadthisImplement Download Buttons in 'rmarkdown'
downscaleDownscaling Species Occupancy
downsizeA Tool to Downsize Large Analysis Projects for Testing
dowserB Cell Receptor Phylogenetics Toolkit
DOYPAColorsDon't Overthink Your Palette of Colors
dparserPort of 'Dparser' Package
DPBBMDirichlet Process Beta-Binomial Mixture
dpccDynamic Programming for Convex Clustering
dPCPAutomated Analysis of Multiplex Digital PCR Data
DpitDistribution Pitting
dplRDendrochronology Program Library in R
dplyrA Grammar of Data Manipulation
dplyrAssistRStudio Addin for Teaching and Learning Data Manipulation Using 'dplyr'
dpmDynamic Panel Models Fit with Maximum Likelihood
dpmrData Package Manager for R
DPPInference of Parameters of Normal Distributions from a Mixture of Normals
DPpackDifferentially Private Statistical Analysis and Machine Learning
dppmixDeterminantal Point Process Mixture Models
DPQDensity, Probability, Quantile ('DPQ') Computations
DPQmpfrDPQ (Density, Probability, Quantile) Distribution Computations using MPFR
dpropComputation of Some Important Distributional Properties
dpsegPiecewise Linear Segmentation by Dynamic Programming
DPTMDynamic Panel Multiple Threshold Model with Fixed Effects
DPtreeDirichlet-Based Polya Tree
DQAguiGraphical User Interface for Data Quality Assessment
DQAstatsCore Functions for Data Quality Assessment
dqrngFast Pseudo Random Number Generators
dQTG.seqA BSA Software for Detecting All Types of QTLs in BC, DH, RIL and F2
drMethods for Dimension Reduction for Regression
DR.SCJoint Dimension Reduction and Spatial Clustering
dr4plDose Response Data Analysis using the 4 Parameter Logistic (4pl) Model
dracorDecode Draco Format 3D Mesh Data
dragonkingStatistical Tools to Identify Dragon Kings
dragracerData Sets for RuPaul's Drag Race
dragulaRDrag and Drop Elements in 'Shiny' using 'Dragula Javascript Library'
drakeA Pipeline Toolkit for Reproducible Computation at Scale
DramaAnalysisAnalysis of Dramatic Texts
drapeDoubly Robust Average Partial Effects
drat'Drat' R Archive Template
drawWrapper Functions for Producing Graphics
drawerAn Interactive HTML Image Editing Tool
DRaWRDiscriminative Random Walk with Restart
drawsampleDraw Samples with the Desired Properties from a Data Set
DRAYLComputation of Rayleigh Densities of Arbitrary Dimension
DrBatsData Representation: Bayesian Approach That's Sparse
drcAnalysis of Dose-Response Curves
drcarlateImproving Estimation Efficiency in CAR with Imperfect Compliance
drclustSimultaneous Clustering and (or) Dimensionality Reduction
drcSeedGermUtilities for Data Analyses in Seed Germination/Emergence Assays
drcteStatistical Approaches for Time-to-Event Data in Agriculture
drdaDose-Response Data Analysis
DRDIDDoubly Robust Difference-in-Differences Estimators
DrDimontDrug Response Prediction from Differential Multi-Omics Networks
DRDRtestA Nonparametric Doubly Robust Test for Continuous Treatment Effect
dreamerDose Response Models for Bayesian Model Averaging
dreamerrError Handling Made Easy
DREGARRegularized Estimation of Dynamic Linear Regression in the Presence of Autocorrelated Residuals (DREGAR)
drfDistributional Random Forests
drgeeDoubly Robust Generalized Estimating Equations
drglmFitting Linear and Generalized Linear Models in "Divide and Recombine" Approach to Large Data Sets
DRHotNetDifferential Risk Hotspots in a Linear Network
drhurLearning R with Dr. Hu
DriftBurstHypothesisCalculates the Test-Statistic for the Drift Burst Hypothesis
drifterConcept Drift and Concept Shift Detection for Predictive Models
DrillRR Driver for Apache Drill
drimmREstimation, Simulation and Reliability of Drifting Markov Models
DrImputeImputing Dropout Events in Single-Cell RNA-Sequencing Data
DRIPDiscontinuous Regression and Image Processing
driveRPrioritizing Cancer Driver Genes Using Genomics Data
drollAnalyze Roll Distributions
DRomicsDose Response for Omics
dropoutHandling Incomplete Responses in Survey Data Analysis
dropRDropout Analysis by Condition
droptestSimulates LOX Drop Testing
drordDoubly-Robust Estimators for Ordinal Outcomes
droughtStatistical Modeling and Assessment of Drought
drpopEfficient and Doubly Robust Population Size Estimation
DRqualityQuality Measurements for Dimensionality Reduction
DRRDimensionality Reduction via Regression
drtmleDoubly-Robust Nonparametric Estimation and Inference
drugDemandDrug Demand Forecasting
drugdevelopRUtility-Based Optimal Phase II/III Drug Development Planning
DrugExposureDiagnosticsDiagnostics for OMOP Common Data Model Drug Records
drugpreprPrepare Electronic Prescription Record Data to Estimate Drug Exposure
DrugSim2DRPredict Drug Functional Similarity to Drug Repurposing
DrugUtilisationSummarise Patient-Level Drug Utilisation in Data Mapped to the OMOP Common Data Model
drumrTurn R into a Drum Machine
DRviaSPCNDrug Repurposing in Cancer via a Subpathway Crosstalk Network
dsDescriptive Statistics
ds4psyData Science for Psychologists
dsaSeasonal Adjustment of Daily Time Series
DSAIDEDynamical Systems Approach to Infectious Disease Epidemiology (Ecology/Evolution)
DSAIRMDynamical Systems Approach to Immune Response Modeling
DSAMData Splitting Algorithms for Model Developments
dsampleDiscretization-Based Direct Random Sample Generation
dsbNormalize & Denoise Droplet Single Cell Protein Data (CITE-Seq)
DSBayesBayesian Subgroup Analysis in Clinical Trials
dscoreD-Score for Child Development
dsdpDensity Estimation with Semidefinite Programming
dsemFit Dynamic Structural Equation Models
DSI'DataSHIELD' Interface
dsimsDistance Sampling Simulations
DSjobtrackerWhat Skills and Qualifications are Required for Data Science Related Jobs?
DSLDistributed Storage and List
dslabsData Science Labs
dsliceDynamic Slicing
DSLite'DataSHIELD' Implementation on Local Datasets
dsmDensity Surface Modelling of Distance Sampling Data
dsmiscData Science Box of Pandora Miscellaneous
dsmmREstimation and Simulation of Drifting Semi-Markov Models
DSMolgenisArmadillo'DataSHIELD' Client for 'MOLGENIS Armadillo'
dsmSearchDSM and LiDAR downloader
DSOpal'DataSHIELD' Implementation for 'Opal'
dsosDataset Shift with Outlier Scores
DSpotyGet 'Spotify' API Multiple Information
dsrTestTests and Confidence Intervals on Directly Standardized Rates for Several Methods
DSSATA Comprehensive R Interface for the DSSAT Cropping Systems Model
dssdDistance Sampling Survey Design
DSSPImplementation of the Direct Sampling Spatial Prior
dstUsing the Theory of Belief Functions
dstabledistThe Discrete Stable Distribution Functions
DstarMAnalyze Two Choice Reaction Time Data with the D*M Method
dstatConditional Sensitivity Analysis for Matched Observational Studies
dstat2x2xkDemonstrated Insensitivity to Bias in 2x2xK Contingency Tables
dSTEMMultiple Testing of Local Extrema for Detection of Change Points
dSVADirect Surrogate Variable Analysis
DSWEData Science for Wind Energy
DTA Wrapper of the JavaScript Library 'DataTables'
DtableoneTabular Comparison of Paired Diagnostic Tests
dtangleCell Type Deconvolution from Gene Expressions
DTAplotsCreates Plots Accompanying Bayesian Diagnostic Test Accuracy Meta-Analyses
DTATDose Titration Algorithm Tuning
DTAXGDiagnostic Test Assessment in the Absence of Gold Standard
dTBMMulti-Way Spherical Clustering via Degree-Corrected Tensor Block Models
dtCombStatistical Combination of Diagnostic Tests
DTComPairComparison of Binary Diagnostic Tests in a Paired Study Design
DtDDistance to Default
DTDADoubly Truncated Data Analysis
DTDA.cifDoubly Truncated Data Analysis, Cumulative Incidence Functions
DTDA.niDoubly Truncated Data Analysis, Non Iterative
dtgiwDiscrete Transmuted Generalized Inverse Weibull Distribution
dtiAnalysis of Diffusion Weighted Imaging (DWI) Data
DTMCPackSuite of Functions Related to Discrete-Time Discrete-State Markov Chains
dtpDynamic Panel Threshold Model
dtpcrmDose Transition Pathways for Continual Reassessment Method
dtplyrData Table Back-End for 'dplyr'
dtrackrTrack your Data Pipelines
DTRKernSmoothEstimate and Make Inference About Optimal Treatment Regimes via Smoothed Methods
DTRlearn2Statistical Learning Methods for Optimizing Dynamic Treatment Regimes
DTRregDTR Estimation and Inference via G-Estimation, Dynamic WOLS, Q-Learning, and Dynamic Weighted Survival Modeling (DWSurv)
dtrSurvDynamic Treatment Regimes for Survival Analysis
DTSEADrug Target Set Enrichment Analysis
DTSgA Class for Working with Time Series Data Based on 'data.table' and 'R6' with Largely Optional Reference Semantics
dttDiscrete Trigonometric Transforms
dttr2Manipulate Date, POSIXct and hms Vectors
dtts'data.table' Time-Series
dtwDynamic Time Warping Algorithms
DTWBIImputation of Time Series Based on Dynamic Time Warping
dtwclustTime Series Clustering Along with Optimizations for the Dynamic Time Warping Distance
DTwrappersSimplified Data Analysis with Wrapper Functions for the 'Data.Table' Package
DTwrappers2Extensions of 'DTwrappers'
DTWUMIImputation of Multivariate Time Series Based on Dynamic Time Warping
dualAutomatic Differentiation with Dual Numbers
dualScaleDual Scaling Analysis of Data
dualtreesDecimated and Undecimated 2D Complex Dual-Tree Wavelet Transform
duawranglrSecurely Wrangle Dataset According to Data Usage Agreement
dubUnpacking Assignment for Lists via Pattern Matching
duckdbDBI Package for the DuckDB Database Management System
duckdbfsHigh Performance Remote File System, Database and 'Geospatial' Access Using 'duckdb'
duckduckrSimple Client for the DuckDuckGo Instant Answer API
duckplyrA 'DuckDB'-Backed Version of 'dplyr'
dukeCreating a Color-Blind Friendly Duke Color Package
dumbbellDisplaying Changes Between Two Points Using Dumbbell Plots
dummyAutomatic Creation of Dummies with Support for Predictive Modeling
dundermifflinThe Office Quotes on-Demand
dunlinPreprocessing Tools for Clinical Trial Data
dunn.testDunn's Test of Multiple Comparisons Using Rank Sums
dupiRBayesian Inference from Count Data using Discrete Uniform Priors
dupNodesComputes DNSLbetweenness, a Betweenness Measure that Includes Self-Loops
dupreeIdentify Duplicated R Code in a Project
DurgaEffect Size Estimation and Visualisation
DVHmetricsAnalyze Dose-Volume Histograms and Check Constraints
dvirDisaster Victim Identification
dvmiscConvenience Functions, Moving Window Statistics, and Graphics
dvqccDynamic VAR - Based Control Charts for Batch Process Monitoring
dwctaxonEdit and Validate Darwin Core Taxon Data
DWDLargeRFast Algorithms for Large Scale Generalized Distance Weighted Discrimination
dwdradarRead Binary Radar Files from 'DWD' (German Weather Service)
DWLassoDegree Weighted Lasso
dwlmDoubly Weighted Linear Model
DWLSGene Expression Deconvolution Using Dampened Weighted Least Squares
dwpDensity-Weighted Proportion
DWregParametric Regression for Discrete Response
dyadsDyadic Network Analysis
dydeaDetection of Chaotic and Regular Intervals in the Data
dygraphsInterface to 'Dygraphs' Interactive Time Series Charting Library
DykstraQuadratic Programming using Cyclic Projections
DYMDid You Mean?
DyMEPDynamic Multi Environment Phenology-Model
dymoDynamic Mode Decomposition for Multivariate Time Feature Prediction
dynTime Series Regression
dyn.logDynamic Logging for R Inspired by Configuration Driven Development
dynamacDynamic Simulation and Testing for Single-Equation ARDL Models
dynamAedesA Unified Mechanistic Model for the Population Dynamics of Invasive Aedes Mosquitoes
dynamicDFI Cutoffs for Latent Variable Models
DynamicGPModelling and Analysis of Dynamic Computer Experiments
dynamicSDMSpecies Distribution and Abundance Modelling at High Spatio-Temporal Resolution
dynamicTreeCutMethods for Detection of Clusters in Hierarchical Clustering Dendrograms
dynamiteBayesian Modeling and Causal Inference for Multivariate Longitudinal Data
DynaRankRInferring Longitudinal Dominance Hierarchies
DynareRBringing the Power of 'Dynare' to 'R', 'R Markdown', and 'Quarto'
dynaSpecDynamic Spectrogram Visualizations
DYNATEDynamic Aggregation Testing
dynatopAn Implementation of Dynamic TOPMODEL Hydrological Model in R
dynatopGISAlgorithms for Helping Build Dynamic TOPMODEL Implementations from Spatial Data
dynaTreeDynamic Trees for Learning and Design
dynBiplotGUIFull Interactive GUI for Dynamic Biplot in R
DynClustDenoising and Clustering for Dynamical Image Sequence (2D or 3D)+t
dyncompComplexity of Short and Coarse-Grained Time Series
dynConfiRDynamic Models for Confidence and Response Time Distributions
dynCorrDynamic Correlation Package
dyndimredDimensionality Reduction Methods in a Common Format
dynetNLAResistanceResisting Neighbor Label Attack in a Dynamic Network
DynForestRandom Forest with Multivariate Longitudinal Predictors
dyngenA Multi-Modal Simulator for Spearheading Single-Cell Omics Analyses
dynlmDynamic Linear Regression
dynmixEstimation of Dynamic Finite Mixtures
DynNomVisualising Statistical Models using Dynamic Nomograms
dynpanelDynamic Panel Data Models
dynparamCreating Meta-Information for Parameters
dynpredCompanion Package to "Dynamic Prediction in Clinical Survival Analysis"
dynprogDynamic Programming Domain-Specific Language
dynrDynamic Models with Regime-Switching
dynRBDynamic Range Boxes
dynsimDynamic Simulations of Autoregressive Relationships
dynsurvDynamic Models for Survival Data
dyntaperDynamic Stem Profile Models, AKA Tree Taper Equations
DynTxRegimeMethods for Estimating Optimal Dynamic Treatment Regimes
dynutilsCommon Functionality for the 'dynverse' Packages
dynwrapRepresenting and Inferring Single-Cell Trajectories
dySEMDyadic Structural Equation Modeling
DysPIADysregulated Pathway Identification Analysis
DysPIADataBackground and Pathway Data Used in 'DysPIA'
DySSDynamic Screening Systems
e1071Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
E4toolsManagement and Processing Tools for Data Produced by the Empatica E4
eadrmFitting Dose-Response Models Using an Evolutionary Algorithm
eafPlots of the Empirical Attainment Function
EagleMultiple Locus Association Mapping on a Genome-Wide Scale
EAinferenceEstimator Augmentation and Simulation-Based Inference
eAnalyticsDynamic Web-Based Analytics for the Energy Industry
earlygatingProperties of Bayesian Early Gating Designs
earlyREstimation of Transmissibility in the Early Stages of a Disease Outbreak
earlywarningsEarly Warning Signals for Critical Transitions in Time Series
earthMultivariate Adaptive Regression Splines
earthdataloginNASA 'EarthData' Login Utilities
earthtideParallel Implementation of 'ETERNA 3.40' for Prediction and Analysis of Earth Tides
earthtonesDerive a Color Palette from a Particular Location on Earth
EaseSimulating Explicit Population Genetics Models
easy.utilsFrequently Used Functions for Easy R Programming
EasyABCEfficient Approximate Bayesian Computation Sampling Schemes
easyAHPAnalytic Hierarchy Process (AHP)
easyalluvialGenerate Alluvial Plots with a Single Line of Code
easyanovaAnalysis of Variance and Other Important Complementary Analyses
easybgmExtracting and Visualizing Bayesian Graphical Models
easycensusQuickly Find, Extract, and Marginalize U.S. Census Tables
easyclimateEasy Access to High-Resolution Daily Climate Data for Europe
easyCODACompositional Data Analysis in Practice
easycsvLoad Multiple 'csv' and 'txt' Tables
easydbEasily Connect to Common Types of Databases
easyDesAn Easy Way to Descriptive Analysis
EasyDescribeA Convenient Way of Descriptive Statistics
easyDifferentialGeneCoexpressionEasily Performs Differential Coexpression Analysis
easylabelInteractive Scatter Plot and Volcano Plot Labels
EasyMxEasy Model-Builder Functions for 'OpenMx'
easyNCDFTools to Easily Read/Write NetCDF Files into/from Multidimensional R Arrays
easynlsEasy Nonlinear Model
easyORtablesEasy Odds Ratio Tables
easypackagesEasy Loading and Installing of Packages
easypowerSample Size Estimation for Experimental Designs
easyPSIDReading, Formatting, and Organizing the Panel Study of Income Dynamics (PSID)
easyPubMedSearch and Retrieve Scientific Publication Records from PubMed
easyrHelpful Functions from Oliver Wyman Actuarial Consulting
easyregEasy Regression
easySdcTableEasy Interface to the Statistical Disclosure Control Package 'sdcTable' Extended with Own Implementation of 'GaussSuppression'
easystatsFramework for Easy Statistical Modeling, Visualization, and Reporting
easysurvSimplify Survival Data Analysis and Model Fitting
easySVGAn Easy SVG Basic Elements Generator
easyVerificationEnsemble Forecast Verification for Large Data Sets
easyWechatA Notifier for R Users by 'WeChat'
eatEfficiency Analysis Trees
eatATACreate Constraints for Small Test Assembly Problems
eatDBSpreadsheet Interface for Relational Databases
eatGADSData Management of Large Hierarchical Data
EATMEExponentially Weighted Moving Average with Adjustments to Measurement Error
eatRepEducational Assessment Tools for Replication Methods
eatToolsMiscellaneous Functions for the Analysis of Educational Assessments
ebaElimination-by-Aspects Models
ebalEntropy Reweighting to Create Balanced Samples
EBASEEstuarine Bayesian Single-Station Estimation Method for Ecosystem Metabolism
EbayesThreshEmpirical Bayes Thresholding and Related Methods
EBCHSAn Empirical Bayes Method for Chi-Squared Data
ebciRobust Empirical Bayes Confidence Intervals
ebdbNetEmpirical Bayes Estimation of Dynamic Bayesian Networks
EBENEmpirical Bayesian Elastic Net
ebGenotypingGenotyping and SNP Detection using Next Generation Sequencing Data
EBglmnetEmpirical Bayesian Lasso and Elastic Net Methods for Generalized Linear Models
ebirdstAccess and Analyze eBird Status and Trends Data Products
EBMAforecastEstimate Ensemble Bayesian Model Averaging Forecasts using Gibbs Sampling or EM-Algorithms
ebmcEnsemble-Based Methods for Class Imbalance Problem
ebmstateEmpirical Bayes Multi-State Cox Model
ebnmSolve the Empirical Bayes Normal Means Problem
EBPRSDerive Polygenic Risk Score Based on Emprical Bayes Theory
EBrankEmpirical Bayes Ranking
ebregImplementation of the Empirical Bayes Method
eBsc"Empirical Bayes Smoothing Splines with Correlated Errors"
ebTobitEmpirical Bayesian Tobit Matrix Estimation
ebvcubeWorking with netCDF for Essential Biodiversity Variables
ec50estimatorAn Automated Way to Estimate EC50 for Stratified Datasets
ecanEcological Analysis and Visualization
eCAREigenvalue CAR Models
ecbProgrammatic Access to the European Central Bank's Statistical Data Warehouse
ecceTranslate English Sentence into Chinese, or Translate Chinese Sentence into English
EcdatData Sets for Econometrics
ecdfHTEmpirical CDF for Heavy Tailed Data
ecespaFunctions for Spatial Point Pattern Analysis
EcfunFunctions for 'Ecdat'
ECGofTestDxA Goodness-of-Fit Test for Elliptical Distributions with Diagnostic Capabilities
echDownloading and Processing Microdata from ECH-INE (Uruguay)
ECharts2ShinyEmbedding Interactive Charts Generated with ECharts Library into Shiny Applications
echarts4rCreate Interactive Graphs with 'Echarts JavaScript' Version 5
echartyMinimal R/Shiny Interface to JavaScript Library 'ECharts'
echelonThe Echelon Analysis and the Detection of Spatial Clusters using Echelon Scan Method
eChemSimulations for Electrochemistry Experiments
echoEcho Code Evaluations
echo.findFinding Rhythms Using Extended Circadian Harmonic Oscillators (ECHO)
echogramEchogram Visualisation and Analysis
echoice2Choice Models with Economic Foundation
echorAccess EPA 'ECHO' Data
ecicExtended Changes-in-Changes
ecipexEfficient Calculation of Fine Structure Isotope Patterns via Fourier Transforms of Simplex-Based Elemental Models
ECLRMCEnsemble Correlation-Based Low-Rank Matrix Completion
eclustEnvironment Based Clustering for Interpretable Predictive Models in High Dimensional Data
ecmBuild Error Correction Models
ecmwfrInterface to 'ECMWF' and 'CDS' Data Web Services
ecocboCalculating Optimum Sampling Effort in Community Ecology
ecochangeIntegrating Ecosystem Remote Sensing Products to Derive EBV Indicators
ecocomDPTools to Create, Use, and Convert ecocomDP Data
ecoCopulaGraphical Modelling and Ordination using Copulas
ecodeOrdinary Differential Equation Systems in Ecology
EcoDietEstimating a Diet Matrix from Biotracer and Stomach Content Data
ecodistDissimilarity-Based Functions for Ecological Analysis
EcoEnsembleA General Framework for Combining Ecosystem Models
EcohydmodEcohydrological Modelling
EcoIndREcological Indicators
ECoLComplexity Measures for Supervised Problems
ecolMod"A Practical Guide to Ecological Modelling - Using R as a Simulation Platform"
ecolotteryCoalescent-Based Simulation of Ecological Communities
ecolRxCEcological Inference of RxC Tables by Latent Structure Approaches
ecolTestCommunity Ecology Tests
EconAndProdEfficiencyEconomic and Production Efficiency
EconDemandGeneral Analysis of Various Economics Demand Systems
econetEstimation of Parameter-Dependent Network Centrality Measures
EcoNetGenSimulate and Sample from Ecological Interaction Networks
econetworkAnalyzing Ecological Networks
EconGeoComputing Key Indicators of the Spatial Distribution of Economic Activities
economiccomplexityComputational Methods for Economic Complexity
econullnetrNull Model Analysis for Ecological Networks
ecopowerPower Estimates and Equivalence Testing for Multivariate Data
ecoregEcological Regression using Aggregate and Individual Data
ecoregimeAnalysis of Ecological Dynamic Regimes
ecorestConducts Analyses Informing Ecosystem Restoration Decisions
ecosEconomic Statistics System of the Bank of Korea
ecosimToolbox for Aquatic Ecosystem Modeling
ECOSolveREmbedded Conic Solver in R
ecospaceSimulating Community Assembly and Ecological Diversification Using Ecospace Frameworks
ecospatSpatial Ecology Miscellaneous Methods
ecostatsCode and Data Accompanying the Eco-Stats Text (Warton 2022)
ecostatscaleStatistical Scaling Functions for Ecological Systems
EcotoneFinderCharacterising and Locating Ecotones and Communities
ecotoxAnalysis of Ecotoxicology
ecotoxicologyMethods for Ecotoxicology
ECOTOXrDownload and Extract Data from US EPA's ECOTOX Database
ecotrajEcological Trajectory Analysis
EcoTrophAn Implementation of the EcoTroph Ecosystem Modelling Approach
ecovalProcedures for Ecological Assessment of Surface Waters
EcoVirtualSimulation of Ecological Models
ecpNon-Parametric Multiple Change-Point Analysis of Multivariate Data
ecpcFlexible Co-Data Learning for High-Dimensional Prediction
ecrEvolutionary Computation in R
ectotempQuantitative Estimates of Small Ectotherm Temperature Regulation Effectiveness
ECTSVRCointegration Based Support Vector Regression Model
ECTTDNNCointegration Based Timedelay Neural Network Model
EcumeEquality of 2 (or k) Continuous Univariate and Multivariate Distributions
eCVEnhanced Coefficient of Variation and IDR Extensions for Reproducibility Assessment
ed50Estimate ED50 and Its Confidence Interval
ed50simulationEstimate ED50 and Its Confidence Interval
EDAEnergy Decomposition Analysis
eda4treeRExperimental Design and Analysis for Tree Improvement
edbuildmaprDownload School District Geospatial Data, Perform Spatial Analysis, and Create Formatted Exportable Maps
EDCimportImport Data from EDC Software
edcpREcological Data Collection and Processing Package
eddingtonCompute a Cyclist's Eddington Number
edeaRExploratory and Descriptive Event-Based Data Analysis
edecobEvent Detection Using Confidence Bounds
edfRead Data from European Data Format (EDF and EDF+) Files
edfReaderReading EDF(+) and BDF(+) Files
EDFtestGoodness of Fit Based on Empirical Distribution Function
edfunCreating Empirical Distribution Functions
edgarTool for the U.S. SEC EDGAR Retrieval and Parsing of Corporate Filings
edgarWebRSEC Filings Access
edgebundleAlgorithms for Bundling Edges in Networks and Visualizing Flow and Metro Maps
edgebundleRCircle Plot with Bundled Edges
edgeCorrSpatial Edge Correction
edgedataDatasets that Support the EDGE Server DIY Logic
edibbleEncapsulating Elements of Experimental Design
ediblecityModeling Urban Agriculture at City Scale
edinaBayesian Estimation of an Exploratory Deterministic Input, Noisy and Gate Model
EDISONNetwork Reconstruction and Changepoint Detection
editbl'DT' Extension for CRUD (Create, Read, Update, Delete) Applications in 'shiny'
editData'RStudio' Addin for Editing a 'data.frame'
eDITHModel Transport of Environmental DNA in River Networks
editrulesParsing, Applying, and Manipulating Data Cleaning Rules
EDIutilsAn API Client for the Environmental Data Initiative Repository
edlToolbox for Error-Driven Learning Simulations with Two-Layer Networks
edlibRR Integration for Edlib, the C/C++ Library for Exact Pairwise Sequence Alignment using Edit (Levenshtein) Distance
eDMADynamic Model Averaging with Grid Search
edmcrEuclidean Distance Matrix Completion Tools
edmdataData Sets for Psychometric Modeling
EDMeasureEnergy-Based Dependence Measures
EDNE.EQImplements the EDNE-Test for Equivalence
EDOIFEmpirical Distribution Ordering Inference Framework (EDOIF)
EDOtransEuclidean Distance-Optimized Data Transformation
edstanStan Models for Item Response Theory
EdSurveyAnalysis of NCES Education Survey and Assessment Data
educationdataRetrieve Records from the Urban Institute's Education Data Portal API
educineqCompute and Decompose Inequality in Education
edwards97Langmuir Semi-Empirical Coagulation Model
EEAaqHandle Air Quality Data from the European Environment Agency Data Portal
eefAnalyticsRobust Analytical Methods for Evaluating Educational Interventions using Randomised Controlled Trials Designs
eegkitToolkit for Electroencephalography Data
eegkitdataElectroencephalography Toolkit Datasets
EEMRead and Preprocess Fluorescence Excitation-Emission Matrix (EEM) Data
eemdARIMAEEMD Based Auto Regressive Integrated Moving Average Model
EEMDelmEnsemble Empirical Mode Decomposition and Its Variant Based ELM Model
EEMDlstmEEMD Based LSTM Model for Time Series Forecasting
EEMDSVREnsemble Empirical Mode Decomposition and Its Variant Based Support Vector Regression Model
eemdTDNNEEMD and Its Variant Based Time Delay Neural Network Model
EEMLEnsemble Explainable Machine Learning Models
eemRTools for Pre-Processing Emission-Excitation-Matrix (EEM) Fluorescence Data
eeptoolsConvenience Functions for Education Data
eesimSimulate and Evaluate Time Series for Environmental Epidemiology
EESPCAEigenvectors from Eigenvalues Sparse Principal Component Analysis (EESPCA)
efModelling Framework for the Estimation of Salmonid Abundance
EFA.dimensionsExploratory Factor Analysis Functions for Assessing Dimensionality
EFA.MRFADimensionality Assessment Using Minimum Rank Factor Analysis
EFAtoolsFast and Flexible Implementations of Exploratory Factor Analysis Tools
EFAutilitiesUtility Functions for Exploratory Factor Analysis
efdmSimulate Forest Resources with the European Forestry Dynamics Model
EFDRWavelet-Based Enhanced FDR for Detecting Signals from Complete or Incomplete Spatially Aggregated Data
eff2Efficient Least Squares for Total Causal Effects
effClustCalculate Effective Number of Clusters for a Linear Model
EffectLiteRAverage and Conditional Effects
effectRPredicts Oomycete Effectors
effectsEffect Displays for Linear, Generalized Linear, and Other Models
effectsizeIndices of Effect Size
effectsizescrIndices for Single-Case Research
EffectStarsVisualization of Categorical Response Models
EffectStars2Effect Stars
EffectTreatPrediction of Therapeutic Success
EfficientMaxEigenpairEfficient Initials for Computing the Maximal Eigenpair
efflogThe Causal Effects for a Causal Loglinear Model
effsizeEfficient Effect Size Computation
eFREDFetch Data from the Federal Reserve Economic Database
EFSTool for Ensemble Feature Selection
egaError Grid Analysis
EGAnetExploratory Graph Analysis – a Framework for Estimating the Number of Dimensions in Multivariate Data using Network Psychometrics
egcmEngle-Granger Cointegration Models
eggExtensions for 'ggplot2': Custom Geom, Custom Themes, Plot Alignment, Labelled Panels, Symmetric Scales, and Fixed Panel Size
eggCountsHierarchical Modelling of Faecal Egg Counts
eglhmmExtended Generalised Linear Hidden Markov Models
EGMEvaluating Cardiac Electrophysiology Signals
EgoCorSimple Presentation of Estimated Exponential Semi-Variograms
egorImport and Analyse Ego-Centered Network Data
EGRETExploration and Graphics for RivEr Trends
EGRETciExploration and Graphics for RivEr Trends Confidence Intervals
EGRNiEnsemble Gene Regulatory Network Inference
eGSTLeveraging eQTLs to Identify Individual-Level Tissue of Interest for a Complex Trait
ehaEvent History Analysis
ehaGoFCalculates Goodness of Fit Statistics
eHDPrepQuality Control and Semantic Enrichment of Datasets
ehelpEnhanced Help to Enable "Docstring"-Comments in Users Functions
eHOFExtended HOF (Huisman-Olff-Fresco) Models
EHRElectronic Health Record (EHR) Data Processing and Analysis Tool
EHRtemporalVariabilityDelineating Temporal Dataset Shifts in Electronic Health Records
ehymetMethodologies for Functional Data Based on the Epigraph and Hypograph Indices
eiEcological Inference
ei.DatasetsReal Datasets for Assessing Ecological Inference Algorithms
eiaAPI Wrapper for U.S. Energy Information Administration ('EIA') Open Data
EIAapiQuery Data from the 'EIA' API
eiCirclesEcological Inference of RxC Tables by Overdispersed-Multinomial Models
eicmExplicit Interaction Community Models
eiderDeclarative Feature Extraction from Tabular Data Records
EIEntropyEcological Inference Applying Entropy
eiExpandUtilities for Expanding Functionality of 'eiCompare'
eigenmodelSemiparametric Factor and Regression Models for Symmetric Relational Data
EigenRComplex Matrix Algebra with 'Eigen'
eikosogramsThe Picture of Probability
eimputeEfficiently Impute Large Scale Incomplete Matrix
einetEffective Information and Causal Emergence
einsumEinstein Summation
eiopaRAccess to RFR (Risk-Free Rate) Curves Produced by the EIOPA
eiPackEcological Inference and Higher-Dimension Data Management
eirmExplanatory Item Response Modeling for Dichotomous and Polytomous Items
eiveAn Algorithm for Reducing Errors-in-Variable Bias in Simple and Multiple Linear Regressions
eivtoolsMeasurement Error Modeling Tools
EIXExplain Interactions in 'XGBoost'
eixportExport Emissions to Atmospheric Models
EKMCMCMCMC Procedures for Estimating Enzyme Kinetics Constants
eksTidy and Geospatial Kernel Smoothing
ELTwo-Sample Empirical Likelihood
EL2SurvEmpirical Likelihood (EL) for Comparing Two Survival Functions
elasdicsElastic Analysis of Sparse, Dense and Irregular Curves
elassoEnhanced Least Absolute Shrinkage and Selection Operator Regression Model
elastesElastic Full Procrustes Means for Sparse and Irregular Planar Curves
elasticGeneral Purpose Interface to 'Elasticsearch'
elasticnetElastic-Net for Sparse Estimation and Sparse PCA
elecCollection of Functions for Statistical Election Audits
EleChemrElectrochemical Reactions Simulation
electEstimation of Life Expectancies Using Multi-State Models
electionsUSA Presidential Elections Data
elections.dtreeRanked Voting Election Audits with Dirichlet-Trees
electionsBRR Functions to Download and Clean Brazilian Electoral Data
electivityAlgorithms for Electivity Indices
electoralAllocating Seats Methods and Party System Scores
elevatrAccess Elevation Data from Various APIs
ElevDistrCalculate the Distance to the Nearest Local Treeline
elexrLoad Associated Press Election Results with Elex
elfDistrKumaraswamy Complementary Weibull Geometric (Kw-CWG) Probability Distribution
elgbdEmpirical Likelihood for General Block Designs
elhmcSampling from a Empirical Likelihood Bayesian Posterior of Parameters Using Hamiltonian Monte Carlo
ELISAtoolsELISA Data Analysis with Batch Correction
elisrExploratory Likert Scaling
eListList Comprehension and Tools
elitismEquipment for Logarithmic and Linear Time Stepwise Multiple Hypothesis Testing
EljaLinear, Logistic and Generalized Linear Models Regressions for the EnvWAS/EWAS Approach
elliplotEllipse Summary Plot of Quantiles
ellipseFunctions for Drawing Ellipses and Ellipse-Like Confidence Regions
ellipsisTools for Working with ...
ElliptCopulasInference of Elliptical Distributions and Copulas
ellipticWeierstrass and Jacobi Elliptic Functions
ellipticalsymmetryElliptical Symmetry Tests
elmNNRcppThe Extreme Learning Machine Algorithm
ELMRExtreme Machine Learning (ELM)
ELMSOImplementation of the Efficient Large-Scale Online Display Advertising Algorithm
eLNNpairedCovModel-Based Gene Selection for Paired Data
eloRanking Teams by Elo Rating and Comparable Methods
EloChoicePreference Rating for Visual Stimuli Based on Elo Ratings
EloOptimizedOptimized Elo Rating Method for Obtaining Dominance Ranks
EloRatingAnimal Dominance Hierarchies by Elo Rating
EloSteepnessBayesian Dominance Hierarchy Steepness via Elo Rating and David's Scores
elrmExact Logistic Regression via MCMC
elsaEntropy-Based Local Indicator of Spatial Association
ELTExperience Life Tables
eltrUtilise Catastrophe Model Event Loss Table Outputs
ELYPEmpirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model
emGeneric EM Algorithm
EM.FuzzyEM Algorithm for Maximum Likelihood Estimation by Non-Precise Information
emailjsr'emailjs' Support
emailvalidationClient for the 'emailalvalidation.io' E-Mail Validation API
EMAREmpirical Model Assessment
EMASEpigenome-Wide Mediation Analysis Study
emayiliSend Email Messages
emBayesRobust Bayesian Variable Selection via Expectation-Maximization
EMbCExpectation-Maximization Binary Clustering
embedExtra Recipes for Encoding Predictors
EmbedSOMFast Embedding Guided by Self-Organizing Map
embryogrowthTools to Analyze the Thermal Reaction Norm of Embryo Growth
EMClusterEM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution
EMDEmpirical Mode Decomposition and Hilbert Spectral Analysis
EMDANNhybridEmpirical Mode Decomposition Based Artificial Neural Network Model
emdbookSupport Functions and Data for "Ecological Models and Data"
emdiEstimating and Mapping Disaggregated Indicators
emdistEarth Mover's Distance
EMDSVRhybridEmpirical Mode Decomposition Based Support Vector Regression Model
emeryAccuracy Statistic Estimation for Imperfect Gold Standards
emgExponentially Modified Gaussian (EMG) Distribution
EMgaussianExpectation-Maximization Algorithm for Multivariate Normal (Gaussian) with Missing Data
emhawkesExponential Multivariate Hawkes Model
EmiREvolutionary Minimizer for R
emIRTEM Algorithms for Estimating Item Response Theory Models
EmissVTools for Create Emissions for Air Quality Models
EmiStatREmissions and Statistics in R for Wastewater and Pollutants in Combined Sewer Systems
EMJMCMCEvolutionary Mode Jumping Markov Chain Monte Carlo Expert Toolbox
EMLRead and Write Ecological Metadata Language Files
emldEcological Metadata as Linked Data
EMLIComputationally Efficient Maximum Likelihood Identification of Linear Dynamical Systems
EMMAgeoEnd-Member Modelling of Grain-Size Data
emmeansEstimated Marginal Means, aka Least-Squares Means
EMMIXgeneA Mixture Model-Based Approach to the Clustering of Microarray Expression Data
EMMIXmfaMixture Models with Component-Wise Factor Analyzers
EMMIXSSLSemi-Supervised Gaussian Mixture Model with a Missing-Data Mechanism
EMMLiA Maximum Likelihood Approach to the Analysis of Modularity
EMMREMLFitting Mixed Models with Known Covariance Structures
emoaEvolutionary Multiobjective Optimization Algorithms
emojiData and Function to Work with Emojis
emojifontEmoji and Font Awesome in Graphics
emonTools for Environmental and Ecological Survey Design
emovEye Movement Analysis Package for Fixation and Saccade Detection
EMPExpected Maximum Profit Classification Performance Measure
EMpeaksRConducting the Peak Fitting Based on the EM Algorithm
emphaticExploratory Analysis of Tabular Data using Colour Highlighting
empicharEvaluates the Empirical Characteristic Function for Multivariate Samples
EmpiricalCalibrationRoutines for Performing Empirical Calibration of Observational Study Estimates
emplikEmpirical Likelihood Ratio for Censored/Truncated Data
emplik2Empirical Likelihood Ratio Test for Two Samples with Censored Data
emplikAUCEmpirical Likelihood Ratio Test/Confidence Interval for AUC or pAUC
emsEpimed Solutions Collection for Data Editing, Analysis, and Benchmark of Health Units
EMSaovThe Analysis of Variance with EMS
EMSCExtended Multiplicative Signal Correction
EMSNMEM Algorithm for Sigmoid Normal Model
EMSSSome EM-Type Estimation Methods for the Heckman Selection Model
emstreeRTools for Fast Computing and Visualizing Euclidean Minimum Spanning Trees
EMTExact Multinomial Test: Goodness-of-Fit Test for Discrete Multivariate Data
emulatorBayesian Emulation of Computer Programs
emuRMain Package of the EMU Speech Database Management System
EncDNAEncoding of Nucleotide Sequences into Numeric Feature Vectors
eNchangeEnsemble Methods for Multiple Change-Point Detection
encodeRepresent Ordered Lists and Pairs as Strings
EncompassTestDirect Multi-Step Forecast Based Comparison of Nested Models via an Encompassing Test
encryptedRmdEncrypt Html Reports Using 'Libsodium'
encryptrEasily Encrypt and Decrypt Data Frame/Tibble Columns or Files using RSA Public/Private Keys
endogeneityRecursive Two-Stage Models to Address Endogeneity
endogenousClassical Simultaneous Equation Models
endorseBayesian Measurement Models for Analyzing Endorsement Experiments
endoSwitchEndogenous Switching Regression Models
endtoendTransmissions and Receptions in an End to End Network
energyE-Statistics: Multivariate Inference via the Energy of Data
EnergyOnlineCPMDistribution Free Multivariate Control Chart Based on Energy Test
energyrData Published by the United States Federal Energy Regulatory Commission
enerscapeCompute Energy Landscapes
enetLTSRobust and Sparse Methods for High Dimensional Linear and Binary and Multinomial Regression
englishTranslate Integers into English
EngrEconEngineering Economics Analysis for Engineering Projects Cost Analysis
engressionEngression Modelling
EngrExptData sets from "Introductory Statistics for Engineering Experimentation"
ENMevalAutomated Tuning and Evaluations of Ecological Niche Models
enmpaEcological Niche Modeling using Presence-Absence Data
enmSdmXSpecies Distribution Modeling and Ecological Niche Modeling
ENMToolsAnalysis of Niche Evolution using Niche and Distribution Models
enplsEnsemble Partial Least Squares Regression
EnrichIntersectEnrichment Analysis and Intersecting Sankey Diagram
enrichRProvides an R Interface to 'Enrichr'
enrichwithMethods to Enrich R Objects with Extra Components
EnsCatClustering of Categorical Data
EnsembleBaseExtensible Package for Parallel, Batch Training of Base Learners for Ensemble Modeling
ensembleBMAProbabilistic Forecasting using Ensembles and Bayesian Model Averaging
EnsembleCVExtensible Package for Cross-Validation-Based Integration of Base Learners
ensembleMOSEnsemble Model Output Statistics
EnsemblePCRegExtensible Package for Principal-Component-Regression-Based Heterogeneous Ensemble Meta-Learning
EnsemblePenRegExtensible Classes and Methods for Penalized-Regression-Based Integration of Base Learners
ensembleppEnsemble Postprocessing Data Sets
ensembleTaxEnsemble Taxonomic Assignments of Amplicon Sequencing Data
enshumanHuman Gene Annotation Data from 'Ensembl'
ensrElastic Net SearcheR
entropartEntropy Partitioning to Measure Diversity
EntropicStatisticsFunctions Based on Entropic Statistics
entropyEstimation of Entropy, Mutual Information and Related Quantities
EntropyEstimationEstimation of Entropy and Related Quantities
EntropyMCMCMCMC Simulation and Convergence Evaluation using Entropy and Kullback-Leibler Divergence Estimation
entrymodelsEstimate Entry Models
envalysisMiscellaneous Functions for Environmental Analyses
EnvCptDetection of Structural Changes in Climate and Environment Time Series
envDocumentDocument the R Working Environment
enveomics.RVarious Utilities for Microbial Genomics and Metagenomics
enviEnvironmental Interpolation using Spatial Kernel Density Estimation
enviGCMSGC/LC-MS Data Analysis for Environmental Science
enviPatIsotope Pattern, Profile and Centroid Calculation for Mass Spectrometry
envirManage R Environments Better
enviremGeneration of ENVIREM Variables
EnviroPRA2Environmental Probabilistic Risk Assessment Tools
envnamesKeep Track of User-Defined Environment Names
EnvNicheRNiche Estimation
EnvNJWhole Genome Phylogenies Using Sequence Environments
envoutliersMethods for Identification of Outliers in Environmental Data
envstatConfigurable Reporting on your External Compute Environment
EnvStatsPackage for Environmental Statistics, Including US EPA Guidance
envvarMake Working with Environment Variables Easier and More Consistent
eoa3Wildlife Mortality Estimator for Low Fatality Rates and Imperfect Detection
eodhdOfficial 'eodhd' API R Financial Library
eofficeExport or Graph and Tables to 'Microsoft' Office and Import Figures and Tables
eoRData Management Package (Exposure and Occurrence Data in R)
epadeEasy Plots
epandistStatistical Functions for the Censored and Uncensored Epanechnikov Distribution
epanet2toolkitCall 'EPANET' Functions to Simulate Pipe Networks
epanetReaderRead Epanet Files into R
epcaExploratory Principal Component Analysis
ePCREnsemble Penalized Cox Regression for Survival Prediction
epe4mdEPE's 4MD Model to Forecast the Adoption of Distributed Generation
ephArgentina's Permanent Household Survey Data and Manipulation Utilities
EpiStatistical Analysis in Epidemiology
epibasixElementary Epidemiological Functions for Epidemiology and Biostatistics
epicastingEwnet: An Ensemble Wavelet Neural Network for Forecasting and Epicasting
epiCleanrA Tidy Solution for Epidemiological Data
epiCoStatistical and Viz Tools for Vector-Borne Diseases in Colombia
epicontactsHandling, Visualisation and Analysis of Epidemiological Contacts
EpiContactTraceEpidemiological Tool for Contact Tracing
EpiCurvePlot an Epidemic Curve
epidataTools to Retrieve Economic Policy Institute Data Library Extracts
epidatrClient for Delphi's 'Epidata' API
epiDisplayEpidemiological Data Display Package
epidmUK Epidemiological Data Management
EpiDynamicsDynamic Models in Epidemiology
EpiEstimEstimate Time Varying Reproduction Numbers from Epidemic Curves
epifitterAnalysis and Simulation of Plant Disease Progress Curves
epiflowsPredicting Disease Spread from Flow Data
EpiForskCode Sharing at the Department of Epidemiological Research at Statens Serum Institut
epigraphdbInterface Package for the 'EpiGraphDB' Platform
epigrowthfitNonlinear Mixed Effects Models of Epidemic Growth
EpiILMSpatial and Network Based Individual Level Models for Epidemics
EpiILMCTContinuous Time Distance-Based and Network-Based Individual Level Models for Epidemics
EpiInvertVariational Techniques in Epidemiology
epikitMiscellaneous Helper Tools for Epidemiologists
epilogiThe 'epilogi' Variable Selection Algorithm for Continuous Data
EpiLPSA Fast and Flexible Bayesian Tool for Estimating Epidemiological Parameters
epimdrFunctions and Data for "Epidemics: Models and Data in R"
epimdr2Functions and Data for "Epidemics: Models and Data in R (2nd Edition)"
EpiModelMathematical Modeling of Infectious Disease Dynamics
epinetEpidemic/Network-Related Tools
epinetrEpistatic Network Modelling with Forward-Time Simulation
EpiNow2Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters
epiomicsAnalysis of Omics Data in Observational Studies
epiphyAnalysis of Plant Disease Epidemics
epiRTools for the Analysis of Epidemiological Data
EpiReportEpidemiological Report
episcanScan Pairwise Epistasis
EpiSembleEnsemble Based Machine Learning Approach for Predicting Methylation States
episensrBasic Sensitivity Analysis of Epidemiological Results
EpiSignalDetectionSignal Detection Analysis
EpiStatsTools for Epidemiologists
EpistemicGameTheoryConstructing an Epistemic Model for the Games with Two Players
epitabFlexible Contingency Tables for Epidemiology
EpiTestTest for Gene x Gene Interactions in Bi-Parental Populations
epitoolsEpidemiology Tools
epitrixSmall Helpers and Tricks for Epidemics Analysis
epitweetrEarly Detection of Public Health Threats from 'Twitter' Data
epiworldRFast Agent-Based Epi Models
epiworldRShinyA 'shiny' Wrapper of the R Package 'epiworldR'
EPLSIMPartial Linear Single Index Models for Environmental Mixture Analysis
eplusrA Toolkit for Using Whole Building Simulation Program 'EnergyPlus'
eplyApply a Function Over Expressions
epmrobRobust Estimation of Probit Models with Endogeneity
epoEnhanced Portfolio Optimization (EPO)
epocEndogenous Perturbation Analysis of Cancer
epocakirClinical Coding of Patients with Kidney Disease
epongeKeep Your Environment Clean
eposEpilepsy Ontologies' Similarities
epoxyString Interpolation for Documents, Reports and Apps
eprEasy Polynomial Regression
epsiwalExact Post Selection Inference with Applications to the Lasso
EPTEnsemble Patch Transform, Visualization and Decomposition
epubrRead EPUB File Metadata and Text
epwshiftrCreate Future 'EnergyPlus' Weather Files using 'CMIP6' Data
EPXEnsemble of Phalanxes
epxToRImport 'Epidata' XML Files '.epx'
eq5dMethods for Analysing 'EQ-5D' Data and Calculating 'EQ-5D' Index Scores
eq5dsuiteManipulating and Analysing EQ-5d Data
EQLExtended-Quasi-Likelihood-Function (EQL)
equalCovsTesting the Equality of Two Covariance Matrices
Equalden.HDTesting the Equality of a High Dimensional Set of Densities
equaltestMIExamine Measurement Invariance via Equivalence Testing and Projection Method
equatagsEquations to 'XML'
equateObserved-Score Linking and Equating
equateIRTIRT Equating Methods
equateMultipleEquating of Multiple Forms
equatiomaticTransform Models into 'LaTeX' Equations
equil2Calculate Urinary Saturation with the EQUIL2 Algorithm
EquiSurvModeling, Confidence Intervals and Equivalence of Survival Curves
equivalenceProvides Tests and Graphics for Assessing Tests of Equivalence
equivalenceTestEquivalence Test for the Means of Two Normal Distributions
EQUIVNONINFTesting for Equivalence and Noninferiority
equivUMPUniformly Most Powerful Invariant Tests of Equivalence
EREffect + Residual Modelling
eraYear-Based Time Scales
erahAutomated Spectral Deconvolution, Alignment, and Metabolite Identification in GC/MS-Based Untargeted Metabolomics
erboostNonparametric Multiple Expectile Regression via ER-Boost
ercvFitting Tails by the Empirical Residual Coefficient of Variation
ERDbuilderEntity Relationship Diagrams Builder
erfeFits Expectile Regression for Panel Fixed Effect Model
ergmFit, Simulate and Diagnose Exponential-Family Models for Networks
ergm.countFit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges
ergm.egoFit, Simulate and Diagnose Exponential-Family Random Graph Models to Egocentrically Sampled Network Data
ergm.multiFit, Simulate and Diagnose Exponential-Family Models for Multiple or Multilayer Networks
ergm.rankFit, Simulate and Diagnose Exponential-Family Models for Rank-Order Relational Data
ergMarginsProcess Analysis for Exponential Random Graph Models
ergmgpTools for Modeling ERGM Generating Processes
ergmharrisLocal Health Department network data set
ergmitoExponential Random Graph Models for Small Networks
erifyCheck Arguments and Generate Readable Error Messages
eRmExtended Rasch Modeling
ernEffective Reproduction Number Estimation
ERPSignificance Analysis of Event-Related Potentials Data
erp.easyEvent-Related Potential (ERP) Data Exploration Made Easy
ERPeqProbabilistic Hazard Assessment
ERPMExponential Random Partition Models
erroristAutomatically Search Errors or Warnings
errorlocateLocate Errors with Validation Rules
errorsUncertainty Propagation for R Vectors
errumExploratory Reduced Reparameterized Unified Model Estimation
ERSAExploratory Regression 'Shiny' App
eRTG3DEmpirically Informed Random Trajectory Generation in 3-D
es.difCompute Effect Sizes of the Difference
esaddleExtended Empirical Saddlepoint Density Approximations
esapsIndicators of Electoral Systems and Party Systems
esbackExpected Shortfall Backtesting
escEffect Size Computation for Meta Analysis
escalationA Modular Approach to Dose-Finding Clinical Trials
esciEstimation Statistics with Confidence Intervals
EScvtmleExperiment-Selector CV-TMLE for Integration of Observational and RCT Data
esDesignAdaptive Enrichment Designs with Sample Size Re-Estimation
eSDMEnsemble Tool for Predictions from Species Distribution Models
eseisEnvironmental Seismology Toolbox
eselectAdaptive Clinical Trial Designs with Endpoint Selection and Sample Size Reassessment
esemExploratory Structural Equation Modeling ESEM
esemifarSmoothing Long-Memory Time Series
ESGA Package for Asset Projection
eshrinkShrinkage for Effect Estimation
eSIRExtended State-Space SIR Models
esmiscMisc Functions of Eduard Szöcs
esmprepData Preparation During and After the Use of the Experience Sampling Methodology (ESM)
esmtoolsPreprocessing Experience Sampling Method (ESM) Data
espadonEasy Study of Patient DICOM Data in Oncology
esquisseExplore and Visualize Your Data Interactively
esregJoint Quantile and Expected Shortfall Regression
essEfficient Stepwise Selection in Decomposable Models
essentialsEssential Functions not Included in Base R
essHistThe Essential Histogram
essurveyDownload Data from the European Social Survey on the Fly
estadisticaFundamentos De Estadistica Descriptiva e Inferencial
estatapiR Interface to e-Stat API
EstCRMCalibrating Parameters for the Samejima's Continuous IRT Model
ESTEREfficient Sequential Testing with Evidence Ratios
estimabilityTools for Assessing Estimability of Linear Predictions
EstimateGroupNetworkPerform the Joint Graphical Lasso and Selects Tuning Parameters
estimateWEstimation of Spatial Weight Matrices
EstimationToolsMaximum Likelihood Estimation for Probability Functions from Data Sets
estimatorsParameter Estimation
estimatrFast Estimators for Design-Based Inference
EstimDiagnosticsDiagnostic Tools and Unit Tests for Statistical Estimators
estimrawEstimation of Four-Fold Table Cell Frequencies (Raw Data) from Effect Size Measures
estmeansdEstimating the Sample Mean and Standard Deviation from Commonly Reported Quantiles in Meta-Analysis
EstMixTumor Clones Percentage Estimations
estprodEstimation of Production Functions
esvisVisualization and Estimation of Effect Sizes
et.nwfvaForest Yield Tables for Northwest Germany and their Application
etableEasy Table
ETASModeling Earthquake Data Using 'ETAS' Model
ETASbootstrapBootstrap Confidence Interval Estimation for 'ETAS' Model Parameters
etasFLPMixed FLP and ML Estimation of ETAS Space-Time Point Processes for Earthquake Description
ETCEquivalence to Control
ethnobotanyRCalculate Quantitative Ethnobotany Indices
EthSEQEthnicity Annotation from Whole-Exome and Targeted Sequencing Data
etlExtract-Transform-Load Framework for Medium Data
ETLUtilsUtility Functions to Execute Standard Extract/Transform/Load Operations (using Package 'ff') on Large Data
etmEmpirical Transition Matrix
etrader'ETRADE' API Interface for R
etreeClassification and Regression with Structured and Mixed-Type Data
etrmEnergy Trading and Risk Management
etrunctComputes Moments of Univariate Truncated t Distribution
etwfeExtended Two-Way Fixed Effects
EuclideanSDAn Euclidean View of Center and Spread
EuclimatchEuclidean Climatch Algorithm
eudractCreates Safety Results Summary in XML to Upload to EudraCT, or ClinicalTrials.gov
eufmdis.adaptAnalyse 'EuFMDiS' Output Files via a Shiny App
EUfootballFootball Match Data of European Leagues
eulerianeulerian: A package to find eulerian paths from graphs
eulerrArea-Proportional Euler and Venn Diagrams with Ellipses
eummdEfficient Univariate Maximum Mean Discrepancy
eunis.habitatsEUNIS Habitat Classification
EunomiaStandard Dataset Manager for Observational Medical Outcomes Partnership Common Data Model Sample Datasets
eurlexRetrieve Data on European Union Law
eurocordexrMakes it Easier to Work with Daily 'netCDF' from EURO-CORDEX RCMs
eurodataFast and Easy Eurostat Data Import and Search
euroleaguer'Euroleague basketball API'
europeanaRInteract with Metadata Records and Media on the Europeana Repository
europepmcR Interface to the Europe PubMed Central RESTful Web Service
europopHistorical Populations of European Cities, 1500-1800
EurosarcBayesBayesian Single Arm Sample Size Calculation Software
eurostatTools for Eurostat Open Data
evaExtreme Value Analysis with Goodness-of-Fit Testing
evabicEvaluation of Binary Classifiers
EvaclusterEvaluation Clustering Methods for Disease Subtypes Diagnosis
evalITREvaluating Individualized Treatment Rules
evalREvaluation of Unverified Code
evaluateParsing and Evaluation Tools that Provide More Details than the Default
EvaluateCoreQuality Evaluation of Core Collections
EvaluationMeasuresCollection of Model Evaluation Measure Functions
EValueSensitivity Analyses for Unmeasured Confounding and Other Biases in Observational Studies and Meta-Analyses
evapoReEvapotranspiration R Recipes
EvapotranspirationModelling Actual, Potential and Reference Crop Evapotranspiration
EVchargcostComputes and Plot the Optimal Charging Strategy for Electric Vehicles
evclassEvidential Distance-Based Classification
evclustEvidential Clustering
EvCombREvidence Combination in R
evdFunctions for Extreme Value Distributions
evdbayesBayesian Analysis in Extreme Value Theory
eventEvent History Procedures and Models
eventdataREvent Data Repository
EventDetectGUIGraphical User Interface for the 'EventDetectR' Package
EventDetectREvent Detection Framework
eventglmRegression Models for Event History Outcomes
eventIntervalSequential Event Interval Analysis
eventPredEvent Prediction
EventPredInCureEvent Prediction Including Cured Population
eventstreamStreaming Events and their Early Classification
eventstudyrEstimation and Visualization of Linear Panel Event Studies
eventTrackEvent Prediction for Time-to-Event Endpoints
EventWinRatiosEvent-Specific Win Ratios for Terminal and Non-Terminal Events
evgamGeneralised Additive Extreme Value Models
EVIEpidemic Volatility Index as an Early-Warning Tool
evianEvidential Analysis of Genetic Association Data
evidenceAnalysis of Scientific Evidence Using Bayesian and Likelihood Methods
evidenceFactorsReporting Tools for Sensitivity Analysis of Evidence Factors in Observational Studies
EvidenceSynthesisSynthesizing Causal Evidence in a Distributed Research Network
evidentEvidence Factors in Observational Studies
EviewsRA Seamless Integration of 'EViews' and R
evilDiceTest Dice Sets for Intransitive Properties
evinfInference with Extreme Value Inflated Count Data
evirExtreme Values in R
evitaicossaAntiassociative Algebra
evmixExtreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation
evobiRComparative and Population Genetic Analyses
evolMapDynamic and Interactive Maps
evolqgEvolutionary Quantitative Genetics
EvolutionaryGamesImportant Concepts of Evolutionary Game Theory
evolvabilityCalculation of Evolvability Parameters
EvomorphEvolutionary Morphometric Simulation
evoperEvolutionary Parameter Estimation for 'Repast Simphony' Models
EvoPhyloPre- And Postprocessing of Morphological Data from Relaxed Clock Bayesian Phylogenetics
evoTSAnalyses of Evolutionary Time-Series
evprofElectric Vehicle Charging Sessions Profiling and Modelling
evregEvidential Regression
evsimElectric Vehicle Charging Sessions Simulation
evt0Mean of Order P, Peaks over Random Threshold Hill and High Quantile Estimates
evtclassExtreme Value Theory for Open Set Classification - GPD and GEV Classifiers
evtreeEvolutionary Learning of Globally Optimal Trees
EWGoFGoodness-of-Fit Tests for the Exponential and Two-Parameter Weibull Distributions
ewocEscalation with Overdose Control
EWOC.CombEscalation with Overdose Control using 2 Drug Combinations
ewpAn Empirical Model for Underdispersed Count Data
EwREconometrics with R
EWSEarly Warning System
EWSmethodsForecasting Tipping Points at the Community Level
ExactUnconditional Exact Test
exact.nExact Samples Sizes and Inference for Clinical Trials with Binary Endpoint
exact2x2Exact Tests and Confidence Intervals for 2x2 Tables
exactamenteExplore the Exact Bootstrap Method
exactciExact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases
ExactCIdiffInductive Confidence Intervals for the Difference Between Two Proportions
ExactCIoneAdmissible Exact Intervals for One-Dimensional Discrete Distributions
ExactCoxExact Test and Exact Confidence Interval for the Cox Model
exactextractrFast Extraction from Raster Datasets using Polygons
exactLTREAn Exact Method for Life Table Response Experiment (LTRE) Analysis
ExactMedExact Mediation Analysis for Binary Outcomes
ExactMultinomMultinomial Goodness-of-Fit Tests
exactRankTestsExact Distributions for Rank and Permutation Tests
ExamPADataData Sets for Predictive Analytics Exam
exampletestrHelp for Writing Unit Tests Based on Function Examples
examsAutomatic Generation of Exams in R
exams.forgeSupport for Compiling Examination Tasks using the 'exams' Package
exams.mylearnQuestion Generation in the 'MyLearn' XML Format
exams2learnrInterface for 'exams' Exercises in 'learnr' Tutorials
exams2sakaiAutomatic Generation of Exams in R for 'Sakai'
ExceedanceToolsConfidence/Credible Regions for Exceedance Sets and Contour Lines
exceedProbConfidence Intervals for Exceedance Probability
excel.linkConvenient Data Exchange with Microsoft Excel
excel2eprimeSplit Sentences by Factors
exceldataStreamline Data Import, Cleaning and Recoding from 'Excel'
ExcelFunctionsRImports Excel Functions to R
excelRA Wrapper of the 'JavaScript' Library 'jExcel'
ExcessMassExcess Mass Calculation and Plots
excessmortExcess Mortality
excluderChecks for Exclusion Criteria in Online Data
ExclusionTableCreating Tables of Excluded Observations
exConInteractive Exploration of Contour Data
excursionsExcursion Sets and Contour Credibility Regions for Random Fields
exdexEstimation of the Extremal Index
exdqlmExtended Dynamic Quantile Linear Models
executablePackeRMake 'shiny' App to Executable Program
ExGaussEstimQuantile Maximization Likelihood Estimation and Bayesian Ex-Gaussian Estimation
ExhaustiveSearchA Fast and Scalable Exhaustive Feature Selection Framework
exifRead EXIF Metadata from JPEGs
exifrEXIF Image Data in R
exiftoolrExifTool Functionality from R
ExNRuleEnsembleA k Nearest Neibour Ensemble Based on Extended Neighbourhood Rule
ExpAnalysis3dPacote Para Analise De Experimentos Com Graficos De Superficie Resposta
ExPanDaRExplore Your Data Interactively
expandFunctionsFeature Matrix Builder
EXPARFitting of Exponential Autoregressive (EXPAR) Model
EXPARMAFitting of Exponential Autoregressive Moving Average (EXPARMA) Model
expDBDatabase for Experiment Dataset
ExpDEModular Differential Evolution for Experimenting with Operators
ExpDesExperimental Designs Package
ExpDes.ptPacote Experimental Designs (Portugues)
expectregExpectile and Quantile Regression
experDesignDesign Experiments for Batches
experiencesExperience Research
experimentR Package for Designing and Analyzing Randomized Experiments
experimentrDatasets Used in Social Science Experiments: A Hands-on Introduction
ExpertChoiceDesign of Discrete Choice and Conjoint Analysis
ExpGeneticNon-Additive Expression Analysis of Hybrid Offspring
ExpImageAnalysis of Images in Experiments
expintExponential Integral and Incomplete Gamma Function
expirestExpiry Estimation Procedures
explainerMachine Learning Model Explainer
ExplainPredictionExplanation of Predictions for Classification and Regression Models
ExplodeLayoutCalculate Exploded Coordinates Based on Original Node Coordinates and Node Clustering Membership
explorInteractive Interfaces for Results Exploration
exploratoryA Tool for Large-Scale Exploratory Analyses
exploreSimplifies Exploratory Data Analysis
exploreRTools for Quickly Exploring Data
expmMatrix Exponential, Log, 'etc'
exportStreamlined Export of Graphs and Data Tables
ExPositionExploratory Analysis with the Singular Value Decomposition
ExposRModels Topographic Exposure to Hurricane Winds
expowoData Mining of Plant Diversity and Distribution
exppermComputing Expectations and Marginal Likelihoods for Permutations
ExpRepExperiment Repetitions
expSBMAn Exponential Stochastic Block Model for Interaction Lengths
expsmoothData Sets from "Forecasting with Exponential Smoothing"
expssTables, Labels and Some Useful Functions from Spreadsheets and 'SPSS' Statistics
expstudyTools for Actuarial Experience Studies
exreportFast, Reliable and Elegant Reproducible Research
EXRQExtreme Regression of Quantiles
extBatchMarkingExtended Batch Marking Models
ExtDistExtending the Range of Functions for Probability Distributions
extendedFamilyAdditional Families for Generalized Linear Models
exteriorMatchConstructs the Exterior Match from Two Matched Control Groups
extlassoMaximum Penalized Likelihood Estimation with Extended Lasso Penalty
ExtMallowsAn Extended Mallows Model and Its Hierarchical Version for Ranked Data Aggregation
ExtractTrainDataExtract Values from Raster
extraDistrAdditional Univariate and Multivariate Distributions
extrafontTools for Using Fonts
extrafontdbPackage for holding the database for the extrafont package
extrafrailEstimation and Additional Tools for Alternative Shared Frailty Models
extraoperatorsExtra Binary Relational and Logical Operators
extrasHelper Functions for Bayesian Analyses
extraterrestrialAstrobiology Equations Estimating Extraterrestrial Life
extRatumSummary Statistics for Geospatial Features
extRCExtended RC Models for Contingency Tables
ExtremalDepExtremal Dependence Models
ExtremeBoundsExtreme Bounds Analysis (EBA)
extremefitEstimation of Extreme Conditional Quantiles and Probabilities
extremeIndexForecast Verification for Extreme Events
ExtremeRisksExtreme Risk Measures
extRemesExtreme Value Analysis
extremeStatExtreme Value Statistics and Quantile Estimation
extremevaluesUnivariate Outlier Detection
extremisStatistics of Extremes
extremogramEstimation of Extreme Value Dependence for Time Series Data
ExtrPattSpatial Dependencies and Indices for Extremes
exuberEconometric Analysis of Explosive Time Series
exvatoolsValue Added in Exports and Other Input-Output Table Analysis Tools
eyeAnalysis of Eye Data
eyedataOpen Source Ophthalmic Data Sets Curated for R
eyelinkerImport ASC Files from EyeLink Eye Trackers
eyelinkReaderImport Gaze Data for EyeLink Eye Tracker
eyeReadPrepare/Analyse Eye Tracking Data for Reading
eyetrackingREye-Tracking Data Analysis
eyeTrackROrganising and Analysing Eye-Tracking Data
ezEasy Analysis and Visualization of Factorial Experiments
ez.combatEasy ComBat Harmonization
ezcoxEasily Process a Batch of Cox Models
ezCutoffsFit Measure Cutoffs in SEM
ezecEasy Interface to Effective Concentration Calculations
ezEDATask Oriented Interface for Exploratory Data Analysis
EzGPEasy-to-Interpret Gaussian Process Models for Computer Experiments
ezknitrAvoid the Typical Working Directory Pain When Using 'knitr'
ezmmekEasy Michaelis-Menten Enzyme Kinetics
ezplotFunctions for Common Chart Types
ezrEasy Use of R via Shiny App for Basic Analyses of Experimental Data
EZtuneTunes AdaBoost, Elastic Net, Support Vector Machines, and Gradient Boosting Machines
f1dataRAccess Formula 1 Data
FaaSrFaaS (Function as a Service) Package
fabCIFAB Confidence Intervals
FABInferenceFAB p-Values and Confidence Intervals
fabisearchChange Point Detection in High-Dimensional Time Series Networks
fableForecasting Models for Tidy Time Series
fable.ata'ATAforecasting' Modelling Interface for 'fable' Framework
fable.prophetProphet Modelling Interface for 'fable'
fableCountINGARCH and GLARMA Models for Count Time Series in Fable Framework
fabletoolsCore Tools for Packages in the 'fable' Framework
fabMixOverfitting Bayesian Mixtures of Factor Analyzers with Parsimonious Covariance and Unknown Number of Components
fabPredictionCompute FAB (Frequentist and Bayes) Conformal Prediction Intervals
fabRWrapper Functions Collection Used in Data Pipelines
fabricatrImagine Your Data Before You Collect It
fabricerinCreate Easily Canvas in 'shiny' and 'RMarkdown' Documents
faceFast Covariance Estimation for Sparse Functional Data
facebookadsRAccess to Facebook Ads via the 'Windsor.ai' API
facebookleadsRGet Facebook Leads Ads Data via the 'Windsor.ai' API
facebookorganicRGet Data from 'Facebook Organic' via the 'Windsor.ai' API
facerecAn Interface for Face Recognition
facmodCSCross-Section Factor Models
facmodTSTime Series Factor Models for Asset Returns
FACTFeature Attributions for ClusTering
factivInstrumental Variables Estimation for 2^k Factorial Experiments
FACTMLEMaximum Likelihood Factor Analysis
FactoClassCombination of Factorial Methods and Cluster Analysis
factoextraExtract and Visualize the Results of Multivariate Data Analyses
FactoInvestigateAutomatic Description of Factorial Analysis
FactoMineRMultivariate Exploratory Data Analysis and Data Mining
factoptdFactorial Optimal Designs for Two-Colour cDNA Microarray Experiments
factor.switchingPost-Processing MCMC Outputs of Bayesian Factor Analytic Models
factor256Use Raw Vectors to Minimize Memory Consumption of Factors
FactorAssumptionsSet of Assumptions for Factor and Principal Component Analysis
FactorCopulaFactor, Bi-Factor, Second-Order and Factor Tree Copula Models
factorial2x2Design and Analysis of a 2x2 Factorial Trial
factormodelFactor Model Estimation Using Proxy Variables
factorplotPresenting Pairwise Comparisons
factorstochvolBayesian Estimation of (Sparse) Latent Factor Stochastic Volatility Models
factoryBuild Function Factories
FactoshinyPerform Factorial Analysis from 'FactoMineR' with a Shiny Application
factRegMulti-Environment Genomic Prediction with Penalized Factorial Regression
factset.analyticsapi.engines'FactSet' Engines API Client
factset.protobuf.stach.v2'FactSet' 'STACH V2' Library
factset.protobuf.stachextensions'FactSet' 'STACH' Extensions Package
fadFactor Analysis for Data
FADAVariable Selection for Supervised Classification in High Dimension
FAdistDistributions that are Sometimes Used in Hydrology
FADPclustFunctional Data Clustering Using Adaptive Density Peak Detection
faersquarterlydataFDA Adverse Event Reporting System Quarterly Data Extracting Tool
FAfAFactor Analysis for All
FahrmeirData from the Book "Multivariate Statistical Modelling Based on Generalized Linear Models", First Edition, by Ludwig Fahrmeir and Gerhard Tutz
failFile Abstraction Interface Layer (FAIL)
fairadaptFair Data Adaptation with Quantile Preservation
FAIRmaterialsOntology Tools with Data FAIRification in Development
FairMclusClustering for Data with Sensitive Attribute
fairmlFair Models in Machine Learning
fairmodelsFlexible Tool for Bias Detection, Visualization, and Mitigation
fairnessAlgorithmic Fairness Metrics
fairsubsetChoose Representative Subsets
fakeFlexible Data Simulation Using the Multivariate Normal Distribution
fakemakeMock the Unix Make Utility
fakirGenerate Fake Datasets for Prototyping and Teaching
fakmctFuzzy Adaptive Resonance Theory K-Means Clustering Technique
falconFinding Allele-Specific Copy Number in Next-Generation Sequencing Data
falconxFinding Allele-Specific Copy Number in Whole-Exome Sequencing Data
fam.recriskFamilial Recurrence Risk
FAMetAFatty Acid Metabolic Analysis
FamEventFamily Age-at-Onset Data Simulation and Penetrance Estimation
familialStatistical Tests of Familial Hypotheses
familiarEnd-to-End Automated Machine Learning and Model Evaluation
FamiliasProbabilities for Pedigrees Given DNA Data
FamiliesKinship Ties in (Virtual) Multi-Generation Populations
FamilyRankAlgorithm for Ranking Predictors Using Graphical Domain Knowledge
FAmleMaximum Likelihood and Bayesian Estimation of Univariate Probability Distributions
FAMoSA Flexible Algorithm for Model Selection
famSKATRCFamily Sequence Kernel Association Test for Rare and Common Variants
FAMTFactor Analysis for Multiple Testing (FAMT) : Simultaneous Tests under Dependence in High-Dimensional Data
fancPenalized Likelihood Factor Analysis via Nonconvex Penalty
fANCOVANonparametric Analysis of Covariance
fancycutA Fancy Version of 'base::cut'
fangsFeature Allocation Neighborhood Greedy Search Algorithm
fanovaGraphBuilding Kriging Models from FANOVA Graphs
fanplotVisualisation of Sequential Probability Distributions Using Fan Charts
fansiANSI Control Sequence Aware String Functions
fanyiTranslate Words or Sentences via Online Translators
FAO56Evapotranspiration Based on FAO Penman-Monteith Equation
FAOSTATDownload Data from the FAOSTAT Database
faoutlierInfluential Case Detection Methods for Factor Analysis and Structural Equation Models
faqCreate FAQ Page
farModelization for Functional AutoRegressive Processes
farawayFunctions and Datasets for Books by Julian Faraway
FARDEEPFast and Robust Deconvolution of Tumor Infiltrating Lymphocyte from Expression Profiles using Least Trimmed Squares
farffA Faster 'ARFF' File Reader and Writer
FarmSelectFactor Adjusted Robust Model Selection
FarmTestFactor-Adjusted Robust Multiple Testing
farrData and Code for Financial Accounting Research
farrellInteractive Interface to Data Envelopment Analysis Modeling
farverHigh Performance Colour Space Manipulation
FASFactor-Augmented Sparse Regression Tuning-Free Testing
fasano.franceschini.testFasano-Franceschini Test: A Multivariate Kolmogorov-Smirnov Two-Sample Test
faseFunctional Adjacency Spectral Embedding
FASegJoint Segmentation of Correlated Time Series
fasjemA Fast and Scalable Joint Estimator for Learning Multiple Related Sparse Gaussian Graphical Models
fAssetsRmetrics - Analysing and Modelling Financial Assets
fasstrAnalyze, Summarize, and Visualize Daily Streamflow Data
FAST.RAnalyze and Visualize FAST-Generated Data
fastaFast Adaptive Shrinkage/Thresholding Algorithm
fastadiSelf-Tuning Data Adaptive Matrix Imputation
fastAFTFast Regression for the Accelerated Failure Time (AFT) Model
fastaiInterface to 'fastai'
fastbackwardFast Backward Elimination Based on Information Criterion
FastBandCholFast Estimation of a Covariance Matrix by Banding the Cholesky Factor
fastbetaFast Approximation of Time-Varying Infectious Disease Transmission Rates
fastclusterFast Hierarchical Clustering Routines for R and 'Python'
fastcmhSignificant Interval Discovery with Categorical Covariates
fastcmprskFine-Gray Regression via Forward-Backward Scan
fastcoxLasso and Elastic-Net Penalized Cox's Regression in High Dimensions Models using the Cocktail Algorithm
fastcpdFast Change Point Detection via Sequential Gradient Descent
FastCUBFast Estimation of CUB Models via Louis' Identity
fastdigestFast, Low Memory Footprint Digests of R Objects
fastDummiesFast Creation of Dummy (Binary) Columns and Rows from Categorical Variables
fasterElasticNetAn Amazing Fast Way to Fit Elastic Net
fasterizeFast Polygon to Raster Conversion
fastFMMFast Functional Mixed Models using Fast Univariate Inference
FastGaSPFast and Exact Computation of Gaussian Stochastic Process
fastGHQuadFast 'Rcpp' Implementation of Gauss-Hermite Quadrature
fastGLCM'GLCM' Texture Features
fastglmFast and Stable Fitting of Generalized Linear Models using 'RcppEigen'
fastglmpcaFast Algorithms for Generalized Principal Component Analysis
FastGPEfficiently Using Gaussian Processes with Rcpp and RcppEigen
fastGraphFast Drawing and Shading of Graphs of Statistical Distributions
fastICAFastICA Algorithms to Perform ICA and Projection Pursuit
FastImputationLearn from Training Data then Quickly Fill in Missing Data
FastJMSemi-Parametric Joint Modeling of Longitudinal and Survival Data
fastJTEfficient Jonckheere-Terpstra Test Statistics
FastKMA Fast Multiple-Kernel Method Based on a Low-Rank Approximation
fastkmedoidsFaster K-Medoids Clustering Algorithms: FastPAM, FastCLARA, FastCLARANS
FastKNNFast k-Nearest Neighbors
fastkqrA Fast Algorithm for Kernel Quantile Regression
fastLinkFast Probabilistic Record Linkage with Missing Data
fastliuFast Functions for Liu Regression with Regularization Parameter and Statistics
fastLogisticRegressionWrapFast Logistic Regression Wrapper
fastlogitMEBasic Marginal Effects for Logit Models
fastMFast Computation of Multivariate M-Estimators
fastmapFast Data Structures
fastmatchFast 'match()' Function
fastMatMRHigh-Performance Matrix Market File Operations
fastmatrixFast Computation of some Matrices Useful in Statistics
fastmitFast Mutual Information Based Independence Test
fastNaiveBayesExtremely Fast Implementation of a Naive Bayes Classifier
fastnetLarge-Scale Social Network Analysis
fastOnlineCptOnline Multivariate Changepoint Detection
FastPCSFastPCS Robust Fit of Multivariate Location and Scatter
fastposFinds the Critical Sequential Point of Stability for a Pearson Correlation
fastqcrQuality Control of Sequencing Data
fastqqFaster Generation of Quantile Quantile Plots with Large Samples
fastR2Foundations and Applications of Statistics Using R (2nd Edition)
FastRCSFits the FastRCS Robust Multivariable Linear Regression Model
fastrepTime-Saving Package for Creating Reports
fastRGSample Generalized Random Dot Product Graphs in Linear Time
fastRhockeyFunctions to Access Premier Hockey Federation and National Hockey League Play by Play Data
fastrmodelsModels for the 'nflfastR' Package
FastRWebFast Interactive Framework for Web Scripting Using R
FastSFFast Structural Filtering
fastshapFast Approximate Shapley Values
fastSOMFast Calculation of Spillover Measures
FastStepGraphA Fast Algorithm for Sparse Precision Matrix Estimation
fastTextEfficient Learning of Word Representations and Sentence Classification
fastTextRAn Interface to the 'fastText' Library
fasttimeFast Utility Function for Time Parsing and Conversion
fastTopicsFast Algorithms for Fitting Topic Models and Non-Negative Matrix Factorizations to Count Data
fastTSFast Time Series Modeling for Seasonal Series with Exogenous Variables
FastUtilsFast, Readable Utility Functions
fastverseA Suite of High-Performance Packages for Statistics and Data Manipulation
fastWaveletsCompute Maximal Overlap Discrete Wavelet Transform (MODWT) and À Trous Discrete Wavelet Transform
fat2LpolyTwo-Locus Family-Based Association Test with Polytomous Outcome
FateIDQuantification of Fate Bias in Multipotent Progenitors
FatTailsRKiener Distributions and Fat Tails in Finance
FaultTreeFault Trees for Risk and Reliability Analysis
fauxSimulation for Factorial Designs
fauxnaifConvert Values to NA
fauxpasHTTP Error Helpers
FAVARBayesian Analysis of a FAVAR Model
faviconPleaseFind the URL to the 'Favicon' for a Website
favnumsA Dataset of Favourite Numbers
FAwRFunctions and Datasets for "Forest Analytics with R"
fbarAn Extensible Approach to Flux Balance Analysis
fBasicsRmetrics - Markets and Basic Statistics
fbatiGene by Environment Interaction and Conditional Gene Tests for Nuclear Families
FBCRMPhase I Optimal Dose Assignment using the FBCRM and MFBCRM Methods
FBFsearchAlgorithm for Searching the Space of Gaussian Directed Acyclic Graph Models Through Moment Fractional Bayes Factors
FBMSFlexible Bayesian Model Selection and Model Averaging
FBNFISH Based Normalization and Copy Number Inference of SNP Microarray Data
fbnetForensic Bayesian Networks
fBondsRmetrics - Pricing and Evaluating Bonds
fbRadsAnalyzing and Managing Facebook Ads from R
fbrocFast Algorithms to Bootstrap Receiver Operating Characteristics Curves
fbstThe Full Bayesian Evidence Test, Full Bayesian Significance Test and the e-Value
fcStandard Evaluation-Based Multivariate Function Composition
fcaFloating Catchment Area (FCA) Methods to Calculate Spatial Accessibility
fcaRFormal Concept Analysis
fcciFeldman-Cousins Confidence Intervals
fcfdrFlexible cFDR
fcirtForced Choice in Item Response Theory
fclA Financial Calculator
fclustFuzzy Clustering
fcmInference of Fuzzy Cognitive Maps (FCMs)
FCMapperFuzzy Cognitive Mapping
FCOFlexible Cutoffs for Model Fit Evaluation in Covariance-Based Structural Models
fCopulaeRmetrics - Bivariate Dependence Structures with Copulae
fcpFunction Composition
FCPSFundamental Clustering Problems Suite
fcrFunctional Concurrent Regression for Sparse Data
fcrosA Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations
fctbasesFunctional Bases
fcukThe Ultimate Helper for Clumsy Fingers
FCVAREstimation and Inference for the Fractionally Cointegrated VAR
FDMeasuring Functional Diversity (FD) from Multiple Traits, and Other Tools for Functional Ecology
fdaFunctional Data Analysis
fda.uscFunctional Data Analysis and Utilities for Statistical Computing
fdaACFAutocorrelation Function for Functional Time Series
fdaclusterJoint Clustering and Alignment of Functional Data
fdaconcurConcurrent Regression and History Index Models for Functional Data
fdadensityFunctional Data Analysis for Density Functions by Transformation to a Hilbert Space
fdaMixedFunctional Data Analysis in a Mixed Model Framework
fdaMoccaModel-Based Clustering for Functional Data with Covariates
fdANOVAAnalysis of Variance for Univariate and Multivariate Functional Data
fdaoutlierOutlier Detection Tools for Functional Data Analysis
fdapaceFunctional Data Analysis and Empirical Dynamics
fdapaceShinyA Shiny App for the 'fdapace' Package
fdaPDEPhysics-Informed Spatial and Functional Data Analysis
fdaPOIFDPartially Observed Integrated Functional Depth
fdarepTwo-Dimensional FPCA, Marginal FPCA, and Product FPCA for Repeated Functional Data
fdaSPSparse Functional Data Analysis Methods
fdasrvfElastic Functional Data Analysis
fdatestInterval Testing Procedure for Functional Data
FDboostBoosting Functional Regression Models
fddmFast Implementation of the Diffusion Decision Model
fdicdataAccessing FDIC Bank Data
fdm2idData Mining and R Programming for Beginners
fDMADynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes
fdqForest Data Quality
fdrciPermutation-Based FDR Point and Confidence Interval Estimation
fdrDiscreteNullFalse Discovery Rate Procedures Under Discrete and Heterogeneous Null Distributions
FDRestimationEstimate, Plot, and Summarize False Discovery Rates
FDRsamplesize2Computing Power and Sample Size for the False Discovery Rate in Multiple Applications
FDRsampsizeCompute Sample Size that Meets Requirements for Average Power and FDR
fdrtoolEstimation of (Local) False Discovery Rates and Higher Criticism
fdsFunctional Data Sets
fdthFrequency Distribution Tables, Histograms and Polygons
fdWassersteinApplication of Optimal Transport to Functional Data Analysis
FDXFalse Discovery Exceedance Controlling Multiple Testing Procedures
FEAFinite Element Modeling for R
FeaLectScores Features for Feature Selection
feastsFeature Extraction and Statistics for Time Series
featherR Bindings to the Feather 'API'
featureLocal Inferential Feature Significance for Multivariate Kernel Density Estimation
featureCorMatrixMeasurement Level Independent Feature Correlation Matrix
FeatureExtractionGenerating Features for a Cohort
featurefinderFeature Finder
featureflagTurn Features On and Off using Feature Flags
FeatureHashingCreates a Model Matrix via Feature Hashing with a Formula Interface
FeatureImpClusterFeature Importance for Partitional Clustering
featuresFeature Extraction for Discretely-Sampled Functional Data
FeatureTerminatoRFeature Selection Engine to Remove Features with Minimal Predictive Power
featurizerSome Helper Functions that Help Create Features from Data
fec16Data Package for the 2016 United States Federal Elections
fechnerFechnerian Scaling of Discrete Object Sets
fectFixed Effects Counterfactuals
FedDataFunctions to Automate Downloading Geospatial Data Available from Several Federated Data Sources
federalregisterClient Package for the U.S. Federal Register API
FedIRTFederated Item Response Theory Models
fedmatchFast, Flexible, and User-Friendly Record Linkage Methods
fedregsText Analysis of the US Code of Federal Regulations
fedstatAPIrUnofficial API for Fedstat (Rosstat EMISS System) for Automatic and Efficient Data Queries
fedz1An Easier Access to Financial Accounts of the United States(Z.1)
FeedbackTSAnalysis of Feedback in Time Series
feisrEstimating Fixed Effects Individual Slope Models
felpFunctional Help for Functions, Objects, and Packages
feltrAccess the Felt API
fenceUsing Fence Methods for Model Selection
FENmlmFixed Effects Nonlinear Maximum Likelihood Models
FEprovideRFixed Effects Logistic Model with High-Dimensional Parameters
FERFinancial Engineering in R
fergmEstimation and Fit Assessment of Frailty Exponential Random Graph Models
fermicatsRFermi Large Area Telescope Catalogs
ferrnFacilitate Exploration of touRR optimisatioN
FertBootFertilizer Response Curve Analysis by Bootstrapping Residuals
fertilmodelFertility Models
FertNetProcess Data from the Social Networks and Fertility Survey
FEStaFishing Effort Standardisation
fetchFetch Data from Various Data Sources
fetchGoogleAnalyticsRGet Data from Google Analytics via the 'Windsor.ai' API
fetchSalesforceRGet Data from Salesforce via the 'Windsor.ai' API
fExtremesRmetrics - Modelling Extreme Events in Finance
ffMemory-Efficient Storage of Large Data on Disk and Fast Access Functions
FFDFreedom from Disease
FFdownloadDownload Data from Kenneth French's Website
ffmanovaFifty-Fifty MANOVA
ffpFully Flexible Probabilities for Stress Testing and Portfolio Construction
ffscraprAPI Client for Fantasy Football League Platforms
FFTreesGenerate, Visualise, and Evaluate Fast-and-Frugal Decision Trees
fftwFast FFT and DCT Based on the FFTW Library
fftwtoolsWrapper for 'FFTW3' Includes: One-Dimensional, Two-Dimensional, Three-Dimensional, and Multivariate Transforms
FGalgorithmFlury and Gautschi algorithms
fGarchRmetrics - Autoregressive Conditional Heteroskedastic Modelling
fgdrUtilities for Fundamental Geo-Spatial Data
fgeoAnalyze Forest Diversity and Dynamics
fgeo.analyzeAnalyze ForestGEO Data
fgeo.plotPlot ForestGEO Data
fgeo.toolImport and Manipulate 'ForestGEO' Data
fgeo.xAccess Small ForestGEO Datasets For Examples
fgitRUsing 'FastGit' to Accelerate the Access to 'GitHub'
FGLMtruncTruncated Functional Generalized Linear Models
fglsnetA Feasible Generalized Least Squares Estimator for Regression Analysis of Outcomes with Network Dependence
fgmPartial Separability and Functional Gaussian Graphical Models
FgmutilsForest Growth Model Utilities
fguiFunction GUI
FHDIFractional Hot Deck and Fully Efficient Fractional Imputation
fhircrackrHandling HL7 FHIR® Resources in R
fHMMFitting Hidden Markov Models to Financial Data
FHtestTests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class
FIProvide functions for forest inventory calculations
fiberLDFiber Length Determination
ficFocused Information Criteria for Model Comparison
fICAClassical, Reloaded and Adaptive FastICA Algorithms
fideliusBrowser-Side Password-Protected HTML Documents
fidoBayesian Multinomial Logistic Normal Regression
FielDHubA Shiny App for Design of Experiments in Life Sciences
fieldsTools for Spatial Data
FieldSimRSimulation of Plot Errors and Phenotypes in Plant Breeding Field Trials
fieryA Lightweight and Flexible Web Framework
FIESTAForest Inventory Estimation and Analysis
FIESTAutilsUtility Functions for Forest Inventory Estimation and Analysis
figA Config Package with No "Con"
figirCheck Validity of FIGI, CUSIP, ISIN, SEDOL
figmaWeb Client/Wrapper to the 'Figma API'
figpatchEasily Arrange External Figures with Patchwork Alongside 'ggplot2' Figures
figuRes2Support for a Variety of Figure Production Tasks
file2mecoTransform Files to 'microtable' Object with 'microeco' Package
filearrayFile-Backed Array for Out-of-Memory Computation
filebinWrapper for the Filebin File Sharing API
filecacherFile Cacher
filehashSimple Key-Value Database
filehashSQLiteSimple Key-Value Database using SQLite
filelockPortable File Locking
filematrixFile-Backed Matrix Class with Convenient Read and Write Access
filenamerEasy Management of File Names
filesEffective File Navigation from the R Console
filesstringsHandy File and String Manipulation
FILESTFine-Level Structure Simulator
fillingMatrix Completion, Imputation, and Inpainting Methods
fillpatternPatterned Fills for 'ggplot2' and 'grid' Graphics
fillrFill Missing Values in Vectors
filterNHPNon-Human Primate Search Filters
filtersA "Snake_case" Filter System for R
fImportRmetrics - Importing Economic and Financial Data
finalfitQuickly Create Elegant Regression Results Tables and Plots when Modelling
finalsizeCalculate the Final Size of an Epidemic
FinAnaFinancial Analysis and Regression Diagnostic Analysis
FinancialInstrumentFinancial Instrument Model Infrastructure and Meta-Data
FinancialMathFinancial Mathematics for Actuaries
finbifInterface for the 'Finnish Biodiversity Information Facility' API
finbipartiteLearning Bipartite Graphs: Heavy Tails and Multiple Components
FinCalTime Value of Money, Time Series Analysis and Computational Finance
finchParse Darwin Core Files
FinCovRegularizationCovariance Matrix Estimation and Regularization for Finance
findGSEPEstimate Genome Size of Polyploid Species Using k-Mer Frequencies
findInFilesFind Pattern in Files
findInGitFind Pattern in Files of All Branches of a 'git' Repository
FindItFinding Heterogeneous Treatment Effects
findPackageFind 'CRAN' Package by Topic
findpythonFunctions to Find an Acceptable Python Binary
findRFind Code Snippets, R Scripts, R Markdown, PDF and Text Files with Pattern Matching
findSVICalculate Social Vulnerability Index for Communities
findviewsA View Generator for Multidimensional Data
FinePopFine-Scale Population Analysis
FinePop2Fine-Scale Population Analysis (Rewrite for Gene-Trait-Environment Interaction Analysis)
finetuneAdditional Functions for Model Tuning
fingerprintFunctions to Operate on Binary Fingerprint Data
fingerProSediment Source Fingerprinting
fingraphLearning Graphs for Financial Markets
finiteruinprobComputation of the Probability of Ruin Within a Finite Time Horizon
finityTest for Finiteness of Moments in a Distribution
FinNetQuickly Build and Manipulate Financial Networks
finnishgrid'Fingrid Open Data API' R Client
finnsurveytextAnalyse Open-Ended Survey Responses in Finnish
finntsMicrosoft Finance Time Series Forecasting Framework
finreportrFinancial Data from U.S. Securities and Exchange Commission
FinTSCompanion to Tsay (2005) Analysis of Financial Time Series
fipioLightweight Federal Information Processing System (FIPS) Code Information Retrieval
fippInduced Priors in Bayesian Mixture Models
FiREFinder of Rare Entities (FiRE)
firebaseIntegrates 'Google Firebase' Authentication Storage, and 'Analytics' with 'Shiny'
firebehavioRPrediction of Wildland Fire Behavior and Hazard
firstFactor Importance Ranking and Selection using Total Indices
FiShFisher-Shannon Method
fishbcFishes of British Columbia
fishdataA Small Collection of Fish Population Datasets
FisherEMThe FisherEM Algorithm to Simultaneously Cluster and Visualize High-Dimensional Data
fisheyeTransform Base Maps Using Log-Azimuthal Projection
fishkirkko2015Dataset of Measurements of Fish Species at Kirkkojarvi Lake, Finland
fishmethodsFishery Science Methods and Models
fishModFits Poisson-Sum-of-Gammas GLMs, Tweedie GLMs, and Delta Log-Normal Models
FishPhyloMakerPhylogenies for a List of Finned-Ray Fishes
FishRespAnalytical Tool for Aquatic Respirometry
fishRmanThe Fisheries Scientist's Toolbox
fishtreeInterface to the Fish Tree of Life API
fishualizeColor Palettes Based on Fish Species
FisProFuzzy Inference System Design and Optimization
FITTranscriptomic Dynamics Models in Field Conditions
fit.modelsCompare Fitted Models
fitbitrInterface with the 'Fitbit' API
fitbitScraperScrapes Data from Fitbit
fitbitViz'Fitbit' Visualizations
fitConicFit Data to Any Conic Section
fitdistrplusHelp to Fit of a Parametric Distribution to Non-Censored or Censored Data
FitDynMixEstimation of Dynamic Mixtures
fitHeavyTailMean and Covariance Matrix Estimation under Heavy Tails
fitlandrFit Vector Fields and Potential Landscapes from Intensive Longitudinal Data
fitmixFinite Mixture Model Fitting of Lifespan Datasets
fitODBODModeling Over Dispersed Binomial Outcome Data Using BMD and ABD
fitODBODRshiny'Shiny' Application for R Package 'fitODBOD'
fitodeTools for Ordinary Differential Equations Model Fitting
fitplcFit Hydraulic Vulnerability Curves
fitPolyGenotype Calling for Bi-Allelic Marker Assays
fitPSFit Zeta Distributions to Forensic Data
fitscapeClasses for Fitness Landscapes and Seascapes
FITSioFITS (Flexible Image Transport System) Utilities
fitteRFit Hundreds of Theoretical Distributions to Empirical Data
FitUltDFit Univariate Mixed and Usual Distributions
fiturFit Univariate Distributions
fitzRoyEasily Scrape and Process AFL Data
fivethirtyeightData and Code Behind the Stories and Interactives at 'FiveThirtyEight'
fixedincomeFixed Income Models, Calculations, Data Structures and Instruments
FixedPointAlgorithms for Finding Fixed Point Vectors of Functions
fixedpointpropertyDetermine and Test the Fixed-Point Property in Binary Mixture Data
fixedTimeEventsThe Distribution of Distances Between Discrete Events in Fixed Time
fixerapiAn R Client for the "Fixer.io" Currency API
fixestFast Fixed-Effects Estimations
fixrFixing Data Made Easy for Statistical Analysis
FixSeqMTPFixed Sequence Multiple Testing Procedures
fixtuResMock Data Generator
fizzbuzzRFizz Buzz Implementation
FjordLightAvailable Light Within the Water Column and Seafloor of Arctic Fjords
FKFFast Kalman Filter
FKF.SPFast Kalman Filtering Through Sequential Processing
FKSUMFast Kernel Sums
flaccoFeature-Based Landscape Analysis of Continuous and Constrained Optimization Problems
flagrImplementation of Flag Aggregation
flamFits Piecewise Constant Models with Data-Adaptive Knots
FLAMEInterpretable Matching for Causal Inference
flametreeGenerate Random Tree-Like Images
flamingosFunctional Latent Data Models for Clustering Heterogeneous Curves ('FLaMingos')
flanFLuctuation ANalysis on Mutation Models
flapForecast Linear Augmented Projection
flareFamily of Lasso Regression
flashCardCreate a Flash Card
flashClustImplementation of optimal hierarchical clustering
flashierEmpirical Bayes Matrix Factorization
flashlightShed Light on Black Box Machine Learning Models
flashrCreate Flashcards of Terms and Definitions
flatrTransforms Contingency Tables to Data Frames, and Analyses Them
flattablerObtaining a Flat Table from Pivot Tables
flatxmlTools for Working with XML Files as R Dataframes
fledgeSmoother Change Tracking and Versioning for R Packages
flevrFlexible, Ensemble-Based Variable Selection with Potentially Missing Data
flexclustFlexible Cluster Algorithms
flexCWMFlexible Cluster-Weighted Modeling
flexdashboardR Markdown Format for Flexible Dashboards
FlexDirTools to Work with the Flexible Dirichlet Distribution
FlexGAMGeneralized Additive Models with Flexible Response Functions
flexiblas'FlexiBLAS' API Interface
flexlsxExporting 'flextable' to 'xlsx' Files
flexmetFlexible Latent Trait Metrics using the Filtered Monotonic Polynomial Item Response Model
flexmixFlexible Mixture Modeling
flexmixNLFinite Mixture Modeling of Generalized Nonlinear Models
flexmsmA General Framework for Flexible Multi-State Survival Modelling
flexORFlexible Odds Ratio Curves
FlexParamCurveTools to Fit Flexible Parametric Curves
flexpolylineFlexible Polyline Encoding
FlexRegRegression Models for Bounded Continuous and Discrete Responses
flexrsurvFlexible Relative Survival Analysis
FlexScanFlexible Scan Statistics
flexsiteboardBreaks Single Page Applications from 'flexdashboard' in Multiple Files
flexsurvFlexible Parametric Survival and Multi-State Models
flexsurvcureFlexible Parametric Cure Models
flextableFunctions for Tabular Reporting
FlexVarJMEstimate Joint Models with Subject-Specific Variance
FlickrAPIAccess to Flickr API
flifoDon't Get Stuck with Stacks in R
flightplotPlotting Flight Paths on Maps
FLightRReconstruct Animal Paths from Solar Geolocation Loggers Data
flightsbrDownload Flight and Airport Data from Brazil
flimoFixed Landscape Inference Method
flintyRSimple and Flexible Tests of Sample Exchangeability
flipMultivariate Permutation Tests
flipbookrParses Code, Creates Partial Code Builds, Delivers Code Movie
flipdownrImplement a Countdown in 'RMarkdown' Documents and 'shiny' Applications
flipdownWidgetsA Wrapper of JavaScript Library 'flipdown.js'
flippantDithionite Scramblase Assay Analysis
fliprFlexible Inference via Permutations in R
flipscoresRobust Score Testing in GLMs, by Sign-Flip Contributions
FLLatFused Lasso Latent Feature Model
float32-Bit Floats
flobrConvert Files to and from Binary Objects (BLOBs)
flockProcess Synchronization Using File Locks
flockerFlexible Occupancy Estimation with Stan
floodStatistical Methods for the (Regional) Analysis of Flood Frequency
FloodFreqPlotFlood Probability Plotting and Graphical Frequency Analysis
FLOPARTFunctional Labeled Optimal Partitioning
floraTools for Interacting with the Brazilian Flora 2020
florabrExplore Flora e Funga do Brasil Database
FLORALFit Log-Ratio Lasso Regression for Compositional Data
flowView and Browse Code Using Flow Diagrams
flowchartTidy Flowchart Generator
FlowerMateReciprocity Indices for Style-Polymorphic Plants
flowmlA Backend for a 'nextflow' Pipeline that Performs Machine-Learning-Based Modeling of Biomedical Data
flowrStreamlining Design and Deployment of Complex Workflows
FlowRegEnvCostThe Environmental Costs of Flow Regulation
FlowScreenDaily Streamflow Trend and Change Point Screening
flowTraceRTracing Information Flow for Inter-Software Comparisons in Mass Spectrometry-Based Bottom-Up Proteomics
flpsFully-Latent Principal Stratification
FLRFuzzy Logic Rule Classifier
flsaPath Algorithm for the General Fused Lasso Signal Approximator
FluidigmHandling Fluidigm Data
fluidsynthRead and Play Digital Music (MIDI)
FluMoDLInfluenza-Attributable Mortality with Distributed-Lag Models
fluoSurvEstimate Insect Survival from Fluorescence Data
fluxFlux Rate Calculation from Dynamic Closed Chamber Measurements
fluxwebEstimate Energy Fluxes in Food Webs
flyingSimulation of Bird Flight Range
FlyingRSimulation of Bird Flight Range
fmaData Sets from "Forecasting: Methods and Applications" by Makridakis, Wheelwright & Hyndman (1998)
FMAdistFrequentist Model Averaging Distribution
FMATThe Fill-Mask Association Test
fmbasicsFinancial Market Building Blocks
FMCFactorial Experiments with Minimum Level Changes
FMCCSDEfficient Estimation of Clustered Current Status Data
fmcmcA friendly MCMC framework
fmdatesFinancial Market Date Calculations
fmdu(Restricted) [external] Multidimensional Unfolding
FMEA Flexible Modelling Environment for Inverse Modelling, Sensitivity, Identifiability and Monte Carlo Analysis
fmeffectsModel-Agnostic Interpretations with Forward Marginal Effects
fmerPackTools of Heterogeneity Pursuit via Finite Mixture Effects Model
fmesherTriangle Meshes and Related Geometry Tools
fmfFast Class Noise Detector with Multi-Factor-Based Learning
FMMRhythmic Patterns Modeling by FMM Models
FMPFiltered Monotonic Polynomial IRT Models
fmpcloudrR Access to the 'FMP Cloud' and 'Financial Modeling Prep' API
FMradioFactor Modeling for Radiomics Data
fmriAnalysis of fMRI Experiments
fmriqaFunctional MRI Quality Assurance Routines
fMRIscrubScrubbing and Other Data Cleaning Routines for fMRI
fMRItoolsRoutines for Common fMRI Processing Tasks
fmsbFunctions for Medical Statistics Book with some Demographic Data
FMsmsnRegRegression Models with Finite Mixtures of Skew Heavy-Tailed Errors
FMStableFinite Moment Stable Distributions
fmtVariance Estimation of FMT Method (Fully Moderated T-Statistic)
fmtrEasily Apply Formats to Data
fMultivarRmetrics - Modeling of Multivariate Financial Return Distributions
fmxFinite Mixture Parametrization
fnetsFactor-Adjusted Network Estimation and Forecasting for High-Dimensional Time Series
FNNFast Nearest Neighbor Search Algorithms and Applications
fNonlinearRmetrics - Nonlinear and Chaotic Time Series Modelling
FnRInbreeding and Numerator Relationship Coefficients
FOCIFeature Ordering by Conditional Independence
focusedMDSFocused, Interactive Multidimensional Scaling
foghornSummarize CRAN Check Results in the Terminal
foldersStandardized Folder Names
folioDatasets for Teaching Archaeology and Paleontology
fomantic.plusAdd Extra 'Fomantic UI' Components to 'shiny.semantic'
fontawesomeEasily Work with 'Font Awesome' Icons
fontBitstreamVeraFonts with 'Bitstream Vera Fonts' License
fontcmComputer Modern font for use with extrafont package
fontLiberationLiberation Fonts
fontquiverSet of Installed Fonts
foodingraphFood Network Inference and Visualization
foodquotientFood Quotient and Nutrient Analysis for HSFFQ
foodwebWrapperEnhanced Wrapper to Show Which Functions Call What
foolboxFunction Manipulation Toolbox
footballpenaltiesBLPenalties in the German Men's Football Bundesliga
footBayesFitting Bayesian and MLE Football Models
footprintCalculate Air Travel Emissions
foqatField Observation Quick Analysis Toolkit
ForagingOrgOrganization Measures for Visual Foraging
foramsForaminifera and Community Ecology Analyses
forcatsTools for Working with Categorical Variables (Factors)
forceplateProcessing Force-Plate Data
forceRForce Measurement Analyses
foreachProvides Foreach Looping Construct
ForeCAForecastable Component Analysis
forecastForecasting Functions for Time Series and Linear Models
ForecastCombForecast Combination Methods
ForecastCombinationsForecast Combinations
forecasteRTime Series Forecast System
forecastHybridConvenient Functions for Ensemble Time Series Forecasts
forecastLSWForecasting Routines for Locally Stationary Wavelet Processes
forecastMLTime Series Forecasting with Machine Learning Methods
forecastSNSTSForecasting for Stationary and Non-Stationary Time Series
ForecastTBTest Bench for the Comparison of Forecast Methods
FoRecoForecast Reconciliation
ForeCompSize-Power Tradeoff Visualization for Equal Predictive Ability of Two Forecasts
forecThetaForecasting Time Series by Theta Models
foreignRead Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ...
forensicolorsForensic Colors
forensITInformation Theory Tools for Forensic Analysis
foreSIGHTSystems Insights from Generation of Hydroclimatic Timeseries
forestatForest Carbon Sequestration and Potential Productivity Calculation
forestControlApproximate False Positive Rate Control in Selection Frequency for Random Forest
ForestDiscForest Discretization
forestecologyFitting and Assessing Neighborhood Models of the Effect of Interspecific Competition on the Growth of Trees
forestErrorA Unified Framework for Random Forest Prediction Error Estimation
ForestFitStatistical Modelling for Plant Size Distributions
ForestGapRTropical Forest Canopy Gaps Analysis
forestHESForest Health Evaluation System at the Forest Stand Level in China
forestinventoryDesign-Based Global and Small-Area Estimations for Multiphase Forest Inventories
forestlyInteractive Forest Plot
forestmangrForest Mensuration and Management
forestmodelForest Plots from Regression Models
forestplotAdvanced Forest Plot Using 'grid' Graphics
forestploterCreate a Flexible Forest Plot
forestrEcosystem and Canopy Structural Complexity Metrics from LiDAR
forestRKImplements the Forest-R.K. Algorithm for Classification Problems
forestryReshape Data Tree
ForestToolsTools for Analyzing Remote Sensing Forest Data
foretellProjecting Customer Retention Based on Fader and Hardie Probability Models
forgeCasting Values into Shape
forImageForaminiferal Image Analysis and Test Measurement
ForITFunctions to Estimate Tree Volume and Phytomass in the Italian Forest Inventory 2005
formatBibtexFormat BibTeX Entries and Files
formatdownFormatting Numbers in 'rmarkdown' Documents
formatRFormat R Code Automatically
formattableCreate 'Formattable' Data Structures
formattersASCII Formatting for Values and Tables
formods'Shiny' Modules for General Tasks
FormShareA Simple Connection Between the 'FormShare App' and 'R' for Advanced Analytics
FormulaExtended Model Formulas
formula.toolsProgrammatic Utilities for Manipulating Formulas, Expressions, Calls, Assignments and Other R Objects
formulaicDynamic Generation and Quality Checks of Formula Objects
formulopsMathematical Operations on R Formula
FormulRComprehensive Tools for Drug Formulation Analysis and Visualization
forploFlexible Forest Plots
forrelForensic Pedigree Analysis and Relatedness Inference
forsearchDiagnostic Analysis Using Forward Search Procedure for Various Models
forstringrString Manipulation Package for Those Familiar with 'Microsoft Excel'
FORTLSAutomatic Processing of Terrestrial-Based Technologies Point Cloud Data for Forestry Purposes
fortunesR Fortunes
forwardRobust Analysis using Forward Search
forwardsData from Surveys Conducted by Forwards
fossilPalaeoecological and Palaeogeographical Analysis Tools
fossilbrushAutomated Cleaning of Fossil Occurrence Data
FossilSimSimulation of Fossil and Taxonomy Data
FossilSimShinyShiny Application for 'FossilSim'
fotoFourier Transform Textural Ordination
foundry'Palantir Foundry' Software Development Kit
FourgametePFourGamete Test
fourierinComputes Numeric Fourier Integrals
fourPNOBayesian 4 Parameter Item Response Model
FourScoresA Game for Human vs. Human or Human vs. AI
FourWayHMMParsimonious Hidden Markov Models for Four-Way Data
fpaSpatio-Temporal Fixation Pattern Analysis
fPASSPower and Sample Size for Projection Test under Repeated Measures
fpcFlexible Procedures for Clustering
FPCA3DThree Dimensional Functional Component Analysis
fpcbPredictive Confidence Bands for Functional Time Series Forecasting
FPCdpcaThe FPCdpca Criterion on Distributed Principal Component Analysis
fpCompareReliable Comparison of Floating Point Numbers
FPDclusteringPD-Clustering and Related Methods
fpeekCheck Text Files Content at a Glance
fpestEstimating Finite Population Total
FPLdataRead in Fantasy Premier League Data
fplotAutomatic Distribution Graphs Using Formulas
fplyrApply Functions to Blocks of Files
fpopSegmentation using Optimal Partitioning and Function Pruning
fpopwWeighted Segmentation using Functional Pruning and Optimal Partioning
fPortfolioRmetrics - Portfolio Selection and Optimization
fpowComputing the noncentrality parameter of the noncentral F distribution
fppData for "Forecasting: principles and practice"
fpp2Data for "Forecasting: Principles and Practice" (2nd Edition)
fpp3Data for "Forecasting: Principles and Practice" (3rd Edition)
fptdApproxApproximation of First-Passage-Time Densities for Diffusion Processes
FPVTesting Hypotheses via Fuzzy P-Value in Fuzzy Environment
fqacalcCalculate Floristic Quality Assessment Metrics
fqadataContains Regional Floristic Quality Assessment Databases
fqarFloristic Quality Assessment Tools for R
frFrictionless Standards
frabHow to Add Two R Tables
fracdiffFractionally Differenced ARIMA aka ARFIMA(P,d,q) Models
fracdistNumerical CDFs for Fractional Unit Root and Cointegration Tests
FracKrigingRSpatial Multivariate Data Modeling
fracprolifFraction Proliferation via a Quiescent Growth Model
fractaldimEstimation of Fractal Dimensions
FractalParameterEstimationSimulation and Parameter Estimation of Randomized Sierpinski Carpets using the p-p-p-q-Model
fractDEstimation of Fractal Dimension of a Black Area in 2D and 3D (Slices) Images
FRACTIONNumeric Number into Fraction
fractionalVulgar Fractions in R
fractureConvert Decimals to Fractions
fragilityAssessing and Visualizing Fragility of Clinical Results with Binary Outcomes
FragmanFragment Analysis in R
frailtyEMFitting Frailty Models with the EM Algorithm
frailtyHLFrailty Models via Hierarchical Likelihood
frailtyMMpenEfficient Algorithm for High-Dimensional Frailty Model
frailtypackShared, Joint (Generalized) Frailty Models; Surrogate Endpoints
frailtySurvGeneral Semiparametric Shared Frailty Model
frairTools for Functional Response Analysis
framecleanerClean Data Frames
Frames2Estimation in Dual Frame Surveys
francDetect the Language of Text
FRAPOFinancial Risk Modelling and Portfolio Optimisation with R
frapplotAutomatic Data Processing and Visualization for FRAP
frbinomFractional Binomial Distributions
frbsFuzzy Rule-Based Systems for Classification and Regression Tasks
FRCCFast Regularized Canonical Correlation Analysis
frechetStatistical Analysis for Random Objects and Non-Euclidean Data
fredrAn R Client for the 'FRED' API
freeFlexible Regularized Estimating Equations
freealgThe Free Algebra
freebirdEstimation and Inference for High Dimensional Mediation and Surrogate Analysis
freecurrencyapiClient for the 'freecurrencyapi.com' Currency Conversion API
freedomDemonstration of Disease Freedom (DDF)
freegroupThe Free Group
FreeSortRFree Sorting Data Analysis
freesurferWrapper Functions for 'Freesurfer'
freesurferformatsRead and Write 'FreeSurfer' Neuroimaging File Formats
FREEtreeTree Method for High Dimensional Longitudinal Data
freewallA Wrapper of the JavaScript Library 'Freewall'
fRegressionRmetrics - Regression Based Decision and Prediction
frenchCurveGenerate Open or Closed Interpolating Curves
frenchdataDownload Data Sets from Kenneth's French Finance Data Library Site
FREQFREQ: Estimate population size from capture frequencies
freqdistFrequency Distribution
freqdistributionNogivesAutomated Cumulative Frequency Plots for Grouped Distribution
freqdomFrequency Domain Based Analysis: Dynamic PCA
freqdom.fdaFunctional Time Series: Dynamic Functional Principal Components
freqparcoordNovel Methods for Parallel Coordinates
freqpcrEstimates Allele Frequency on qPCR DeltaDeltaCq from Bulk Samples
FreqProfFrequency Profiles Computing and Plotting
freqtablesMake Quick Descriptive Tables for Categorical Variables
frequencyEasy Frequency Tables
frequencyConnectednessSpectral Decomposition of Connectedness Measures
frequentdirectionsImplementation of Frequent-Directions Algorithm for Efficient Matrix Sketching
frequentistSSDScreened Selection Design with Survival Endpoints
frequentistSSDBinaryScreened Selection Design with Binary Endpoints
FRESA.CADFeature Selection Algorithms for Computer Aided Diagnosis
freshCreate Custom 'Bootstrap' Themes to Use in 'Shiny'
FRESHDFast Robust Estimation of Signals in Heterogeneous Data
freshrMake R Environment Fresh Again
FrF2Fractional Factorial Designs with 2-Level Factors
FrF2.catlg128Catalogues of Resolution IV 128 Run 2-Level Fractional Factorials Up to 33 Factors that Do Have 5-Letter Words
FRIRelative Importance of Main and Interaction Effects
frictionlessRead and Write Frictionless Data Packages
friendsThe Entire Transcript from Friends in Tidy Format
fritoolsUtilities for the Forest Research Institute of the State Baden-Wuerttemberg
fritools2Utilities for the Forest Research Institute of the State Baden-Wuerttemberg
FRKFixed Rank Kriging
fRLRFit Repeated Linear Regressions
fromoFast Robust Moments
frontierStochastic Frontier Analysis
frontilesPartial Frontier Efficiency Analysis
frostrR API to MET Norway's 'Frost' API
frothEmulate a 'Forth' Programming Environment
frscoreFunctions for Calculating Fit-Robustness of CNA-Solutions
fruclimadaptEvaluation Tools for Assessing Climate Adaptation of Fruit Tree Species
fsCross-Platform File System Operations Based on 'libuv'
FSASimple Fisheries Stock Assessment Methods
FSAdataData to Support Fish Stock Assessment ('FSA') Package
fsbrainManaging and Visualizing Brain Surface Data
fscacheFile System Cache
fscaretAutomated Feature Selection from 'caret'
FSDAMForward Stepwise Deep Autoencoder-Based Monotone NLDR
fsdaRRobust Data Analysis Through Monitoring and Dynamic Visualization
FSelectorSelecting Attributes
FSelectorRcpp'Rcpp' Implementation of 'FSelector' Entropy-Based Feature Selection Algorithms with a Sparse Matrix Support